RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 PUS3Q9BZE2 481 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-227ENST00000583352 TDRD3Q9H7E2 651 aaKnown RBP12.19□□□□□ -0.46
CDK5RAP3-227ENST00000583352 ELP3Q9H9T3 547 aa12.19□□□□□ -0.46
CDK5RAP3-227ENST00000583352 RCAN3Q9UKA8 241 aa12.19□□□□□ -0.46
CDK5RAP3-227ENST00000583352 ARAP2Q8WZ64 1704 aa12.19□□□□□ -0.46
CDK5RAP3-227ENST00000583352 NBPF7P0C2Y1 421 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-227ENST00000583352 GJA5P36382 358 aa12.18□□□□□ -0.46
CDK5RAP3-227ENST00000583352 CRKP46108 304 aa12.18□□□□□ -0.46
CDK5RAP3-227ENST00000583352 CRHR2Q13324 411 aa12.18□□□□□ -0.46
CDK5RAP3-227ENST00000583352 DZIP1LQ8IYY4 767 aaKnown RBP12.18□□□□□ -0.46
CDK5RAP3-227ENST00000583352 OPTNQ96CV9 577 aa12.18□□□□□ -0.46
CDK5RAP3-227ENST00000583352 KAZALD1Q96I82 304 aa12.18□□□□□ -0.46
CDK5RAP3-227ENST00000583352 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
CDK5RAP3-227ENST00000583352 RIPOR2Q9Y4F9 1068 aa12.18□□□□□ -0.46
CDK5RAP3-227ENST00000583352 PDE4DIPQ5VU43 2346 aa12.18□□□□□ -0.46
CDK5RAP3-227ENST00000583352 UTYO14607 1347 aa12.17□□□□□ -0.46
CDK5RAP3-227ENST00000583352 TESPA1A2RU30 521 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-227ENST00000583352 TCP10L2B9ZVM9 353 aa12.17□□□□□ -0.46
CDK5RAP3-227ENST00000583352 E9PSI1 815 aa12.17□□□□□ -0.46
CDK5RAP3-227ENST00000583352 FRAT2O75474 233 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-227ENST00000583352 CHAF1AQ13111 956 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-227ENST00000583352 CAVIN4Q5BKX8 364 aa12.17□□□□□ -0.46
CDK5RAP3-227ENST00000583352 METTL24Q5JXM2 366 aa12.17□□□□□ -0.46
CDK5RAP3-227ENST00000583352 INTS3Q68E01 1043 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-227ENST00000583352 CD99L2Q8TCZ2 262 aa12.17□□□□□ -0.46
CDK5RAP3-227ENST00000583352 TBC1D22AQ8WUA7 517 aa12.17□□□□□ -0.46
CDK5RAP3-227ENST00000583352 OTOFQ9HC10 1997 aa12.17□□□□□ -0.46
CDK5RAP3-227ENST00000583352 IRX6P78412 446 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 MAP3K9P80192 1104 aa12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 HDLBPQ00341 1268 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 SP3Q02447 781 aa12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 RABL6Q3YEC7 729 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 FBXO33Q7Z6M2 555 aa12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 TEPSINQ96N21 525 aa12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 PTPN18Q99952 460 aa12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 TMEM39BQ9GZU3 492 aa12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 BICC1Q9H694 974 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 EFCC1Q9HA90 598 aa12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 IQSEC3Q9UPP2 1182 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 PTPN22Q9Y2R2 807 aa12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 CSADQ9Y600 493 aa12.16□□□□□ -0.46
CDK5RAP3-227ENST00000583352 GTF2A2P52657 109 aa12.15□□□□□ -0.46
CDK5RAP3-227ENST00000583352 LRRC24Q50LG9 513 aa12.15□□□□□ -0.46
CDK5RAP3-227ENST00000583352 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-227ENST00000583352 CDAN1Q8IWY9 1227 aa12.15□□□□□ -0.46
CDK5RAP3-227ENST00000583352 ANKRD44Q8N8A2 993 aa12.15□□□□□ -0.46
CDK5RAP3-227ENST00000583352 TEKT1Q969V4 418 aa12.15□□□□□ -0.46
CDK5RAP3-227ENST00000583352 TMOD2Q9NZR1 351 aa12.15□□□□□ -0.46
CDK5RAP3-227ENST00000583352 CCL15-CCL14A0A0B4J2E2 113 aa12.14□□□□□ -0.47
CDK5RAP3-227ENST00000583352 PDE8BO95263 885 aa12.14□□□□□ -0.47
CDK5RAP3-227ENST00000583352 VGLL4Q14135 290 aa12.14□□□□□ -0.47
CDK5RAP3-227ENST00000583352 ARHGEF6Q15052 776 aa12.14□□□□□ -0.47
CDK5RAP3-227ENST00000583352 TAF1CQ15572 869 aaPredicted RBP12.14□□□□□ -0.47
CDK5RAP3-227ENST00000583352 GRIK5Q16478 980 aa12.14□□□□□ -0.47
CDK5RAP3-227ENST00000583352 CCL15Q16663 113 aa12.14□□□□□ -0.47
CDK5RAP3-227ENST00000583352 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
CDK5RAP3-227ENST00000583352 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.14□□□□□ -0.47
CDK5RAP3-227ENST00000583352 BRI3BPQ8WY22 251 aa12.14□□□□□ -0.47
CDK5RAP3-227ENST00000583352 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
CDK5RAP3-227ENST00000583352 ZFYVE28Q9HCC9 887 aa12.14□□□□□ -0.47
CDK5RAP3-227ENST00000583352 MAST3O60307 1309 aa12.13□□□□□ -0.47
CDK5RAP3-227ENST00000583352 PTPRCP08575 1304 aa12.13□□□□□ -0.47
CDK5RAP3-227ENST00000583352 WDHD1O75717 1129 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-227ENST00000583352 IFIT1P09914 478 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-227ENST00000583352 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-227ENST00000583352 VGLL2Q8N8G2 317 aa12.13□□□□□ -0.47
CDK5RAP3-227ENST00000583352 CNKSR2Q8WXI2 1034 aa12.13□□□□□ -0.47
CDK5RAP3-227ENST00000583352 ARMC5Q96C12 935 aa12.13□□□□□ -0.47
CDK5RAP3-227ENST00000583352 HOOK2Q96ED9 719 aa12.13□□□□□ -0.47
CDK5RAP3-227ENST00000583352 OTUD5Q96G74 571 aa12.13□□□□□ -0.47
CDK5RAP3-227ENST00000583352 MRIQ9BWK5 157 aa12.13□□□□□ -0.47
CDK5RAP3-227ENST00000583352 PPP4R2Q9NY27 417 aa12.13□□□□□ -0.47
CDK5RAP3-227ENST00000583352 KIF16BQ96L93 1317 aa12.12□□□□□ -0.47
CDK5RAP3-227ENST00000583352 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
CDK5RAP3-227ENST00000583352 SPDYE5A6NIY4 337 aa12.12□□□□□ -0.47
CDK5RAP3-227ENST00000583352 BCAMP50895 628 aa12.12□□□□□ -0.47
CDK5RAP3-227ENST00000583352 CACNB3P54284 484 aa12.12□□□□□ -0.47
CDK5RAP3-227ENST00000583352 PUM3Q15397 648 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-227ENST00000583352 FAM83AQ86UY5 434 aa12.12□□□□□ -0.47
CDK5RAP3-227ENST00000583352 KLHDC4Q8TBB5 520 aa12.12□□□□□ -0.47
CDK5RAP3-227ENST00000583352 GCC1Q96CN9 775 aa12.12□□□□□ -0.47
CDK5RAP3-227ENST00000583352 ZDHHC15Q96MV8 337 aa12.12□□□□□ -0.47
CDK5RAP3-227ENST00000583352 SUGT1Q9Y2Z0 365 aa12.12□□□□□ -0.47
CDK5RAP3-227ENST00000583352 RBBP6Q7Z6E9 1792 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-227ENST00000583352 CETPP11597 493 aa12.11□□□□□ -0.47
CDK5RAP3-227ENST00000583352 FKBP1CQ5VVH2 108 aa12.11□□□□□ -0.47
CDK5RAP3-227ENST00000583352 DCAF15Q66K64 600 aa12.11□□□□□ -0.47
CDK5RAP3-227ENST00000583352 HHIPL2Q6UWX4 724 aa12.11□□□□□ -0.47
CDK5RAP3-227ENST00000583352 ERO1BQ86YB8 467 aa12.11□□□□□ -0.47
CDK5RAP3-227ENST00000583352 FAM43AQ8N2R8 423 aa12.11□□□□□ -0.47
CDK5RAP3-227ENST00000583352 WRNIP1Q96S55 665 aa12.11□□□□□ -0.47
CDK5RAP3-227ENST00000583352 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
CDK5RAP3-227ENST00000583352 SNCAIPQ9Y6H5 919 aa12.11□□□□□ -0.47
CDK5RAP3-227ENST00000583352 RPAP1Q9BWH6 1393 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-227ENST00000583352 EYA2O00167 538 aa12.1□□□□□ -0.47
CDK5RAP3-227ENST00000583352 SLC5A1P13866 664 aa12.1□□□□□ -0.47
CDK5RAP3-227ENST00000583352 FGFR2P21802 821 aa12.1□□□□□ -0.47
CDK5RAP3-227ENST00000583352 CAP1Q01518 475 aa12.1□□□□□ -0.47
CDK5RAP3-227ENST00000583352 APOBEC3HQ6NTF7 200 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-227ENST00000583352 SSH1Q8WYL5 1049 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms