RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 TCF20Q9UGU0 1960 aaKnown RBP8.2□□□□□ -1.1
CTC1-212ENST00000584439 BDP1A6H8Y1 2624 aa8.19□□□□□ -1.1
CTC1-212ENST00000584439 U2SURPO15042 1029 aaKnown RBP8.19□□□□□ -1.1
CTC1-212ENST00000584439 EVI5O60447 810 aa8.19□□□□□ -1.1
CTC1-212ENST00000584439 PDIA6Q15084 440 aa8.19□□□□□ -1.1
CTC1-212ENST00000584439 PROSER3Q2NL68 480 aa8.19□□□□□ -1.1
CTC1-212ENST00000584439 PARP10Q53GL7 1025 aa8.19□□□□□ -1.1
CTC1-212ENST00000584439 NLRP10Q86W26 655 aa8.19□□□□□ -1.1
CTC1-212ENST00000584439 FAM177A1Q8N128 213 aaPredicted RBP8.19□□□□□ -1.1
CTC1-212ENST00000584439 MS4A4AQ96JQ5 239 aa8.19□□□□□ -1.1
CTC1-212ENST00000584439 REPIN1Q9BWE0 567 aaKnown RBP8.19□□□□□ -1.1
CTC1-212ENST00000584439 ZC3H12CQ9C0D7 883 aaKnown RBP8.19□□□□□ -1.1
CTC1-212ENST00000584439 TSPYL2Q9H2G4 693 aaPredicted RBP8.19□□□□□ -1.1
CTC1-212ENST00000584439 ZMYND8Q9ULU4 1186 aaPredicted RBP8.19□□□□□ -1.1
CTC1-212ENST00000584439 PCDHAC2Q9Y5I4 1007 aa8.19□□□□□ -1.1
CTC1-212ENST00000584439 RPTORQ8N122 1335 aa8.19□□□□□ -1.1
CTC1-212ENST00000584439 SPDYE16A6NNV3 312 aaPredicted RBP8.18□□□□□ -1.1
CTC1-212ENST00000584439 FARP2O94887 1054 aaPredicted RBP8.18□□□□□ -1.1
CTC1-212ENST00000584439 BRD1O95696 1058 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 CCL5P13501 91 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 BMP8BP34820 402 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 MAP3K11Q16584 847 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 CCDC27Q2M243 656 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 LRIT3Q3SXY7 679 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 FAM43AQ8N2R8 423 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 PROCA1Q8NCQ7 364 aaPredicted RBP8.18□□□□□ -1.1
CTC1-212ENST00000584439 BRI3BPQ8WY22 251 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 EYA3Q99504 573 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 KNSTRNQ9Y448 316 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 FARP1Q9Y4F1 1045 aaPredicted RBP8.18□□□□□ -1.1
CTC1-212ENST00000584439 MYH3P11055 1940 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 AOX1Q06278 1338 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 NCOR1O75376 2440 aa8.18□□□□□ -1.1
CTC1-212ENST00000584439 SPDYE5A6NIY4 337 aa8.17□□□□□ -1.1
CTC1-212ENST00000584439 G3V3G9 751 aa8.17□□□□□ -1.1
CTC1-212ENST00000584439 UFL1O94874 794 aa8.17□□□□□ -1.1
CTC1-212ENST00000584439 GJB1P08034 283 aa8.17□□□□□ -1.1
CTC1-212ENST00000584439 SYN1P17600 705 aa8.17□□□□□ -1.1
CTC1-212ENST00000584439 PRKAR2BP31323 418 aa8.17□□□□□ -1.1
CTC1-212ENST00000584439 TAF1CQ15572 869 aaPredicted RBP8.17□□□□□ -1.1
CTC1-212ENST00000584439 TMC4Q7Z404 712 aa8.17□□□□□ -1.1
CTC1-212ENST00000584439 RNF208Q9H0X6 261 aa8.17□□□□□ -1.1
CTC1-212ENST00000584439 EMILIN3Q9NT22 766 aa8.17□□□□□ -1.1
CTC1-212ENST00000584439 TRMT112Q9UI30 125 aaKnown RBP8.17□□□□□ -1.1
CTC1-212ENST00000584439 ARAP2Q8WZ64 1704 aa8.17□□□□□ -1.1
CTC1-212ENST00000584439 USP17L3A6NCW0 530 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 USP17L4A6NCW7 530 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 UNCXA6NJT0 531 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 USP2O75604 605 aaPredicted RBP8.16□□□□□ -1.1
CTC1-212ENST00000584439 CD44P16070 742 aaKnown RBP8.16□□□□□ -1.1
CTC1-212ENST00000584439 LACTBP83111 547 aaPredicted RBP8.16□□□□□ -1.1
CTC1-212ENST00000584439 SKIV2LQ15477 1246 aaKnown RBP8.16□□□□□ -1.1
CTC1-212ENST00000584439 RTL5Q5HYW3 569 aaPredicted RBP8.16□□□□□ -1.1
CTC1-212ENST00000584439 DACT2Q5SW24 774 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 PPP1R15BQ5SWA1 713 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 CC2D1BQ5T0F9 858 aaKnown RBP8.16□□□□□ -1.1
CTC1-212ENST00000584439 NBPF12Q5TAG4 269 aaPredicted RBP8.16□□□□□ -1.1
CTC1-212ENST00000584439 OTUD7BQ6GQQ9 843 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 USP17L1Q7RTZ2 530 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 C7orf61Q8IZ16 206 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 ZNF579Q8NAF0 562 aaKnown RBP8.16□□□□□ -1.1
CTC1-212ENST00000584439 SH3TC1Q8TE82 1336 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 DIS3LQ8TF46 1054 aaKnown RBP8.16□□□□□ -1.1
CTC1-212ENST00000584439 U2AF1L4Q8WU68 220 aaKnown RBP8.16□□□□□ -1.1
CTC1-212ENST00000584439 FAM122AQ96E09 287 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 UNC93B1Q9H1C4 597 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 ELP3Q9H9T3 547 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 SEC31BQ9NQW1 1179 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 IRS2Q9Y4H2 1338 aa8.16□□□□□ -1.1
CTC1-212ENST00000584439 MYO9BQ13459 2157 aa8.15□□□□□ -1.1
CTC1-212ENST00000584439 A0A1B0GUL6 1792 aa8.15□□□□□ -1.1
CTC1-212ENST00000584439 POTEB2H3BUK9 544 aa8.15□□□□□ -1.1
CTC1-212ENST00000584439 MAGEA10P43363 369 aaPredicted RBP8.15□□□□□ -1.1
CTC1-212ENST00000584439 EIF4A1P60842 406 aaKnown RBP8.15□□□□□ -1.1
CTC1-212ENST00000584439 TAF7Q15545 349 aaPredicted RBP8.15□□□□□ -1.1
CTC1-212ENST00000584439 TDHQ8IZJ6 230 aa8.15□□□□□ -1.1
CTC1-212ENST00000584439 OPTNQ96CV9 577 aa8.15□□□□□ -1.1
CTC1-212ENST00000584439 FAM89AQ96GI7 184 aa8.15□□□□□ -1.1
CTC1-212ENST00000584439 ZBED3Q96IU2 234 aaPredicted RBP8.15□□□□□ -1.1
CTC1-212ENST00000584439 TRIM47Q96LD4 638 aa8.15□□□□□ -1.1
CTC1-212ENST00000584439 DEFB129Q9H1M3 183 aa8.15□□□□□ -1.1
CTC1-212ENST00000584439 ZFYVE28Q9HCC9 887 aa8.15□□□□□ -1.1
CTC1-212ENST00000584439 SNRKQ9NRH2 765 aa8.15□□□□□ -1.1
CTC1-212ENST00000584439 RIPOR2Q9Y4F9 1068 aa8.15□□□□□ -1.1
CTC1-212ENST00000584439 SGPL1O95470 568 aa8.14□□□□□ -1.11
CTC1-212ENST00000584439 OSBPP22059 807 aa8.14□□□□□ -1.11
CTC1-212ENST00000584439 GRK4P32298 578 aa8.14□□□□□ -1.11
CTC1-212ENST00000584439 RPS8P62241 208 aaKnown RBP8.14□□□□□ -1.11
CTC1-212ENST00000584439 SF3B3Q15393 1217 aaKnown RBP8.14□□□□□ -1.11
CTC1-212ENST00000584439 APOBEC3FQ8IUX4 373 aaKnown RBP8.14□□□□□ -1.11
CTC1-212ENST00000584439 CDAN1Q8IWY9 1227 aa8.14□□□□□ -1.11
CTC1-212ENST00000584439 NKX2-3Q8TAU0 364 aa8.14□□□□□ -1.11
CTC1-212ENST00000584439 PAWRQ96IZ0 340 aaKnown RBP8.14□□□□□ -1.11
CTC1-212ENST00000584439 CALR3Q96L12 384 aaKnown RBP8.14□□□□□ -1.11
CTC1-212ENST00000584439 ANKIB1Q9P2G1 1089 aa8.14□□□□□ -1.11
CTC1-212ENST00000584439 GGA1Q9UJY5 639 aa8.14□□□□□ -1.11
CTC1-212ENST00000584439 IVNS1ABPQ9Y6Y0 642 aa8.14□□□□□ -1.11
CTC1-212ENST00000584439 LTBP2Q14767 1821 aa8.14□□□□□ -1.11
CTC1-212ENST00000584439 FRMPD3Q5JV73 1810 aa8.14□□□□□ -1.11
CTC1-212ENST00000584439 COL2A1P02458 1487 aaPredicted RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms