RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 JDP2Q8WYK2 163 aa19.77■□□□□ 0.76
CDK5RAP3-228ENST00000583363 TAF1DQ9H5J8 278 aaPredicted RBP19.77■□□□□ 0.76
CDK5RAP3-228ENST00000583363 LRP2BPQ9P2M1 347 aa19.77■□□□□ 0.76
CDK5RAP3-228ENST00000583363 PASKQ96RG2 1323 aa19.76■□□□□ 0.75
CDK5RAP3-228ENST00000583363 ZNF541Q9H0D2 1346 aa19.76■□□□□ 0.75
CDK5RAP3-228ENST00000583363 COL4A5P29400 1685 aa19.76■□□□□ 0.75
CDK5RAP3-228ENST00000583363 RNF113AO15541 343 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-228ENST00000583363 IDH1O75874 414 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-228ENST00000583363 MAP3K12Q12852 859 aa19.76■□□□□ 0.75
CDK5RAP3-228ENST00000583363 LRRFIP1Q32MZ4 808 aaKnown RBP19.76■□□□□ 0.75
CDK5RAP3-228ENST00000583363 C8orf34Q49A92 452 aa19.76■□□□□ 0.75
CDK5RAP3-228ENST00000583363 DACT2Q5SW24 774 aa19.76■□□□□ 0.75
CDK5RAP3-228ENST00000583363 ZSCAN25Q6NSZ9 544 aa19.76■□□□□ 0.75
CDK5RAP3-228ENST00000583363 LDHDQ86WU2 507 aa19.76■□□□□ 0.75
CDK5RAP3-228ENST00000583363 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.76■□□□□ 0.753e-14■■□□□ 11.9
CDK5RAP3-228ENST00000583363 CNTNAP1P78357 1384 aa19.75■□□□□ 0.75
CDK5RAP3-228ENST00000583363 RFX7Q2KHR2 1363 aa19.75■□□□□ 0.75
CDK5RAP3-228ENST00000583363 ZFYP08048 801 aaPredicted RBP19.75■□□□□ 0.75
CDK5RAP3-228ENST00000583363 ADD2P35612 726 aa19.75■□□□□ 0.75
CDK5RAP3-228ENST00000583363 GRIK5Q16478 980 aa19.75■□□□□ 0.75
CDK5RAP3-228ENST00000583363 MFSD14BQ5SR56 506 aa19.75■□□□□ 0.75
CDK5RAP3-228ENST00000583363 FBXW7Q969H0 707 aa19.75■□□□□ 0.75
CDK5RAP3-228ENST00000583363 RAI14Q9P0K7 980 aa19.75■□□□□ 0.75
CDK5RAP3-228ENST00000583363 SUGT1Q9Y2Z0 365 aa19.75■□□□□ 0.75
CDK5RAP3-228ENST00000583363 FZD9O00144 591 aa19.74■□□□□ 0.75
CDK5RAP3-228ENST00000583363 CHGBP05060 677 aa19.74■□□□□ 0.75
CDK5RAP3-228ENST00000583363 LDHBP07195 334 aaKnown RBP19.74■□□□□ 0.75
CDK5RAP3-228ENST00000583363 VIL1P09327 827 aaKnown RBP19.74■□□□□ 0.75
CDK5RAP3-228ENST00000583363 UBE3CQ15386 1083 aa19.74■□□□□ 0.75
CDK5RAP3-228ENST00000583363 SLC9C2Q5TAH2 1124 aa19.74■□□□□ 0.75
CDK5RAP3-228ENST00000583363 CERS5Q8N5B7 392 aa19.74■□□□□ 0.75
CDK5RAP3-228ENST00000583363 MXD3Q9BW11 206 aa19.74■□□□□ 0.75
CDK5RAP3-228ENST00000583363 ADAMTSL1Q8N6G6 1762 aa19.74■□□□□ 0.75
CDK5RAP3-228ENST00000583363 MYH13Q9UKX3 1938 aa19.74■□□□□ 0.75
CDK5RAP3-228ENST00000583363 TCRBV5S4A2TA0A5A2 114 aa19.73■□□□□ 0.75
CDK5RAP3-228ENST00000583363 RAD17O75943 681 aa19.73■□□□□ 0.75
CDK5RAP3-228ENST00000583363 ITGBL1O95965 494 aaPredicted RBP19.73■□□□□ 0.75
CDK5RAP3-228ENST00000583363 PDE6AP16499 860 aa19.73■□□□□ 0.75
CDK5RAP3-228ENST00000583363 PRDX5P30044 214 aa19.73■□□□□ 0.75
CDK5RAP3-228ENST00000583363 CXCL9Q07325 125 aa19.73■□□□□ 0.75
CDK5RAP3-228ENST00000583363 SLFNL1Q499Z3 407 aa19.73■□□□□ 0.75
CDK5RAP3-228ENST00000583363 CASC1Q6TDU7 716 aa19.73■□□□□ 0.75
CDK5RAP3-228ENST00000583363 MAGEB6Q8N7X4 407 aa19.73■□□□□ 0.75
CDK5RAP3-228ENST00000583363 NSUN4Q96CB9 384 aaKnown RBP19.73■□□□□ 0.75
CDK5RAP3-228ENST00000583363 DIAPH3Q9NSV4 1193 aa19.73■□□□□ 0.75
CDK5RAP3-228ENST00000583363 SCN9AQ15858 1988 aa19.73■□□□□ 0.75
CDK5RAP3-228ENST00000583363 AK9Q5TCS8 1911 aa19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 PSMD14O00487 310 aa19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 MECOMQ03112 1051 aa19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 NMIQ13287 307 aaPredicted RBP19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 ZMYM1Q5SVZ6 1142 aa19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 TMED8Q6PL24 325 aaPredicted RBP19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 CWC27Q6UX04 472 aaKnown RBP19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 ZNF384Q8TF68 577 aa19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 FAM227BQ96M60 508 aa19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 BACH2Q9BYV9 841 aa19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 HELLSQ9NRZ9 838 aa19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 MYO5AQ9Y4I1 1855 aaKnown RBP19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 ZNF532Q9HCE3 1301 aa19.72■□□□□ 0.75
CDK5RAP3-228ENST00000583363 FOXN1O15353 648 aa19.71■□□□□ 0.75
CDK5RAP3-228ENST00000583363 EAPPQ56P03 285 aaPredicted RBP19.71■□□□□ 0.75
CDK5RAP3-228ENST00000583363 CIAPIN1Q6FI81 312 aa19.71■□□□□ 0.75
CDK5RAP3-228ENST00000583363 RSBN1LQ6PCB5 846 aaPredicted RBP19.71■□□□□ 0.75
CDK5RAP3-228ENST00000583363 RUFY2Q8WXA3 655 aa19.71■□□□□ 0.75
CDK5RAP3-228ENST00000583363 ESYT1Q9BSJ8 1104 aa19.71■□□□□ 0.75
CDK5RAP3-228ENST00000583363 CYP7A1P22680 504 aa19.7■□□□□ 0.74
CDK5RAP3-228ENST00000583363 EIF6P56537 245 aaKnown RBP19.7■□□□□ 0.74
CDK5RAP3-228ENST00000583363 TNIP1Q15025 636 aa19.7■□□□□ 0.74
CDK5RAP3-228ENST00000583363 MCMDC2Q4G0Z9 681 aa19.7■□□□□ 0.74
CDK5RAP3-228ENST00000583363 NAA16Q6N069 864 aaPredicted RBP19.7■□□□□ 0.74
CDK5RAP3-228ENST00000583363 APPBP2Q92624 585 aa19.7■□□□□ 0.74
CDK5RAP3-228ENST00000583363 OSBP2Q969R2 916 aa19.7■□□□□ 0.74
CDK5RAP3-228ENST00000583363 HACL1Q9UJ83 578 aa19.7■□□□□ 0.74
CDK5RAP3-228ENST00000583363 DOCK2Q92608 1830 aa19.69■□□□□ 0.74
CDK5RAP3-228ENST00000583363 A0A0D9SFI3 127 aa19.69■□□□□ 0.74
CDK5RAP3-228ENST00000583363 TMEM88BA6NKF7 163 aa19.69■□□□□ 0.74
CDK5RAP3-228ENST00000583363 SGSM2O43147 1006 aa19.69■□□□□ 0.74
CDK5RAP3-228ENST00000583363 EPHX2P34913 555 aa19.69■□□□□ 0.74
CDK5RAP3-228ENST00000583363 DZIP1Q86YF9 867 aaKnown RBP19.69■□□□□ 0.74
CDK5RAP3-228ENST00000583363 FAM163AQ96GL9 167 aaPredicted RBP19.69■□□□□ 0.74
CDK5RAP3-228ENST00000583363 SEC62Q99442 399 aaKnown RBP19.69■□□□□ 0.74
CDK5RAP3-228ENST00000583363 GMLQ99445 158 aa19.69■□□□□ 0.74
CDK5RAP3-228ENST00000583363 MRIQ9BWK5 157 aa19.69■□□□□ 0.74
CDK5RAP3-228ENST00000583363 SEC24BO95487 1268 aa19.68■□□□□ 0.74
CDK5RAP3-228ENST00000583363 LDHCP07864 332 aa19.68■□□□□ 0.74
CDK5RAP3-228ENST00000583363 VEGFBP49765 207 aa19.68■□□□□ 0.74
CDK5RAP3-228ENST00000583363 GSTO1P78417 241 aa19.68■□□□□ 0.74
CDK5RAP3-228ENST00000583363 PUS7LQ9H0K6 701 aaKnown RBP19.68■□□□□ 0.74
CDK5RAP3-228ENST00000583363 IL25Q9H293 177 aa19.68■□□□□ 0.74
CDK5RAP3-228ENST00000583363 TTF2Q9UNY4 1162 aaKnown RBP19.68■□□□□ 0.74
CDK5RAP3-228ENST00000583363 CLEC11AQ9Y240 323 aa19.68■□□□□ 0.74
CDK5RAP3-228ENST00000583363 MYO3BQ8WXR4 1341 aa19.68■□□□□ 0.74
CDK5RAP3-228ENST00000583363 F8W031 263 aaPredicted RBP19.67■□□□□ 0.74
CDK5RAP3-228ENST00000583363 ADGRA1Q86SQ6 560 aa19.67■□□□□ 0.74
CDK5RAP3-228ENST00000583363 AGBL3Q8NEM8 1001 aa19.67■□□□□ 0.74
CDK5RAP3-228ENST00000583363 M0R2C6 588 aa19.66■□□□□ 0.74
CDK5RAP3-228ENST00000583363 EIF5BO60841 1220 aaKnown RBP19.66■□□□□ 0.74
CDK5RAP3-228ENST00000583363 HDLBPQ00341 1268 aaKnown RBP19.66■□□□□ 0.74
CDK5RAP3-228ENST00000583363 KIAA0825Q8IV33 1275 aa19.66■□□□□ 0.74
CDK5RAP3-228ENST00000583363 SLF2Q8IX21 1173 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms