RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 FZD1Q9UP38 647 aa21.35■■□□□ 1.01
ITGB4-213ENST00000584939 IL15P40933 162 aaPredicted RBP21.34■■□□□ 1.01
ITGB4-213ENST00000584939 RASA3Q14644 834 aa21.34■■□□□ 1.01
ITGB4-213ENST00000584939 ATP2B3Q16720 1220 aa21.34■■□□□ 1.01
ITGB4-213ENST00000584939 SUPT20HL1Q3ZLR7 823 aa21.34■■□□□ 1.01
ITGB4-213ENST00000584939 LDLRAD1Q5T700 205 aa21.34■■□□□ 1.01
ITGB4-213ENST00000584939 CLUAP1Q96AJ1 413 aa21.34■■□□□ 1.01
ITGB4-213ENST00000584939 COPRSQ9NQ92 184 aa21.34■■□□□ 1.01
ITGB4-213ENST00000584939 PPP1R12BO60237 982 aaPredicted RBP21.33■■□□□ 1.01
ITGB4-213ENST00000584939 HDLBPQ00341 1268 aaKnown RBP21.33■■□□□ 1.01
ITGB4-213ENST00000584939 NBPF12Q5TAG4 269 aaPredicted RBP21.33■■□□□ 1.01
ITGB4-213ENST00000584939 SRGAP3O43295 1099 aa21.32■■□□□ 1
ITGB4-213ENST00000584939 MKRN3Q13064 507 aaKnown RBP21.32■■□□□ 1
ITGB4-213ENST00000584939 TNFAIP1Q13829 316 aa21.32■■□□□ 1
ITGB4-213ENST00000584939 TEKT1Q969V4 418 aa21.32■■□□□ 1
ITGB4-213ENST00000584939 MAP3K11Q16584 847 aa21.31■■□□□ 1
ITGB4-213ENST00000584939 ZKSCAN2Q63HK3 967 aa21.31■■□□□ 1
ITGB4-213ENST00000584939 SUGT1Q9Y2Z0 365 aa21.31■■□□□ 1
ITGB4-213ENST00000584939 TCP10L2B9ZVM9 353 aa21.3■■□□□ 1
ITGB4-213ENST00000584939 MTX1Q13505 466 aa21.3■■□□□ 1
ITGB4-213ENST00000584939 WDR66Q8TBY9 1149 aa21.3■■□□□ 1
ITGB4-213ENST00000584939 SLC10A4Q96EP9 437 aa21.3■■□□□ 1
ITGB4-213ENST00000584939 ABHD8Q96I13 439 aa21.3■■□□□ 1
ITGB4-213ENST00000584939 MRIQ9BWK5 157 aa21.3■■□□□ 1
ITGB4-213ENST00000584939 GNL3LQ9NVN8 582 aaKnown RBP21.3■■□□□ 1
ITGB4-213ENST00000584939 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.3■■□□□ 1
ITGB4-213ENST00000584939 SSC5DA1L4H1 1573 aa21.3■■□□□ 1
ITGB4-213ENST00000584939 MAST3O60307 1309 aa21.29■■□□□ 1
ITGB4-213ENST00000584939 GNAI2P04899 355 aa21.29■■□□□ 1
ITGB4-213ENST00000584939 USP2O75604 605 aaPredicted RBP21.28■■□□□ 1
ITGB4-213ENST00000584939 IREB2P48200 963 aaKnown RBP21.28■■□□□ 1
ITGB4-213ENST00000584939 TM4SF4P48230 202 aa21.28■■□□□ 1
ITGB4-213ENST00000584939 SPRYD7Q5W111 196 aa21.28■■□□□ 1
ITGB4-213ENST00000584939 TMEM57Q8N5G2 664 aa21.28■■□□□ 1
ITGB4-213ENST00000584939 CLMNQ96JQ2 1002 aa21.28■■□□□ 1
ITGB4-213ENST00000584939 ZDHHC15Q96MV8 337 aa21.28■■□□□ 1
ITGB4-213ENST00000584939 ECM29Q5VYK3 1845 aa21.27■■□□□ 1
ITGB4-213ENST00000584939 ARAP2Q8WZ64 1704 aa21.27■■□□□ 1
ITGB4-213ENST00000584939 ADORA1P30542 326 aa21.27■■□□□ 1
ITGB4-213ENST00000584939 PHKA1P46020 1223 aa21.27■■□□□ 1
ITGB4-213ENST00000584939 TNNI2P48788 182 aa21.27■■□□□ 1
ITGB4-213ENST00000584939 HHIPL2Q6UWX4 724 aa21.27■■□□□ 1
ITGB4-213ENST00000584939 TMEM39BQ9GZU3 492 aa21.27■■□□□ 1
ITGB4-213ENST00000584939 UNCXA6NJT0 531 aa21.26■□□□□ 0.99
ITGB4-213ENST00000584939 CACNB3P54284 484 aa21.26■□□□□ 0.99
ITGB4-213ENST00000584939 TIMM10P62072 90 aa21.26■□□□□ 0.99
ITGB4-213ENST00000584939 SREBF2Q12772 1141 aa21.26■□□□□ 0.99
ITGB4-213ENST00000584939 TFCP2Q12800 502 aa21.26■□□□□ 0.99
ITGB4-213ENST00000584939 APOBEC3HQ6NTF7 200 aaKnown RBP21.26■□□□□ 0.99
ITGB4-213ENST00000584939 CDAN1Q8IWY9 1227 aa21.26■□□□□ 0.99
ITGB4-213ENST00000584939 TEPSINQ96N21 525 aa21.26■□□□□ 0.99
ITGB4-213ENST00000584939 SEMA3EO15041 775 aa21.25■□□□□ 0.99
ITGB4-213ENST00000584939 DGKZQ13574 1117 aa21.25■□□□□ 0.99
ITGB4-213ENST00000584939 CCDC102BQ68D86 513 aa21.25■□□□□ 0.99
ITGB4-213ENST00000584939 MCOLN1Q9GZU1 580 aa21.25■□□□□ 0.99
ITGB4-213ENST00000584939 TMOD2Q9NZR1 351 aa21.25■□□□□ 0.99
ITGB4-213ENST00000584939 DENND2AQ9ULE3 1009 aa21.25■□□□□ 0.99
ITGB4-213ENST00000584939 AKAP2Q9Y2D5 859 aa21.25■□□□□ 0.99
ITGB4-213ENST00000584939 PNMA6EA0A0J9YXQ4 647 aa21.24■□□□□ 0.99
ITGB4-213ENST00000584939 ANKRD13AQ8IZ07 590 aa21.24■□□□□ 0.99
ITGB4-213ENST00000584939 WNK4Q96J92 1243 aa21.24■□□□□ 0.99
ITGB4-213ENST00000584939 CASP8AP2Q9UKL3 1982 aa21.23■□□□□ 0.99
ITGB4-213ENST00000584939 A0A1B0GUL7 405 aa21.23■□□□□ 0.99
ITGB4-213ENST00000584939 TBC1D8O95759 1140 aa21.23■□□□□ 0.99
ITGB4-213ENST00000584939 LDHBP07195 334 aaKnown RBP21.23■□□□□ 0.99
ITGB4-213ENST00000584939 PRDX5P30044 214 aa21.23■□□□□ 0.99
ITGB4-213ENST00000584939 MANSC4A6NHS7 340 aaPredicted RBP21.22■□□□□ 0.99
ITGB4-213ENST00000584939 ZBTB48P10074 688 aaPredicted RBP21.22■□□□□ 0.99
ITGB4-213ENST00000584939 DIXDC1Q155Q3 683 aa21.22■□□□□ 0.99
ITGB4-213ENST00000584939 FKBP1CQ5VVH2 108 aa21.22■□□□□ 0.99
ITGB4-213ENST00000584939 FTSJ3Q8IY81 847 aaKnown RBP21.22■□□□□ 0.99
ITGB4-213ENST00000584939 XAGE2Q96GT9 111 aa21.22■□□□□ 0.99
ITGB4-213ENST00000584939 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.22■□□□□ 0.99
ITGB4-213ENST00000584939 SALL1Q9NSC2 1324 aa21.22■□□□□ 0.99
ITGB4-213ENST00000584939 AKAP11Q9UKA4 1901 aa21.21■□□□□ 0.99
ITGB4-213ENST00000584939 CCDC85CA6NKD9 419 aa21.21■□□□□ 0.99
ITGB4-213ENST00000584939 ZBTB22O15209 634 aa21.21■□□□□ 0.99
ITGB4-213ENST00000584939 INHBEP58166 350 aa21.21■□□□□ 0.99
ITGB4-213ENST00000584939 G3BP1Q13283 466 aaKnown RBP eCLIP21.21■□□□□ 0.99
ITGB4-213ENST00000584939 FAM83AQ86UY5 434 aa21.21■□□□□ 0.99
ITGB4-213ENST00000584939 NEUROD6Q96NK8 337 aa21.21■□□□□ 0.99
ITGB4-213ENST00000584939 DAGLAQ9Y4D2 1042 aa21.21■□□□□ 0.99
ITGB4-213ENST00000584939 RASGRF1Q13972 1273 aa21.2■□□□□ 0.98
ITGB4-213ENST00000584939 MVPQ14764 893 aaKnown RBP21.2■□□□□ 0.98
ITGB4-213ENST00000584939 ELP3Q9H9T3 547 aa21.2■□□□□ 0.98
ITGB4-213ENST00000584939 RLBP1P12271 317 aa21.19■□□□□ 0.98
ITGB4-213ENST00000584939 GJA5P36382 358 aa21.19■□□□□ 0.98
ITGB4-213ENST00000584939 MAP3K9P80192 1104 aa21.19■□□□□ 0.98
ITGB4-213ENST00000584939 CDC42EP5Q6NZY7 148 aa21.19■□□□□ 0.98
ITGB4-213ENST00000584939 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.19■□□□□ 0.98
ITGB4-213ENST00000584939 ITPRIPQ8IWB1 547 aa21.19■□□□□ 0.98
ITGB4-213ENST00000584939 ZGPATQ8N5A5 531 aaKnown RBP21.19■□□□□ 0.98
ITGB4-213ENST00000584939 ALDH1A1P00352 501 aa21.18■□□□□ 0.98
ITGB4-213ENST00000584939 ATP8B2P98198 1209 aa21.18■□□□□ 0.98
ITGB4-213ENST00000584939 IFNL1Q8IU54 200 aa21.18■□□□□ 0.98
ITGB4-213ENST00000584939 GPR25O00155 361 aa21.17■□□□□ 0.98
ITGB4-213ENST00000584939 ZBTB7BO15156 539 aaPredicted RBP21.17■□□□□ 0.98
ITGB4-213ENST00000584939 POLA2Q14181 598 aa21.17■□□□□ 0.98
ITGB4-213ENST00000584939 GORABQ5T7V8 394 aa21.17■□□□□ 0.98
ITGB4-213ENST00000584939 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms