RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 COL1A1P02452 1464 aaPredicted RBP33.5■■■□□ 2.95
SMARCD2-210ENST00000584400 TNFAIP1Q13829 316 aa33.49■■■□□ 2.95
SMARCD2-210ENST00000584400 HMMRO75330 724 aa33.48■■■□□ 2.95
SMARCD2-210ENST00000584400 CYP4F22Q6NT55 531 aa33.48■■■□□ 2.95
SMARCD2-210ENST00000584400 DEFB129Q9H1M3 183 aa33.48■■■□□ 2.95
SMARCD2-210ENST00000584400 VEZTQ9HBM0 779 aa33.48■■■□□ 2.95
SMARCD2-210ENST00000584400 SCAF8Q9UPN6 1271 aaKnown RBP33.48■■■□□ 2.95
SMARCD2-210ENST00000584400 PDS5AQ29RF7 1337 aaKnown RBP33.48■■■□□ 2.95
SMARCD2-210ENST00000584400 SALL1Q9NSC2 1324 aa33.48■■■□□ 2.95
SMARCD2-210ENST00000584400 CLRN2A0PK11 232 aa33.47■■■□□ 2.95
SMARCD2-210ENST00000584400 GRIK5Q16478 980 aa33.47■■■□□ 2.95
SMARCD2-210ENST00000584400 HSP90AB4PQ58FF6 505 aa33.47■■■□□ 2.95
SMARCD2-210ENST00000584400 ERC1Q8IUD2 1116 aa33.47■■■□□ 2.95
SMARCD2-210ENST00000584400 PCDHAC2Q9Y5I4 1007 aa33.47■■■□□ 2.95
SMARCD2-210ENST00000584400 ARAP2Q8WZ64 1704 aa33.46■■■□□ 2.95
SMARCD2-210ENST00000584400 GRM1Q13255 1194 aa33.46■■■□□ 2.95
SMARCD2-210ENST00000584400 LDHBP07195 334 aaKnown RBP33.45■■■□□ 2.95
SMARCD2-210ENST00000584400 SPDYE2Q495Y8 402 aa33.45■■■□□ 2.95
SMARCD2-210ENST00000584400 HHIPL2Q6UWX4 724 aa33.45■■■□□ 2.95
SMARCD2-210ENST00000584400 ZDHHC15Q96MV8 337 aa33.45■■■□□ 2.95
SMARCD2-210ENST00000584400 MAP2K2P36507 400 aa33.44■■■□□ 2.94
SMARCD2-210ENST00000584400 TNNI3KQ59H18 835 aa33.44■■■□□ 2.94
SMARCD2-210ENST00000584400 RGMBQ6NW40 437 aa33.44■■■□□ 2.94
SMARCD2-210ENST00000584400 TDRD3Q9H7E2 651 aaKnown RBP33.44■■■□□ 2.94
SMARCD2-210ENST00000584400 ZNF70Q9UC06 446 aaPredicted RBP33.44■■■□□ 2.94
SMARCD2-210ENST00000584400 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.44■■■□□ 2.94
SMARCD2-210ENST00000584400 FPGT-TNNI3KV9GXZ4 949 aa33.44■■■□□ 2.94
SMARCD2-210ENST00000584400 UQCRFS1P1P0C7P4 283 aa33.43■■■□□ 2.94
SMARCD2-210ENST00000584400 HSPA1AP0DMV8 641 aaKnown RBP33.43■■■□□ 2.94
SMARCD2-210ENST00000584400 HSPA1BP0DMV9 641 aaKnown RBP33.43■■■□□ 2.94
SMARCD2-210ENST00000584400 TNNI2P48788 182 aa33.43■■■□□ 2.94
SMARCD2-210ENST00000584400 MAP2K1Q02750 393 aaPredicted RBP33.43■■■□□ 2.94
SMARCD2-210ENST00000584400 RASGRF1Q13972 1273 aa33.43■■■□□ 2.94
SMARCD2-210ENST00000584400 PRAMEF18Q5VWM3 479 aa33.43■■■□□ 2.94
SMARCD2-210ENST00000584400 CCDC102AQ96A19 550 aa33.43■■■□□ 2.94
SMARCD2-210ENST00000584400 POLR2AP24928 1970 aaKnown RBP33.43■■■□□ 2.94
SMARCD2-210ENST00000584400 TTLL12Q14166 644 aaPredicted RBP33.42■■■□□ 2.94
SMARCD2-210ENST00000584400 SUPT20HL1Q3ZLR7 823 aa33.42■■■□□ 2.94
SMARCD2-210ENST00000584400 CCDC158Q5M9N0 1113 aa33.42■■■□□ 2.94
SMARCD2-210ENST00000584400 C20orf194Q5TEA3 1177 aa33.42■■■□□ 2.94
SMARCD2-210ENST00000584400 SPTY2D1Q68D10 685 aaPredicted RBP33.42■■■□□ 2.94
SMARCD2-210ENST00000584400 TMOD2Q9NZR1 351 aa33.42■■■□□ 2.94
SMARCD2-210ENST00000584400 AIDAQ96BJ3 306 aa33.41■■■□□ 2.94
SMARCD2-210ENST00000584400 NOGQ13253 232 aa33.4■■■□□ 2.94
SMARCD2-210ENST00000584400 ARMC9Q7Z3E5 817 aa33.4■■■□□ 2.94
SMARCD2-210ENST00000584400 ARID4AP29374 1257 aaPredicted RBP33.39■■■□□ 2.94
SMARCD2-210ENST00000584400 PRDX5P30044 214 aa33.39■■■□□ 2.94
SMARCD2-210ENST00000584400 ZNF157P51786 506 aaPredicted RBP33.39■■■□□ 2.94
SMARCD2-210ENST00000584400 RASA3Q14644 834 aa33.39■■■□□ 2.94
SMARCD2-210ENST00000584400 SLF2Q8IX21 1173 aa33.39■■■□□ 2.94
SMARCD2-210ENST00000584400 SPATA5Q8NB90 893 aa33.38■■■□□ 2.93
SMARCD2-210ENST00000584400 ABCF2Q9UG63 623 aa33.38■■■□□ 2.93
SMARCD2-210ENST00000584400 EXOC6BQ9Y2D4 811 aa33.38■■■□□ 2.93
SMARCD2-210ENST00000584400 PAPPA2Q9BXP8 1791 aa33.37■■■□□ 2.93
SMARCD2-210ENST00000584400 TTC39AQ5SRH9 613 aa33.37■■■□□ 2.93
SMARCD2-210ENST00000584400 APOBEC3HQ6NTF7 200 aaKnown RBP33.37■■■□□ 2.93
SMARCD2-210ENST00000584400 BEGAINQ9BUH8 593 aa33.37■■■□□ 2.93
SMARCD2-210ENST00000584400 AOX1Q06278 1338 aa33.36■■■□□ 2.93
SMARCD2-210ENST00000584400 PPP1R12BO60237 982 aaPredicted RBP33.36■■■□□ 2.93
SMARCD2-210ENST00000584400 DZIP1Q86YF9 867 aaKnown RBP33.36■■■□□ 2.93
SMARCD2-210ENST00000584400 HMG20BQ9P0W2 317 aa33.36■■■□□ 2.93
SMARCD2-210ENST00000584400 FKBP1CQ5VVH2 108 aa33.35■■■□□ 2.93
SMARCD2-210ENST00000584400 DBNDD2Q9BQY9 259 aa33.35■■■□□ 2.93
SMARCD2-210ENST00000584400 WBP1LQ9NX94 342 aa33.35■■■□□ 2.93
SMARCD2-210ENST00000584400 MYH13Q9UKX3 1938 aa33.34■■■□□ 2.93
SMARCD2-210ENST00000584400 TCP10L2B9ZVM9 353 aa33.34■■■□□ 2.93
SMARCD2-210ENST00000584400 ERICH6Q7L0X2 663 aa33.34■■■□□ 2.93
SMARCD2-210ENST00000584400 ECM29Q5VYK3 1845 aa33.34■■■□□ 2.93
SMARCD2-210ENST00000584400 AOC2O75106 756 aa33.33■■■□□ 2.93
SMARCD2-210ENST00000584400 RRP1P56182 461 aaKnown RBP33.33■■■□□ 2.93
SMARCD2-210ENST00000584400 KIF1BPQ96EK5 621 aa33.33■■■□□ 2.93
SMARCD2-210ENST00000584400 ZNF512BQ96KM6 892 aaPredicted RBP33.33■■■□□ 2.93
SMARCD2-210ENST00000584400 DAGLAQ9Y4D2 1042 aa33.33■■■□□ 2.93
SMARCD2-210ENST00000584400 UBE2Q2LH0YL09 131 aa33.32■■■□□ 2.92
SMARCD2-210ENST00000584400 RAB11FIP3O75154 756 aa33.32■■■□□ 2.92
SMARCD2-210ENST00000584400 DIXDC1Q155Q3 683 aa33.32■■■□□ 2.92
SMARCD2-210ENST00000584400 SIRT2Q8IXJ6 389 aa33.32■■■□□ 2.92
SMARCD2-210ENST00000584400 MOB2Q70IA6 237 aa33.31■■■□□ 2.92
SMARCD2-210ENST00000584400 FAM83AQ86UY5 434 aa33.31■■■□□ 2.92
SMARCD2-210ENST00000584400 RHPN1Q8TCX5 695 aa33.31■■■□□ 2.92
SMARCD2-210ENST00000584400 EAF2Q96CJ1 260 aaPredicted RBP33.31■■■□□ 2.92
SMARCD2-210ENST00000584400 ANGEL1Q9UNK9 670 aaKnown RBP33.31■■■□□ 2.92
SMARCD2-210ENST00000584400 UNCXA6NJT0 531 aa33.3■■■□□ 2.92
SMARCD2-210ENST00000584400 SLC10A3P09131 477 aa33.3■■■□□ 2.92
SMARCD2-210ENST00000584400 MCAMP43121 646 aa33.3■■■□□ 2.92
SMARCD2-210ENST00000584400 PRKG1Q13976 671 aa33.3■■■□□ 2.92
SMARCD2-210ENST00000584400 NBPF12Q5TAG4 269 aaPredicted RBP33.3■■■□□ 2.92
SMARCD2-210ENST00000584400 CLASRPQ8N2M8 674 aaKnown RBP33.3■■■□□ 2.92
SMARCD2-210ENST00000584400 CCDC8Q9H0W5 538 aaPredicted RBP33.3■■■□□ 2.92
SMARCD2-210ENST00000584400 DBNLQ9UJU6 430 aaKnown RBP33.3■■■□□ 2.92
SMARCD2-210ENST00000584400 THSD7BQ9C0I4 1608 aa33.29■■■□□ 2.92
SMARCD2-210ENST00000584400 FAM155AB1AL88 458 aaPredicted RBP33.29■■■□□ 2.92
SMARCD2-210ENST00000584400 GSTO1P78417 241 aa33.29■■■□□ 2.92
SMARCD2-210ENST00000584400 MAP3K11Q16584 847 aa33.29■■■□□ 2.92
SMARCD2-210ENST00000584400 HOOK2Q96ED9 719 aa33.29■■■□□ 2.92
SMARCD2-210ENST00000584400 IGSF3O75054 1194 aa33.28■■■□□ 2.92
SMARCD2-210ENST00000584400 AACSQ86V21 672 aa33.28■■■□□ 2.92
SMARCD2-210ENST00000584400 REM2Q8IYK8 340 aaPredicted RBP33.28■■■□□ 2.92
SMARCD2-210ENST00000584400 FAM163AQ96GL9 167 aaPredicted RBP33.28■■■□□ 2.92
SMARCD2-210ENST00000584400 LDHCP07864 332 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms