RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 NEDD4P46934 1319 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 PDS5AQ29RF7 1337 aaKnown RBP6.52□□□□□ -1.37
CRLF3-204ENST00000583527 PNPLA7Q6ZV29 1317 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 WDR19Q8NEZ3 1342 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 VPS37CA5D8V6 355 aaPredicted RBP6.52□□□□□ -1.37
CRLF3-204ENST00000583527 NPHP1O15259 732 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 STX6O43752 255 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 TRIM37O94972 964 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 F13A1P00488 732 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 ZSCAN22P10073 491 aaPredicted RBP6.52□□□□□ -1.37
CRLF3-204ENST00000583527 GJB2P29033 226 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 GYG1P46976 350 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 BCAMP50895 628 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 CLCN6P51797 869 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 DDR1Q08345 913 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 MAP3K12Q12852 859 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 UBE4AQ14139 1066 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 IMMTQ16891 758 aaKnown RBP6.52□□□□□ -1.37
CRLF3-204ENST00000583527 ZNF827Q17R98 1081 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 KLHL40Q2TBA0 621 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 PRR5LQ6MZQ0 368 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 Q6ZUG5 572 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 CDC37L1Q7L3B6 337 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 SLC51AQ86UW1 340 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 MB21D2Q8IYB1 491 aaPredicted RBP6.52□□□□□ -1.37
CRLF3-204ENST00000583527 MAGEB6Q8N7X4 407 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 BRF1Q92994 677 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 AIDAQ96BJ3 306 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 LRRC2Q9BYS8 371 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 GZF1Q9H116 711 aaPredicted RBP6.52□□□□□ -1.37
CRLF3-204ENST00000583527 QTRT2Q9H974 415 aaKnown RBP6.52□□□□□ -1.37
CRLF3-204ENST00000583527 BSDC1Q9NW68 430 aaPredicted RBP6.52□□□□□ -1.37
CRLF3-204ENST00000583527 CTNNA3Q9UI47 895 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 MTMR6Q9Y217 621 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 MYH1P12882 1939 aa6.52□□□□□ -1.37
CRLF3-204ENST00000583527 IRS2Q9Y4H2 1338 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 FSD2A1L4K1 749 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 GOLGA8BA8MQT2 603 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 SEMA3EO15041 775 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 JAK2O60674 1132 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 DTNBO60941 627 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 GYS1P13807 737 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 SYT1P21579 422 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 ANTXR2P58335 489 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 RBM6P78332 1123 aaKnown RBP6.51□□□□□ -1.37
CRLF3-204ENST00000583527 ST5P78524 1137 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 FGD1P98174 961 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 STK3Q13188 491 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 GRAPQ13588 217 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 SKOR2Q2VWA4 1001 aaPredicted RBP6.51□□□□□ -1.37
CRLF3-204ENST00000583527 TRAPPC3LQ5T215 181 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 ZNF772Q68DY9 489 aaPredicted RBP6.51□□□□□ -1.37
CRLF3-204ENST00000583527 DHX32Q7L7V1 743 aaKnown RBP6.51□□□□□ -1.37
CRLF3-204ENST00000583527 RALYLQ86SE5 291 aaKnown RBP6.51□□□□□ -1.37
CRLF3-204ENST00000583527 LCORLQ8N3X6 602 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 TMEM87AQ8NBN3 555 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 GRAPLQ8TC17 118 aaPredicted RBP6.51□□□□□ -1.37
CRLF3-204ENST00000583527 NLRP3Q96P20 1036 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 AGXT2Q9BYV1 514 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 ANKRD2Q9GZV1 360 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 ARMT1Q9H993 441 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 LMBRD1Q9NUN5 540 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 GNL3LQ9NVN8 582 aaKnown RBP6.51□□□□□ -1.37
CRLF3-204ENST00000583527 PCDH10Q9P2E7 1040 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 MINPP1Q9UNW1 487 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 IQSEC3Q9UPP2 1182 aaPredicted RBP6.51□□□□□ -1.37
CRLF3-204ENST00000583527 NID2Q14112 1375 aa6.51□□□□□ -1.37
CRLF3-204ENST00000583527 SALL1Q9NSC2 1324 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 SCN9AQ15858 1988 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 PTPDC1A2A3K4 754 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 FIBPO43427 364 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 PRC1O43663 620 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 PFKFB2O60825 505 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 MBD3O95983 291 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 FGAP02671 866 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 PDCP20941 246 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 APOBRQ0VD83 1088 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 SCRN1Q12765 414 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 TXNRD1Q16881 649 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 CRY2Q49AN0 593 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 LCE2DQ5TA82 110 aaPredicted RBP6.5□□□□□ -1.37
CRLF3-204ENST00000583527 TPTE2Q6XPS3 522 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 ADGRA1Q86SQ6 560 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 ZNF579Q8NAF0 562 aaKnown RBP6.5□□□□□ -1.37
CRLF3-204ENST00000583527 NSUN7Q8NE18 718 aaKnown RBP6.5□□□□□ -1.37
CRLF3-204ENST00000583527 STRBPQ96SI9 672 aaKnown RBP6.5□□□□□ -1.37
CRLF3-204ENST00000583527 DDX49Q9Y6V7 483 aaKnown RBP6.5□□□□□ -1.37
CRLF3-204ENST00000583527 KIF13BQ9NQT8 1826 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 XDHP47989 1333 aa6.5□□□□□ -1.37
CRLF3-204ENST00000583527 WTIPA6NIX2 430 aaPredicted RBP6.49□□□□□ -1.37
CRLF3-204ENST00000583527 POLRMTO00411 1230 aaKnown RBP6.49□□□□□ -1.37
CRLF3-204ENST00000583527 SH2B2O14492 632 aaPredicted RBP6.49□□□□□ -1.37
CRLF3-204ENST00000583527 MCM5P33992 734 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 TDO2P48775 406 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 RPS8P62241 208 aaKnown RBP6.49□□□□□ -1.37
CRLF3-204ENST00000583527 EXOSC10Q01780 885 aaKnown RBP6.49□□□□□ -1.37
CRLF3-204ENST00000583527 ALX1Q15699 326 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 FOXD4L6Q3SYB3 417 aaPredicted RBP6.49□□□□□ -1.37
CRLF3-204ENST00000583527 CAVIN4Q5BKX8 364 aa6.49□□□□□ -1.37
CRLF3-204ENST00000583527 L1TD1Q5T7N2 865 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms