RNA–Protein interactions for RNA: ENST00000584911.1

LINC00473-205, long intergenic non-protein coding RNA 473, human

TSL 1 (best) BASIC

Gene LINC00473, Length 2,212 nt, Biotype lincRNA, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00473-205	ENST00000584911	GOLGA5	Q8TBA6	731 aa		13.86	□□□□□ -0.19
LINC00473-205	ENST00000584911	SLC4A9	Q96Q91	983 aa		13.86	□□□□□ -0.19
LINC00473-205	ENST00000584911	ZCCHC17	Q9NP64	241 aa	Known RBP	13.86	□□□□□ -0.19
LINC00473-205	ENST00000584911	TNNT3	P45378	269 aa	Predicted RBP	13.86	□□□□□ -0.19
LINC00473-205	ENST00000584911	CABP4	P57796	275 aa		13.86	□□□□□ -0.19
LINC00473-205	ENST00000584911	SMC1A	Q14683	1233 aa	Known RBP	13.86	□□□□□ -0.19
LINC00473-205	ENST00000584911	BLOC1S2	Q6QNY1	142 aa		13.86	□□□□□ -0.19
LINC00473-205	ENST00000584911	SMIM5	Q71RC9	77 aa		13.86	□□□□□ -0.19
LINC00473-205	ENST00000584911	SRL	Q86TD4	932 aa		13.86	□□□□□ -0.19
LINC00473-205	ENST00000584911	EXOC4	Q96A65	974 aa		13.86	□□□□□ -0.19
LINC00473-205	ENST00000584911	CWC15	Q9P013	229 aa	Known RBP	13.86	□□□□□ -0.19
LINC00473-205	ENST00000584911	SCN11A	Q9UI33	1791 aa		13.86	□□□□□ -0.19
LINC00473-205	ENST00000584911		A0A087WWV3	80 aa		13.85	□□□□□ -0.19
LINC00473-205	ENST00000584911	FANCG	O15287	622 aa		13.85	□□□□□ -0.19
LINC00473-205	ENST00000584911	SRGAP3	O43295	1099 aa		13.85	□□□□□ -0.19
LINC00473-205	ENST00000584911	MTHFSD	Q2M296	383 aa	Known RBP	13.85	□□□□□ -0.19
LINC00473-205	ENST00000584911	HSP90AB4P	Q58FF6	505 aa		13.85	□□□□□ -0.19
LINC00473-205	ENST00000584911	BRF1	Q92994	677 aa		13.85	□□□□□ -0.19
LINC00473-205	ENST00000584911	DNAI1	Q9UI46	699 aa		13.85	□□□□□ -0.19
LINC00473-205	ENST00000584911	COL5A3	P25940	1745 aa	Predicted RBP	13.85	□□□□□ -0.19
LINC00473-205	ENST00000584911	CCP110	O43303	1012 aa		13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	SFPQ	P23246	707 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	EVI5L	Q96CN4	794 aa		13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	BPIFA3	Q9BQP9	254 aa		13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	JAK2	O60674	1132 aa		13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	IFIT2	P09913	472 aa	Known RBP	13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	TSGA10IP	Q3SY00	556 aa		13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	AKAP4	Q5JQC9	854 aa		13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	TMC6	Q7Z403	805 aa		13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	C10orf67	Q8IYJ2	551 aa		13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	MNS1	Q8NEH6	495 aa		13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	NLGN2	Q8NFZ4	835 aa		13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	TCEANC2	Q96MN5	208 aa		13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	XPO4	Q9C0E2	1151 aa	Known RBP	13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	NAT10	Q9H0A0	1025 aa	Known RBP	13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	ECHDC1	Q9NTX5	307 aa		13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.84	□□□□□ -0.19
LINC00473-205	ENST00000584911	GNPAT	O15228	680 aa		13.83	□□□□□ -0.2
LINC00473-205	ENST00000584911	CHRM1	P11229	460 aa	Predicted RBP	13.83	□□□□□ -0.2
LINC00473-205	ENST00000584911	FAM160A1	Q05DH4	1040 aa		13.83	□□□□□ -0.2
LINC00473-205	ENST00000584911	GORAB	Q5T7V8	394 aa		13.83	□□□□□ -0.2
LINC00473-205	ENST00000584911	CARD6	Q9BX69	1037 aa		13.83	□□□□□ -0.2
LINC00473-205	ENST00000584911	PARP3	Q9Y6F1	533 aa		13.83	□□□□□ -0.2
LINC00473-205	ENST00000584911	CCDC73	Q6ZRK6	1079 aa		13.83	□□□□□ -0.2
LINC00473-205	ENST00000584911	RRP15	Q9Y3B9	282 aa	Known RBP	13.83	□□□□□ -0.2
LINC00473-205	ENST00000584911	TAF6L	Q9Y6J9	622 aa		13.83	□□□□□ -0.2
LINC00473-205	ENST00000584911	CHD4	Q14839	1912 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	ADAMTS7	Q9UKP4	1686 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	KIN	O60870	393 aa	Known RBP	13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	EVC	P57679	992 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	RC3H1	Q5TC82	1133 aa	Known RBP	13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	HOMER1	Q86YM7	354 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	GPR161	Q8N6U8	529 aa	Known RBP	13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	DDX11	Q96FC9	970 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	FAM227B	Q96M60	508 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	FUT8	Q9BYC5	575 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	CIC	Q96RK0	1608 aa	Predicted RBP	13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	NRDC	O43847	1150 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	STK3	Q13188	491 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	NMI	Q13287	307 aa	Predicted RBP	13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	ICE2	Q659A1	982 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	RNF216	Q9NWF9	866 aa	Predicted RBP	13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	IFNK	Q9P0W0	207 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	ADAM21	Q9UKJ8	722 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	CD2AP	Q9Y5K6	639 aa		13.82	□□□□□ -0.2
LINC00473-205	ENST00000584911	MRC1	P22897	1456 aa		13.81	□□□□□ -0.2
LINC00473-205	ENST00000584911	CNTNAP4	Q9C0A0	1308 aa		13.81	□□□□□ -0.2
LINC00473-205	ENST00000584911	UTRN	P46939	3433 aa		13.81	□□□□□ -0.2
LINC00473-205	ENST00000584911	HIP1	O00291	1037 aa		13.81	□□□□□ -0.2
LINC00473-205	ENST00000584911	ACTN2	P35609	894 aa		13.81	□□□□□ -0.2
LINC00473-205	ENST00000584911	GPR162	Q16538	588 aa		13.81	□□□□□ -0.2
LINC00473-205	ENST00000584911	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.81	□□□□□ -0.2
LINC00473-205	ENST00000584911	RSRC2	Q7L4I2	434 aa	Known RBP	13.81	□□□□□ -0.2
LINC00473-205	ENST00000584911	TEX2	Q8IWB9	1127 aa		13.81	□□□□□ -0.2
LINC00473-205	ENST00000584911	TMX1	Q9H3N1	280 aa		13.81	□□□□□ -0.2
LINC00473-205	ENST00000584911	MED23	Q9ULK4	1368 aa		13.81	□□□□□ -0.2
LINC00473-205	ENST00000584911	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	URI1	O94763	535 aa	Predicted RBP	13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	GYS2	P54840	703 aa		13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	ATL3	Q6DD88	541 aa		13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	CLASRP	Q8N2M8	674 aa	Known RBP	13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	SMARCC2	Q8TAQ2	1214 aa		13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	NECTIN2	Q92692	538 aa		13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	ZFP91	Q96JP5	570 aa	Predicted RBP	13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	LGR6	Q9HBX8	967 aa		13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	HMG20B	Q9P0W2	317 aa		13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	MYH14	Q7Z406	1995 aa	Known RBP	13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911		H3BQV1	296 aa		13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	SMC2	O95347	1197 aa		13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	IFFO2	Q5TF58	517 aa		13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	NAA16	Q6N069	864 aa	Predicted RBP	13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	ZBTB9	Q96C00	473 aa		13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	EPC1	Q9H2F5	836 aa		13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	SLC52A2	Q9HAB3	445 aa		13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	RTCB	Q9Y3I0	505 aa	Known RBP	13.8	□□□□□ -0.2
LINC00473-205	ENST00000584911	TJP1	Q07157	1748 aa		13.79	□□□□□ -0.2
LINC00473-205	ENST00000584911		H3BQF6	201 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms