RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 RFX5P48382 616 aaPredicted RBP25.54■■□□□ 1.68
TOP3A-219ENST00000584887 ZNF296Q8WUU4 475 aaPredicted RBP25.54■■□□□ 1.68
TOP3A-219ENST00000584887 WNK4Q96J92 1243 aa25.54■■□□□ 1.68
TOP3A-219ENST00000584887 API5Q9BZZ5 524 aaKnown RBP25.54■■□□□ 1.68
TOP3A-219ENST00000584887 SIL1Q9H173 461 aa25.54■■□□□ 1.68
TOP3A-219ENST00000584887 MANSC4A6NHS7 340 aaPredicted RBP25.52■■□□□ 1.68
TOP3A-219ENST00000584887 MLLT1Q03111 559 aaPredicted RBP25.52■■□□□ 1.68
TOP3A-219ENST00000584887 TEKT1Q969V4 418 aa25.52■■□□□ 1.68
TOP3A-219ENST00000584887 GPR25O00155 361 aa25.51■■□□□ 1.67
TOP3A-219ENST00000584887 USP2O75604 605 aaPredicted RBP25.51■■□□□ 1.67
TOP3A-219ENST00000584887 FGFR2P21802 821 aa25.51■■□□□ 1.67
TOP3A-219ENST00000584887 TNNI2P48788 182 aa25.51■■□□□ 1.67
TOP3A-219ENST00000584887 CDAN1Q8IWY9 1227 aa25.51■■□□□ 1.67
TOP3A-219ENST00000584887 LRRFIP2Q9Y608 721 aaKnown RBP25.51■■□□□ 1.67
TOP3A-219ENST00000584887 ZBTB48P10074 688 aaPredicted RBP25.5■■□□□ 1.67
TOP3A-219ENST00000584887 CACNB3P54284 484 aa25.5■■□□□ 1.67
TOP3A-219ENST00000584887 TMEM39BQ9GZU3 492 aa25.5■■□□□ 1.67
TOP3A-219ENST00000584887 KIF16BQ96L93 1317 aa25.49■■□□□ 1.67
TOP3A-219ENST00000584887 ATG9AQ7Z3C6 839 aa25.49■■□□□ 1.67
TOP3A-219ENST00000584887 ANKRD13AQ8IZ07 590 aa25.49■■□□□ 1.67
TOP3A-219ENST00000584887 LPIN2Q92539 896 aa25.49■■□□□ 1.67
TOP3A-219ENST00000584887 R3HDMLQ9H3Y0 253 aa25.49■■□□□ 1.67
TOP3A-219ENST00000584887 TMOD2Q9NZR1 351 aa25.49■■□□□ 1.67
TOP3A-219ENST00000584887 MAST3O60307 1309 aa25.48■■□□□ 1.67
TOP3A-219ENST00000584887 ALDH1A1P00352 501 aa25.48■■□□□ 1.67
TOP3A-219ENST00000584887 RARSP54136 660 aaKnown RBP25.48■■□□□ 1.67
TOP3A-219ENST00000584887 SOX10P56693 466 aa25.48■■□□□ 1.67
TOP3A-219ENST00000584887 HDLBPQ00341 1268 aaKnown RBP25.48■■□□□ 1.67
TOP3A-219ENST00000584887 IFNL1Q8IU54 200 aa25.48■■□□□ 1.67
TOP3A-219ENST00000584887 ELP3Q9H9T3 547 aa25.48■■□□□ 1.67
TOP3A-219ENST00000584887 CEP126Q9P2H0 1117 aa25.48■■□□□ 1.67
TOP3A-219ENST00000584887 HDAC5Q9UQL6 1122 aa25.48■■□□□ 1.67
TOP3A-219ENST00000584887 UNCXA6NJT0 531 aa25.47■■□□□ 1.67
TOP3A-219ENST00000584887 FKTNO75072 461 aa25.47■■□□□ 1.67
TOP3A-219ENST00000584887 RGS19P49795 217 aa25.47■■□□□ 1.67
TOP3A-219ENST00000584887 ATP2B3Q16720 1220 aa25.47■■□□□ 1.67
TOP3A-219ENST00000584887 TEPSINQ96N21 525 aa25.47■■□□□ 1.67
TOP3A-219ENST00000584887 MEIS3Q99687 375 aa25.47■■□□□ 1.67
TOP3A-219ENST00000584887 GJA5P36382 358 aa25.46■■□□□ 1.67
TOP3A-219ENST00000584887 INHBEP58166 350 aa25.46■■□□□ 1.67
TOP3A-219ENST00000584887 PA2G4Q9UQ80 394 aaKnown RBP25.46■■□□□ 1.67
TOP3A-219ENST00000584887 IGF2BP3O00425 579 aaKnown RBP eCLIP25.45■■□□□ 1.66
TOP3A-219ENST00000584887 CIAO1O76071 339 aa25.45■■□□□ 1.66
TOP3A-219ENST00000584887 WDR66Q8TBY9 1149 aa25.45■■□□□ 1.66
TOP3A-219ENST00000584887 ZDHHC15Q96MV8 337 aa25.45■■□□□ 1.66
TOP3A-219ENST00000584887 SUGT1Q9Y2Z0 365 aa25.45■■□□□ 1.66
TOP3A-219ENST00000584887 OTOFQ9HC10 1997 aa25.45■■□□□ 1.66
TOP3A-219ENST00000584887 MYH13Q9UKX3 1938 aa25.45■■□□□ 1.66
TOP3A-219ENST00000584887 NOM1Q5C9Z4 860 aaKnown RBP25.44■■□□□ 1.66
TOP3A-219ENST00000584887 OPTNQ96CV9 577 aa25.44■■□□□ 1.66
TOP3A-219ENST00000584887 HPS5Q9UPZ3 1129 aa25.44■■□□□ 1.66
TOP3A-219ENST00000584887 PKN2Q16513 984 aaKnown RBP25.43■■□□□ 1.66
TOP3A-219ENST00000584887 CFHR5Q9BXR6 569 aa25.43■■□□□ 1.66
TOP3A-219ENST00000584887 GNL3LQ9NVN8 582 aaKnown RBP25.43■■□□□ 1.66
TOP3A-219ENST00000584887 FBXO3Q9UK99 471 aa25.43■■□□□ 1.66
TOP3A-219ENST00000584887 CSADQ9Y600 493 aa25.43■■□□□ 1.66
TOP3A-219ENST00000584887 IL15P40933 162 aaPredicted RBP25.42■■□□□ 1.66
TOP3A-219ENST00000584887 OTUD7BQ6GQQ9 843 aa25.42■■□□□ 1.66
TOP3A-219ENST00000584887 APOBEC3HQ6NTF7 200 aaKnown RBP25.42■■□□□ 1.66
TOP3A-219ENST00000584887 MAP3K9P80192 1104 aa25.41■■□□□ 1.66
TOP3A-219ENST00000584887 VGLL4Q14135 290 aa25.41■■□□□ 1.66
TOP3A-219ENST00000584887 HHIPL2Q6UWX4 724 aa25.41■■□□□ 1.66
TOP3A-219ENST00000584887 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.41■■□□□ 1.66
TOP3A-219ENST00000584887 CNKSR2Q8WXI2 1034 aa25.41■■□□□ 1.66
TOP3A-219ENST00000584887 MRIQ9BWK5 157 aa25.4■■□□□ 1.66
TOP3A-219ENST00000584887 GNAI3P08754 354 aa25.39■■□□□ 1.66
TOP3A-219ENST00000584887 PHKA1P46020 1223 aa25.39■■□□□ 1.66
TOP3A-219ENST00000584887 DIXDC1Q155Q3 683 aa25.39■■□□□ 1.66
TOP3A-219ENST00000584887 INTS3Q68E01 1043 aaKnown RBP25.39■■□□□ 1.66
TOP3A-219ENST00000584887 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.39■■□□□ 1.66
TOP3A-219ENST00000584887 ARHGAP45Q92619 1136 aa25.39■■□□□ 1.66
TOP3A-219ENST00000584887 FRAT1Q92837 279 aaPredicted RBP25.39■■□□□ 1.66
TOP3A-219ENST00000584887 LDHBP07195 334 aaKnown RBP25.38■■□□□ 1.65
TOP3A-219ENST00000584887 PRDX5P30044 214 aa25.38■■□□□ 1.65
TOP3A-219ENST00000584887 ADORA1P30542 326 aa25.38■■□□□ 1.65
TOP3A-219ENST00000584887 CRHR2Q13324 411 aa25.38■■□□□ 1.65
TOP3A-219ENST00000584887 FBXO46Q6PJ61 603 aaPredicted RBP25.38■■□□□ 1.65
TOP3A-219ENST00000584887 OTUD5Q96G74 571 aa25.38■■□□□ 1.65
TOP3A-219ENST00000584887 COPRSQ9NQ92 184 aa25.38■■□□□ 1.65
TOP3A-219ENST00000584887 DAGLAQ9Y4D2 1042 aa25.38■■□□□ 1.65
TOP3A-219ENST00000584887 IPO8O15397 1037 aaKnown RBP25.37■■□□□ 1.65
TOP3A-219ENST00000584887 SRGAP3O43295 1099 aa25.37■■□□□ 1.65
TOP3A-219ENST00000584887 FKBP1CQ5VVH2 108 aa25.37■■□□□ 1.65
TOP3A-219ENST00000584887 FAM83AQ86UY5 434 aa25.37■■□□□ 1.65
TOP3A-219ENST00000584887 WRNIP1Q96S55 665 aa25.37■■□□□ 1.65
TOP3A-219ENST00000584887 DENND2AQ9ULE3 1009 aa25.37■■□□□ 1.65
TOP3A-219ENST00000584887 HOOK2Q96ED9 719 aa25.36■■□□□ 1.65
TOP3A-219ENST00000584887 PTPN18Q99952 460 aa25.36■■□□□ 1.65
TOP3A-219ENST00000584887 TNNQ9UQP3 1299 aa25.36■■□□□ 1.65
TOP3A-219ENST00000584887 TRIM17Q9Y577 477 aa25.36■■□□□ 1.65
TOP3A-219ENST00000584887 CCL15-CCL14A0A0B4J2E2 113 aa25.35■■□□□ 1.65
TOP3A-219ENST00000584887 BCAR3O75815 825 aa25.35■■□□□ 1.65
TOP3A-219ENST00000584887 TRIM27P14373 513 aa25.35■■□□□ 1.65
TOP3A-219ENST00000584887 TCP10Q12799 353 aa25.35■■□□□ 1.65
TOP3A-219ENST00000584887 CCL15Q16663 113 aa25.35■■□□□ 1.65
TOP3A-219ENST00000584887 DCAF15Q66K64 600 aa25.35■■□□□ 1.65
TOP3A-219ENST00000584887 BRI3BPQ8WY22 251 aa25.35■■□□□ 1.65
TOP3A-219ENST00000584887 CLUAP1Q96AJ1 413 aa25.35■■□□□ 1.65
TOP3A-219ENST00000584887 LAMB1P07942 1786 aa25.35■■□□□ 1.65
TOP3A-219ENST00000584887 TESPA1A2RU30 521 aaPredicted RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms