RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 GPBP1L1Q9HC44 474 aaPredicted RBP15.87■□□□□ 0.13
ERBB2-215ENST00000583391 PIH1D3Q9NQM4 214 aaKnown RBP15.87■□□□□ 0.13
ERBB2-215ENST00000583391 HDAC9Q9UKV0 1011 aa15.87■□□□□ 0.13
ERBB2-215ENST00000583391 POTECB2RU33 542 aa15.86■□□□□ 0.13
ERBB2-215ENST00000583391 GLRX3O76003 335 aaKnown RBP15.86■□□□□ 0.13
ERBB2-215ENST00000583391 MAP4K4O95819 1239 aaPredicted RBP15.86■□□□□ 0.13
ERBB2-215ENST00000583391 ERICH6Q7L0X2 663 aa15.86■□□□□ 0.13
ERBB2-215ENST00000583391 DZIP1Q86YF9 867 aaKnown RBP15.86■□□□□ 0.13
ERBB2-215ENST00000583391 OGFOD1Q8N543 542 aa15.86■□□□□ 0.13
ERBB2-215ENST00000583391 PAG1Q9NWQ8 432 aa15.86■□□□□ 0.13
ERBB2-215ENST00000583391 RAI14Q9P0K7 980 aa15.86■□□□□ 0.13
ERBB2-215ENST00000583391 STAP2Q9UGK3 403 aa15.86■□□□□ 0.13
ERBB2-215ENST00000583391 MAST3O60307 1309 aa15.86■□□□□ 0.13
ERBB2-215ENST00000583391 AOX1Q06278 1338 aa15.86■□□□□ 0.13
ERBB2-215ENST00000583391 H7C1D1 291 aa15.85■□□□□ 0.13
ERBB2-215ENST00000583391 EGFRP00533 1210 aa15.85■□□□□ 0.13
ERBB2-215ENST00000583391 EPHX2P34913 555 aa15.85■□□□□ 0.13
ERBB2-215ENST00000583391 ZNF280AP59817 542 aaPredicted RBP15.85■□□□□ 0.13
ERBB2-215ENST00000583391 TBC1D10BQ4KMP7 808 aaPredicted RBP15.85■□□□□ 0.13
ERBB2-215ENST00000583391 SPTY2D1Q68D10 685 aaPredicted RBP15.85■□□□□ 0.13
ERBB2-215ENST00000583391 SAMD7Q7Z3H4 446 aa15.85■□□□□ 0.13
ERBB2-215ENST00000583391 ZNF784Q8NCA9 323 aaPredicted RBP15.85■□□□□ 0.13
ERBB2-215ENST00000583391 TRPM4Q8TD43 1214 aa15.85■□□□□ 0.13
ERBB2-215ENST00000583391 ADARB2Q9NS39 739 aaKnown RBP15.85■□□□□ 0.13
ERBB2-215ENST00000583391 LRP2BPQ9P2M1 347 aa15.85■□□□□ 0.13
ERBB2-215ENST00000583391 SUGT1Q9Y2Z0 365 aa15.85■□□□□ 0.13
ERBB2-215ENST00000583391 IDH1O75874 414 aaKnown RBP15.84■□□□□ 0.13
ERBB2-215ENST00000583391 VEGFAP15692 232 aaPredicted RBP15.84■□□□□ 0.13
ERBB2-215ENST00000583391 TTF1Q15361 905 aaPredicted RBP15.84■□□□□ 0.13
ERBB2-215ENST00000583391 DIXDC1Q155Q3 683 aa15.84■□□□□ 0.13
ERBB2-215ENST00000583391 KIF4BQ2VIQ3 1234 aa15.84■□□□□ 0.13
ERBB2-215ENST00000583391 RBM26Q5T8P6 1007 aaKnown RBP15.84■□□□□ 0.13
ERBB2-215ENST00000583391 TAF1DQ9H5J8 278 aaPredicted RBP15.84■□□□□ 0.13
ERBB2-215ENST00000583391 MYOZ2Q9NPC6 264 aa15.84■□□□□ 0.13
ERBB2-215ENST00000583391 NAV1Q8NEY1 1877 aa15.84■□□□□ 0.13
ERBB2-215ENST00000583391 RBM5P52756 815 aaKnown RBP eCLIP15.83■□□□□ 0.12
ERBB2-215ENST00000583391 CFAP100Q494V2 611 aa15.83■□□□□ 0.12
ERBB2-215ENST00000583391 EAPPQ56P03 285 aaPredicted RBP15.83■□□□□ 0.12
ERBB2-215ENST00000583391 OSBPL3Q9H4L5 887 aa15.83■□□□□ 0.12
ERBB2-215ENST00000583391 PCDHAC2Q9Y5I4 1007 aa15.83■□□□□ 0.12
ERBB2-215ENST00000583391 GTF3C3Q9Y5Q9 886 aa15.83■□□□□ 0.12
ERBB2-215ENST00000583391 CRKP46108 304 aa15.82■□□□□ 0.12
ERBB2-215ENST00000583391 RGS3P49796 1198 aa15.82■□□□□ 0.12
ERBB2-215ENST00000583391 MECOMQ03112 1051 aa15.82■□□□□ 0.12
ERBB2-215ENST00000583391 TEKT1Q969V4 418 aa15.82■□□□□ 0.12
ERBB2-215ENST00000583391 NSUN4Q96CB9 384 aaKnown RBP15.82■□□□□ 0.12
ERBB2-215ENST00000583391 SERPINA10Q9UK55 444 aa15.82■□□□□ 0.12
ERBB2-215ENST00000583391 TRPM7Q96QT4 1865 aa15.82■□□□□ 0.12
ERBB2-215ENST00000583391 MYH1P12882 1939 aa15.82■□□□□ 0.12
ERBB2-215ENST00000583391 MAP3K12Q12852 859 aa15.81■□□□□ 0.12
ERBB2-215ENST00000583391 DLGAP5Q15398 846 aa15.81■□□□□ 0.12
ERBB2-215ENST00000583391 NAA16Q6N069 864 aaPredicted RBP15.81■□□□□ 0.12
ERBB2-215ENST00000583391 ZNF384Q8TF68 577 aa15.81■□□□□ 0.12
ERBB2-215ENST00000583391 BAZ2AQ9UIF9 1905 aaKnown RBP15.81■□□□□ 0.12
ERBB2-215ENST00000583391 DAGLAQ9Y4D2 1042 aa15.81■□□□□ 0.12
ERBB2-215ENST00000583391 MROH7-TTC4A0A0A0MT08 1334 aa15.8■□□□□ 0.12
ERBB2-215ENST00000583391 ASTN2O75129 1339 aaPredicted RBP15.8■□□□□ 0.12
ERBB2-215ENST00000583391 TRIM6-TRIM34B2RNG4 842 aa15.8■□□□□ 0.12
ERBB2-215ENST00000583391 POTEIP0CG38 1075 aa15.8■□□□□ 0.12
ERBB2-215ENST00000583391 POTEJP0CG39 1038 aa15.8■□□□□ 0.12
ERBB2-215ENST00000583391 MMP14P50281 582 aa15.8■□□□□ 0.12
ERBB2-215ENST00000583391 HDLBPQ00341 1268 aaKnown RBP15.8■□□□□ 0.12
ERBB2-215ENST00000583391 TTC22Q5TAA0 569 aa15.8■□□□□ 0.12
ERBB2-215ENST00000583391 USP50Q70EL3 339 aaPredicted RBP15.8■□□□□ 0.12
ERBB2-215ENST00000583391 MAGEB6Q8N7X4 407 aa15.8■□□□□ 0.12
ERBB2-215ENST00000583391 FSD1Q9BTV5 496 aa15.8■□□□□ 0.12
ERBB2-215ENST00000583391 GAKO14976 1311 aa15.79■□□□□ 0.12
ERBB2-215ENST00000583391 SPDYE2BA6NHP3 402 aa15.79■□□□□ 0.12
ERBB2-215ENST00000583391 WNT10BO00744 389 aa15.79■□□□□ 0.12
ERBB2-215ENST00000583391 KIF3CO14782 793 aa15.79■□□□□ 0.12
ERBB2-215ENST00000583391 SPDYE6P0CI01 402 aa15.79■□□□□ 0.12
ERBB2-215ENST00000583391 GSPT1P15170 499 aaKnown RBP15.79■□□□□ 0.12
ERBB2-215ENST00000583391 PDE6AP16499 860 aa15.79■□□□□ 0.12
ERBB2-215ENST00000583391 HIRAP54198 1017 aaPredicted RBP15.79■□□□□ 0.12
ERBB2-215ENST00000583391 GSTO1P78417 241 aa15.79■□□□□ 0.12
ERBB2-215ENST00000583391 NBPF9Q3BBW0 867 aa15.79■□□□□ 0.12
ERBB2-215ENST00000583391 HHIPL2Q6UWX4 724 aa15.79■□□□□ 0.12
ERBB2-215ENST00000583391 PNMA8AQ86V59 439 aaPredicted RBP15.79■□□□□ 0.12
ERBB2-215ENST00000583391 SLF2Q8IX21 1173 aa15.79■□□□□ 0.12
ERBB2-215ENST00000583391 KBTBD3Q8NAB2 608 aa15.79■□□□□ 0.12
ERBB2-215ENST00000583391 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.79■□□□□ 0.12
ERBB2-215ENST00000583391 DDX60LQ5H9U9 1706 aaKnown RBP15.78■□□□□ 0.12
ERBB2-215ENST00000583391 SLC9C2Q5TAH2 1124 aa15.78■□□□□ 0.12
ERBB2-215ENST00000583391 ADGRA1Q86SQ6 560 aa15.78■□□□□ 0.12
ERBB2-215ENST00000583391 CNTROBQ8N137 903 aa15.78■□□□□ 0.12
ERBB2-215ENST00000583391 MTMR14Q8NCE2 650 aa15.78■□□□□ 0.12
ERBB2-215ENST00000583391 RILPL2Q969X0 211 aa15.78■□□□□ 0.12
ERBB2-215ENST00000583391 ZBED3Q96IU2 234 aaPredicted RBP15.78■□□□□ 0.12
ERBB2-215ENST00000583391 ZDHHC15Q96MV8 337 aa15.78■□□□□ 0.12
ERBB2-215ENST00000583391 GGA3Q9NZ52 723 aa15.78■□□□□ 0.12
ERBB2-215ENST00000583391 CLEC11AQ9Y240 323 aa15.78■□□□□ 0.12
ERBB2-215ENST00000583391 LAMB1P07942 1786 aa15.77■□□□□ 0.12
ERBB2-215ENST00000583391 ZNF532Q9HCE3 1301 aa15.77■□□□□ 0.12
ERBB2-215ENST00000583391 MYH8P13535 1937 aa15.77■□□□□ 0.12
ERBB2-215ENST00000583391 CLRN2A0PK11 232 aa15.77■□□□□ 0.12
ERBB2-215ENST00000583391 CHGBP05060 677 aa15.77■□□□□ 0.12
ERBB2-215ENST00000583391 LDHCP07864 332 aa15.77■□□□□ 0.12
ERBB2-215ENST00000583391 CYP7A1P22680 504 aa15.77■□□□□ 0.12
ERBB2-215ENST00000583391 ADD2P35612 726 aa15.77■□□□□ 0.12
ERBB2-215ENST00000583391 BTDP43251 543 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms