RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 MAP3K11Q16584 847 aa20.74■□□□□ 0.91
CSNK1D-225ENST00000584913 HHIPL2Q6UWX4 724 aa20.74■□□□□ 0.91
CSNK1D-225ENST00000584913 DLK2Q6UY11 383 aa20.74■□□□□ 0.91
CSNK1D-225ENST00000584913 ZGPATQ8N5A5 531 aaKnown RBP20.74■□□□□ 0.91
CSNK1D-225ENST00000584913 TEKT1Q969V4 418 aa20.74■□□□□ 0.91
CSNK1D-225ENST00000584913 DEFB129Q9H1M3 183 aa20.74■□□□□ 0.91
CSNK1D-225ENST00000584913 JAG2Q9Y219 1238 aa20.74■□□□□ 0.91
CSNK1D-225ENST00000584913 CHAF1AQ13111 956 aaPredicted RBP20.73■□□□□ 0.91
CSNK1D-225ENST00000584913 G3BP1Q13283 466 aaKnown RBP eCLIP20.73■□□□□ 0.91
CSNK1D-225ENST00000584913 FKBP1CQ5VVH2 108 aa20.73■□□□□ 0.91
CSNK1D-225ENST00000584913 ZDHHC15Q96MV8 337 aa20.73■□□□□ 0.91
CSNK1D-225ENST00000584913 BEGAINQ9BUH8 593 aa20.73■□□□□ 0.91
CSNK1D-225ENST00000584913 RCAN3Q9UKA8 241 aa20.73■□□□□ 0.91
CSNK1D-225ENST00000584913 IQSEC3Q9UPP2 1182 aaPredicted RBP20.73■□□□□ 0.91
CSNK1D-225ENST00000584913 A0A1B0GUL7 405 aa20.72■□□□□ 0.91
CSNK1D-225ENST00000584913 FOXN1O15353 648 aa20.72■□□□□ 0.91
CSNK1D-225ENST00000584913 RBM5P52756 815 aaKnown RBP eCLIP20.72■□□□□ 0.91
CSNK1D-225ENST00000584913 SUPT20HL1Q3ZLR7 823 aa20.72■□□□□ 0.91
CSNK1D-225ENST00000584913 CCDC102BQ68D86 513 aa20.72■□□□□ 0.91
CSNK1D-225ENST00000584913 ARMC9Q7Z3E5 817 aa20.72■□□□□ 0.91
CSNK1D-225ENST00000584913 NOP58Q9Y2X3 529 aaKnown RBP20.72■□□□□ 0.91
CSNK1D-225ENST00000584913 IGSF3O75054 1194 aa20.71■□□□□ 0.91
CSNK1D-225ENST00000584913 ZNF157P51786 506 aaPredicted RBP20.71■□□□□ 0.91
CSNK1D-225ENST00000584913 TFCP2Q12800 502 aa20.71■□□□□ 0.91
CSNK1D-225ENST00000584913 DDX19BQ9UMR2 479 aa20.71■□□□□ 0.91
CSNK1D-225ENST00000584913 RPAP1Q9BWH6 1393 aaPredicted RBP20.71■□□□□ 0.91
CSNK1D-225ENST00000584913 PHKA1P46020 1223 aa20.7■□□□□ 0.9
CSNK1D-225ENST00000584913 TNNI2P48788 182 aa20.7■□□□□ 0.9
CSNK1D-225ENST00000584913 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.7■□□□□ 0.9
CSNK1D-225ENST00000584913 ZNF70Q9UC06 446 aaPredicted RBP20.7■□□□□ 0.9
CSNK1D-225ENST00000584913 SSC5DA1L4H1 1573 aa20.69■□□□□ 0.9
CSNK1D-225ENST00000584913 PDE3AQ14432 1141 aa20.69■□□□□ 0.9
CSNK1D-225ENST00000584913 LDLRAD1Q5T700 205 aa20.69■□□□□ 0.9
CSNK1D-225ENST00000584913 FAM83AQ86UY5 434 aa20.69■□□□□ 0.9
CSNK1D-225ENST00000584913 RASAL3Q86YV0 1011 aa20.69■□□□□ 0.9
CSNK1D-225ENST00000584913 XAGE2Q96GT9 111 aa20.69■□□□□ 0.9
CSNK1D-225ENST00000584913 SAGE1Q9NXZ1 904 aa20.69■□□□□ 0.9
CSNK1D-225ENST00000584913 PCDHAC2Q9Y5I4 1007 aa20.69■□□□□ 0.9
CSNK1D-225ENST00000584913 LAMB1P07942 1786 aa20.69■□□□□ 0.9
CSNK1D-225ENST00000584913 CLRN2A0PK11 232 aa20.68■□□□□ 0.9
CSNK1D-225ENST00000584913 PPP1R12BO60237 982 aaPredicted RBP20.68■□□□□ 0.9
CSNK1D-225ENST00000584913 AOC2O75106 756 aa20.68■□□□□ 0.9
CSNK1D-225ENST00000584913 GRIK5Q16478 980 aa20.68■□□□□ 0.9
CSNK1D-225ENST00000584913 VEZTQ9HBM0 779 aa20.68■□□□□ 0.9
CSNK1D-225ENST00000584913 TMOD2Q9NZR1 351 aa20.68■□□□□ 0.9
CSNK1D-225ENST00000584913 LDHBP07195 334 aaKnown RBP20.67■□□□□ 0.9
CSNK1D-225ENST00000584913 ARID4AP29374 1257 aaPredicted RBP20.67■□□□□ 0.9
CSNK1D-225ENST00000584913 ADORA1P30542 326 aa20.67■□□□□ 0.9
CSNK1D-225ENST00000584913 TIMM10P62072 90 aa20.67■□□□□ 0.9
CSNK1D-225ENST00000584913 GRM1Q13255 1194 aa20.67■□□□□ 0.9
CSNK1D-225ENST00000584913 RASGRF1Q13972 1273 aa20.67■□□□□ 0.9
CSNK1D-225ENST00000584913 RASA3Q14644 834 aa20.67■□□□□ 0.9
CSNK1D-225ENST00000584913 SPTY2D1Q68D10 685 aaPredicted RBP20.67■□□□□ 0.9
CSNK1D-225ENST00000584913 CEP85Q6P2H3 762 aa20.67■□□□□ 0.9
CSNK1D-225ENST00000584913 PANK1Q8TE04 598 aa20.67■□□□□ 0.9
CSNK1D-225ENST00000584913 HOOK2Q96ED9 719 aa20.67■□□□□ 0.9
CSNK1D-225ENST00000584913 TDRD3Q9H7E2 651 aaKnown RBP20.67■□□□□ 0.9
CSNK1D-225ENST00000584913 HSPA8P11142 646 aaKnown RBP20.66■□□□□ 0.9
CSNK1D-225ENST00000584913 APOBEC3HQ6NTF7 200 aaKnown RBP20.66■□□□□ 0.9
CSNK1D-225ENST00000584913 ERC1Q8IUD2 1116 aa20.66■□□□□ 0.9
CSNK1D-225ENST00000584913 SLF2Q8IX21 1173 aa20.66■□□□□ 0.9
CSNK1D-225ENST00000584913 RPAP2Q8IXW5 612 aaPredicted RBP20.66■□□□□ 0.9
CSNK1D-225ENST00000584913 ZNF512BQ96KM6 892 aaPredicted RBP20.66■□□□□ 0.9
CSNK1D-225ENST00000584913 AOX1Q06278 1338 aa20.65■□□□□ 0.9
CSNK1D-225ENST00000584913 UQCRFS1P1P0C7P4 283 aa20.65■□□□□ 0.9
CSNK1D-225ENST00000584913 PRDX5P30044 214 aa20.65■□□□□ 0.9
CSNK1D-225ENST00000584913 TTLL12Q14166 644 aaPredicted RBP20.65■□□□□ 0.9
CSNK1D-225ENST00000584913 HSP90AB4PQ58FF6 505 aa20.65■□□□□ 0.9
CSNK1D-225ENST00000584913 PRAMEF18Q5VWM3 479 aa20.65■□□□□ 0.9
CSNK1D-225ENST00000584913 SCAF8Q9UPN6 1271 aaKnown RBP20.65■□□□□ 0.9
CSNK1D-225ENST00000584913 GAKO14976 1311 aa20.64■□□□□ 0.89
CSNK1D-225ENST00000584913 SURF6O75683 361 aaKnown RBP20.64■□□□□ 0.89
CSNK1D-225ENST00000584913 TNNI3KQ59H18 835 aa20.64■□□□□ 0.89
CSNK1D-225ENST00000584913 COL13A1Q5TAT6 717 aaPredicted RBP20.64■□□□□ 0.89
CSNK1D-225ENST00000584913 FAM163AQ96GL9 167 aaPredicted RBP20.64■□□□□ 0.89
CSNK1D-225ENST00000584913 TEPSINQ96N21 525 aa20.64■□□□□ 0.89
CSNK1D-225ENST00000584913 ZBTB40Q9NUA8 1239 aa20.64■□□□□ 0.89
CSNK1D-225ENST00000584913 FPGT-TNNI3KV9GXZ4 949 aa20.64■□□□□ 0.89
CSNK1D-225ENST00000584913 UBE2Q2LH0YL09 131 aa20.63■□□□□ 0.89
CSNK1D-225ENST00000584913 IREB2P48200 963 aaKnown RBP20.63■□□□□ 0.89
CSNK1D-225ENST00000584913 KIF23Q02241 960 aaPredicted RBP20.63■□□□□ 0.89
CSNK1D-225ENST00000584913 OS9Q13438 667 aaPredicted RBP20.63■□□□□ 0.89
CSNK1D-225ENST00000584913 GORABQ5T7V8 394 aa20.63■□□□□ 0.89
CSNK1D-225ENST00000584913 NEUROD6Q96NK8 337 aa20.63■□□□□ 0.89
CSNK1D-225ENST00000584913 C1orf115Q9H7X2 142 aa20.63■□□□□ 0.89
CSNK1D-225ENST00000584913 ANGEL1Q9UNK9 670 aaKnown RBP20.63■□□□□ 0.89
CSNK1D-225ENST00000584913 DAGLAQ9Y4D2 1042 aa20.63■□□□□ 0.89
CSNK1D-225ENST00000584913 HMMRO75330 724 aa20.62■□□□□ 0.89
CSNK1D-225ENST00000584913 MAP4K4O95819 1239 aaPredicted RBP20.62■□□□□ 0.89
CSNK1D-225ENST00000584913 ZBTB48P10074 688 aaPredicted RBP20.62■□□□□ 0.89
CSNK1D-225ENST00000584913 IFFO2Q5TF58 517 aa20.62■□□□□ 0.89
CSNK1D-225ENST00000584913 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.62■□□□□ 0.89
CSNK1D-225ENST00000584913 CCDC158Q5M9N0 1113 aa20.61■□□□□ 0.89
CSNK1D-225ENST00000584913 NBPF12Q5TAG4 269 aaPredicted RBP20.61■□□□□ 0.89
CSNK1D-225ENST00000584913 MOB2Q70IA6 237 aa20.61■□□□□ 0.89
CSNK1D-225ENST00000584913 ANKRD13AQ8IZ07 590 aa20.61■□□□□ 0.89
CSNK1D-225ENST00000584913 SPATA5Q8NB90 893 aa20.61■□□□□ 0.89
CSNK1D-225ENST00000584913 HMG20BQ9P0W2 317 aa20.61■□□□□ 0.89
CSNK1D-225ENST00000584913 MAST2Q6P0Q8 1798 aa20.6■□□□□ 0.89
CSNK1D-225ENST00000584913 LBX1P52954 281 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms