RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 HIP1O00291 1037 aa22.14■■□□□ 1.13
RFFL-211ENST00000584541 RPS12P25398 132 aaKnown RBP22.14■■□□□ 1.13
RFFL-211ENST00000584541 DPY19L2Q6NUT2 758 aa22.14■■□□□ 1.13
RFFL-211ENST00000584541 TMED8Q6PL24 325 aaPredicted RBP22.14■■□□□ 1.13
RFFL-211ENST00000584541 SLF2Q8IX21 1173 aa22.14■■□□□ 1.13
RFFL-211ENST00000584541 CERS5Q8N5B7 392 aa22.14■■□□□ 1.13
RFFL-211ENST00000584541 GSTO1P78417 241 aa22.13■■□□□ 1.13
RFFL-211ENST00000584541 SLC9C2Q5TAH2 1124 aa22.13■■□□□ 1.13
RFFL-211ENST00000584541 GPC2Q8N158 579 aa22.13■■□□□ 1.13
RFFL-211ENST00000584541 TTF2Q9UNY4 1162 aaKnown RBP22.13■■□□□ 1.13
RFFL-211ENST00000584541 F8W031 263 aaPredicted RBP22.12■■□□□ 1.13
RFFL-211ENST00000584541 MECOMQ03112 1051 aa22.12■■□□□ 1.13
RFFL-211ENST00000584541 NAA16Q6N069 864 aaPredicted RBP22.12■■□□□ 1.13
RFFL-211ENST00000584541 CASC1Q6TDU7 716 aa22.12■■□□□ 1.13
RFFL-211ENST00000584541 KIAA0825Q8IV33 1275 aa22.12■■□□□ 1.13
RFFL-211ENST00000584541 MAGEB6Q8N7X4 407 aa22.12■■□□□ 1.13
RFFL-211ENST00000584541 DIAPH3Q9NSV4 1193 aa22.12■■□□□ 1.13
RFFL-211ENST00000584541 HDAC9Q9UKV0 1011 aa22.12■■□□□ 1.13
RFFL-211ENST00000584541 RNF113AO15541 343 aaKnown RBP22.11■■□□□ 1.13
RFFL-211ENST00000584541 LDHCP07864 332 aa22.11■■□□□ 1.13
RFFL-211ENST00000584541 ADD2P35612 726 aa22.11■■□□□ 1.13
RFFL-211ENST00000584541 OGFOD1Q8N543 542 aa22.11■■□□□ 1.13
RFFL-211ENST00000584541 NSUN4Q96CB9 384 aaKnown RBP22.11■■□□□ 1.13
RFFL-211ENST00000584541 ZBTB12Q9Y330 459 aaPredicted RBP22.11■■□□□ 1.13
RFFL-211ENST00000584541 CDC45O75419 566 aa22.1■■□□□ 1.13
RFFL-211ENST00000584541 PDE6AP16499 860 aa22.1■■□□□ 1.13
RFFL-211ENST00000584541 MMP14P50281 582 aa22.1■■□□□ 1.13
RFFL-211ENST00000584541 UBE3CQ15386 1083 aa22.1■■□□□ 1.13
RFFL-211ENST00000584541 GRIK5Q16478 980 aa22.1■■□□□ 1.13
RFFL-211ENST00000584541 GMLQ99445 158 aa22.1■■□□□ 1.13
RFFL-211ENST00000584541 USP17L8P0C7I0 530 aa22.09■■□□□ 1.13
RFFL-211ENST00000584541 CYP7A1P22680 504 aa22.09■■□□□ 1.13
RFFL-211ENST00000584541 GMPSP49915 693 aaPredicted RBP22.09■■□□□ 1.13
RFFL-211ENST00000584541 DPF2Q92785 391 aa22.09■■□□□ 1.13
RFFL-211ENST00000584541 ZNF532Q9HCE3 1301 aa22.08■■□□□ 1.13
RFFL-211ENST00000584541 HDLBPQ00341 1268 aaKnown RBP22.08■■□□□ 1.13
RFFL-211ENST00000584541 IFFO2Q5TF58 517 aa22.08■■□□□ 1.13
RFFL-211ENST00000584541 RUFY2Q8WXA3 655 aa22.08■■□□□ 1.13
RFFL-211ENST00000584541 APPBP2Q92624 585 aa22.08■■□□□ 1.13
RFFL-211ENST00000584541 TEKT1Q969V4 418 aa22.08■■□□□ 1.13
RFFL-211ENST00000584541 NOL10Q9BSC4 688 aaKnown RBP22.08■■□□□ 1.13
RFFL-211ENST00000584541 UTRNP46939 3433 aa22.08■■□□□ 1.12
RFFL-211ENST00000584541 DDNO94850 711 aaPredicted RBP22.07■■□□□ 1.12
RFFL-211ENST00000584541 CHMLP26374 656 aa22.07■■□□□ 1.12
RFFL-211ENST00000584541 SCNN1DP51172 638 aa22.07■■□□□ 1.12
RFFL-211ENST00000584541 MRIQ9BWK5 157 aa22.07■■□□□ 1.12
RFFL-211ENST00000584541 SERPINA10Q9UK55 444 aa22.07■■□□□ 1.12
RFFL-211ENST00000584541 GLTPD2A6NH11 291 aa22.06■■□□□ 1.12
RFFL-211ENST00000584541 LMOD1P29536 600 aaPredicted RBP22.06■■□□□ 1.12
RFFL-211ENST00000584541 RBM5P52756 815 aaKnown RBP eCLIP22.06■■□□□ 1.12
RFFL-211ENST00000584541 DIXDC1Q155Q3 683 aa22.06■■□□□ 1.12
RFFL-211ENST00000584541 HHIPL2Q6UWX4 724 aa22.06■■□□□ 1.12
RFFL-211ENST00000584541 MROH7-TTC4A0A0A0MT08 1334 aa22.06■■□□□ 1.12
RFFL-211ENST00000584541 ADAMTSL1Q8N6G6 1762 aa22.05■■□□□ 1.12
RFFL-211ENST00000584541 TCRBV5S4A2TA0A5A2 114 aa22.05■■□□□ 1.12
RFFL-211ENST00000584541 H7C1D1 291 aa22.05■■□□□ 1.12
RFFL-211ENST00000584541 CRKP46108 304 aa22.05■■□□□ 1.12
RFFL-211ENST00000584541 NMIQ13287 307 aaPredicted RBP22.05■■□□□ 1.12
RFFL-211ENST00000584541 ZMYM1Q5SVZ6 1142 aa22.05■■□□□ 1.12
RFFL-211ENST00000584541 CWC27Q6UX04 472 aaKnown RBP22.05■■□□□ 1.12
RFFL-211ENST00000584541 FAM163AQ96GL9 167 aaPredicted RBP22.05■■□□□ 1.12
RFFL-211ENST00000584541 HELLSQ9NRZ9 838 aa22.05■■□□□ 1.12
RFFL-211ENST00000584541 CNOT7Q9UIV1 285 aaKnown RBP22.05■■□□□ 1.12
RFFL-211ENST00000584541 BAG3O95817 575 aa22.04■■□□□ 1.12
RFFL-211ENST00000584541 CERS3Q8IU89 383 aa22.04■■□□□ 1.12
RFFL-211ENST00000584541 MICALL2Q8IY33 904 aa22.04■■□□□ 1.12
RFFL-211ENST00000584541 ZNF384Q8TF68 577 aa22.04■■□□□ 1.12
RFFL-211ENST00000584541 GPRC5DQ9NZD1 345 aa22.04■■□□□ 1.12
RFFL-211ENST00000584541 GAKO14976 1311 aa22.04■■□□□ 1.12
RFFL-211ENST00000584541 SCN4AP35499 1836 aa22.03■■□□□ 1.12
RFFL-211ENST00000584541 CFAP100Q494V2 611 aa22.03■■□□□ 1.12
RFFL-211ENST00000584541 SLFNL1Q499Z3 407 aa22.03■■□□□ 1.12
RFFL-211ENST00000584541 MCMDC2Q4G0Z9 681 aa22.03■■□□□ 1.12
RFFL-211ENST00000584541 AIDAQ96BJ3 306 aa22.03■■□□□ 1.12
RFFL-211ENST00000584541 FAM227BQ96M60 508 aa22.03■■□□□ 1.12
RFFL-211ENST00000584541 ZDHHC15Q96MV8 337 aa22.03■■□□□ 1.12
RFFL-211ENST00000584541 DAGLAQ9Y4D2 1042 aa22.03■■□□□ 1.12
RFFL-211ENST00000584541 ECM29Q5VYK3 1845 aa22.03■■□□□ 1.12
RFFL-211ENST00000584541 RAD50Q92878 1312 aa22.03■■□□□ 1.12
RFFL-211ENST00000584541 MAGEB6P1A0A0J9YX57 407 aa22.02■■□□□ 1.12
RFFL-211ENST00000584541 CHGBP05060 677 aa22.02■■□□□ 1.12
RFFL-211ENST00000584541 MFAP1P55081 439 aaKnown RBP22.02■■□□□ 1.12
RFFL-211ENST00000584541 ZNF280AP59817 542 aaPredicted RBP22.02■■□□□ 1.12
RFFL-211ENST00000584541 DLGAP5Q15398 846 aa22.02■■□□□ 1.12
RFFL-211ENST00000584541 ADGRA1Q86SQ6 560 aa22.02■■□□□ 1.12
RFFL-211ENST00000584541 MYOZ2Q9NPC6 264 aa22.02■■□□□ 1.12
RFFL-211ENST00000584541 WDR90Q96KV7 1748 aa22.01■■□□□ 1.11
RFFL-211ENST00000584541 GPR75-ASB3A0A0A6YYF3 556 aa22.01■■□□□ 1.11
RFFL-211ENST00000584541 A0A0D9SFI3 127 aa22.01■■□□□ 1.11
RFFL-211ENST00000584541 PLCG2P16885 1265 aa22.01■■□□□ 1.11
RFFL-211ENST00000584541 BTDP43251 543 aa22.01■■□□□ 1.11
RFFL-211ENST00000584541 MIGA1Q8NAN2 632 aa22.01■■□□□ 1.11
RFFL-211ENST00000584541 OSBP2Q969R2 916 aa22.01■■□□□ 1.11
RFFL-211ENST00000584541 L3MBTL3Q96JM7 780 aaPredicted RBP22.01■■□□□ 1.11
RFFL-211ENST00000584541 PUS7LQ9H0K6 701 aaKnown RBP22.01■■□□□ 1.11
RFFL-211ENST00000584541 AATFQ9NY61 560 aaKnown RBP eCLIP22.01■■□□□ 1.11
RFFL-211ENST00000584541 EIF5BO60841 1220 aaKnown RBP22■■□□□ 1.11
RFFL-211ENST00000584541 MTMR14Q8NCE2 650 aa22■■□□□ 1.11
RFFL-211ENST00000584541 SEC62Q99442 399 aaKnown RBP22■■□□□ 1.11
RFFL-211ENST00000584541 IQCA1LA6NCM1 817 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms