RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 SP3Q02447 781 aa20.47■□□□□ 0.87
SREBF1-221ENST00000583080 UBE4AQ14139 1066 aa20.47■□□□□ 0.87
SREBF1-221ENST00000583080 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.47■□□□□ 0.87
SREBF1-221ENST00000583080 DZIP1LQ8IYY4 767 aaKnown RBP20.47■□□□□ 0.87
SREBF1-221ENST00000583080 BRI3BPQ8WY22 251 aa20.47■□□□□ 0.87
SREBF1-221ENST00000583080 ARMC5Q96C12 935 aa20.47■□□□□ 0.87
SREBF1-221ENST00000583080 SUCLG2Q96I99 432 aa20.47■□□□□ 0.87
SREBF1-221ENST00000583080 FAM84BQ96KN1 310 aaPredicted RBP20.47■□□□□ 0.87
SREBF1-221ENST00000583080 TMEM39BQ9GZU3 492 aa20.47■□□□□ 0.87
SREBF1-221ENST00000583080 MRS2Q9HD23 443 aa20.47■□□□□ 0.87
SREBF1-221ENST00000583080 HIBADHP31937 336 aaKnown RBP20.46■□□□□ 0.87
SREBF1-221ENST00000583080 VGLL4Q14135 290 aa20.46■□□□□ 0.87
SREBF1-221ENST00000583080 KAZALD1Q96I82 304 aa20.46■□□□□ 0.87
SREBF1-221ENST00000583080 C9orf78Q9NZ63 289 aaPredicted RBP20.46■□□□□ 0.87
SREBF1-221ENST00000583080 IQSEC3Q9UPP2 1182 aaPredicted RBP20.46■□□□□ 0.87
SREBF1-221ENST00000583080 CRKP46108 304 aa20.45■□□□□ 0.86
SREBF1-221ENST00000583080 SLC4A10Q6U841 1118 aa20.45■□□□□ 0.86
SREBF1-221ENST00000583080 ZSWIM8A7E2V4 1837 aa20.44■□□□□ 0.86
SREBF1-221ENST00000583080 ALDH1L1O75891 902 aa20.44■□□□□ 0.86
SREBF1-221ENST00000583080 EN2P19622 333 aaPredicted RBP20.44■□□□□ 0.86
SREBF1-221ENST00000583080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.44■□□□□ 0.86
SREBF1-221ENST00000583080 CCL15-CCL14A0A0B4J2E2 113 aa20.43■□□□□ 0.86
SREBF1-221ENST00000583080 CACNB3P54284 484 aa20.43■□□□□ 0.86
SREBF1-221ENST00000583080 CCL15Q16663 113 aa20.43■□□□□ 0.86
SREBF1-221ENST00000583080 FAM43AQ8N2R8 423 aa20.43■□□□□ 0.86
SREBF1-221ENST00000583080 GCC1Q96CN9 775 aa20.43■□□□□ 0.86
SREBF1-221ENST00000583080 OTUD5Q96G74 571 aa20.43■□□□□ 0.86
SREBF1-221ENST00000583080 SRCIN1Q9C0H9 1055 aa20.43■□□□□ 0.86
SREBF1-221ENST00000583080 NBPF7P0C2Y1 421 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-221ENST00000583080 MAP3K9P80192 1104 aa20.42■□□□□ 0.86
SREBF1-221ENST00000583080 CHAF1AQ13111 956 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-221ENST00000583080 TAF1CQ15572 869 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-221ENST00000583080 HABP4Q5JVS0 413 aaKnown RBP20.42■□□□□ 0.86
SREBF1-221ENST00000583080 RIPOR2Q9Y4F9 1068 aa20.42■□□□□ 0.86
SREBF1-221ENST00000583080 PTCH2Q9Y6C5 1203 aa20.42■□□□□ 0.86
SREBF1-221ENST00000583080 FBXO33Q7Z6M2 555 aa20.41■□□□□ 0.86
SREBF1-221ENST00000583080 ZNF333Q96JL9 665 aa20.41■□□□□ 0.86
SREBF1-221ENST00000583080 TNNI2P48788 182 aa20.4■□□□□ 0.86
SREBF1-221ENST00000583080 GTF2A2P52657 109 aa20.4■□□□□ 0.86
SREBF1-221ENST00000583080 LRRC24Q50LG9 513 aa20.4■□□□□ 0.86
SREBF1-221ENST00000583080 MROH5Q6ZUA9 1318 aa20.4■□□□□ 0.86
SREBF1-221ENST00000583080 BICC1Q9H694 974 aaKnown RBP20.4■□□□□ 0.86
SREBF1-221ENST00000583080 CSADQ9Y600 493 aa20.4■□□□□ 0.86
SREBF1-221ENST00000583080 SNCAIPQ9Y6H5 919 aa20.4■□□□□ 0.86
SREBF1-221ENST00000583080 ANKRD44Q8N8A2 993 aa20.39■□□□□ 0.85
SREBF1-221ENST00000583080 ZFYVE28Q9HCC9 887 aa20.39■□□□□ 0.85
SREBF1-221ENST00000583080 UTYO14607 1347 aa20.38■□□□□ 0.85
SREBF1-221ENST00000583080 SPDYE5A6NIY4 337 aa20.38■□□□□ 0.85
SREBF1-221ENST00000583080 RABL6Q3YEC7 729 aaPredicted RBP20.38■□□□□ 0.85
SREBF1-221ENST00000583080 VPS37DQ86XT2 251 aa20.38■□□□□ 0.85
SREBF1-221ENST00000583080 VGLL2Q8N8G2 317 aa20.38■□□□□ 0.85
SREBF1-221ENST00000583080 ARHGAP39Q9C0H5 1083 aa20.38■□□□□ 0.85
SREBF1-221ENST00000583080 SLC9C1Q4G0N8 1177 aa20.37■□□□□ 0.85
SREBF1-221ENST00000583080 METTL24Q5JXM2 366 aa20.37■□□□□ 0.85
SREBF1-221ENST00000583080 KLHDC4Q8TBB5 520 aa20.37■□□□□ 0.85
SREBF1-221ENST00000583080 TEKT1Q969V4 418 aa20.37■□□□□ 0.85
SREBF1-221ENST00000583080 WRNIP1Q96S55 665 aa20.37■□□□□ 0.85
SREBF1-221ENST00000583080 MYCP01106 439 aaPredicted RBP20.36■□□□□ 0.85
SREBF1-221ENST00000583080 HDLBPQ00341 1268 aaKnown RBP20.36■□□□□ 0.85
SREBF1-221ENST00000583080 TBC1D22AQ8WUA7 517 aa20.36■□□□□ 0.85
SREBF1-221ENST00000583080 ZKSCAN4Q969J2 545 aaPredicted RBP20.36■□□□□ 0.85
SREBF1-221ENST00000583080 TMEM106CQ9BVX2 250 aa20.36■□□□□ 0.85
SREBF1-221ENST00000583080 BTBD19C9JJ37 291 aa20.35■□□□□ 0.85
SREBF1-221ENST00000583080 FRAT2O75474 233 aaPredicted RBP20.35■□□□□ 0.85
SREBF1-221ENST00000583080 BCAMP50895 628 aa20.35■□□□□ 0.85
SREBF1-221ENST00000583080 APOBEC3HQ6NTF7 200 aaKnown RBP20.35■□□□□ 0.85
SREBF1-221ENST00000583080 ZDHHC15Q96MV8 337 aa20.35■□□□□ 0.85
SREBF1-221ENST00000583080 IRF6O14896 467 aa20.34■□□□□ 0.85
SREBF1-221ENST00000583080 PDE8BO95263 885 aa20.34■□□□□ 0.85
SREBF1-221ENST00000583080 CAVIN4Q5BKX8 364 aa20.34■□□□□ 0.85
SREBF1-221ENST00000583080 ERO1BQ86YB8 467 aa20.34■□□□□ 0.85
SREBF1-221ENST00000583080 SH3TC2Q8TF17 1288 aa20.34■□□□□ 0.85
SREBF1-221ENST00000583080 TMOD2Q9NZR1 351 aa20.34■□□□□ 0.85
SREBF1-221ENST00000583080 RPAP1Q9BWH6 1393 aaPredicted RBP20.34■□□□□ 0.85
SREBF1-221ENST00000583080 TLR2O60603 784 aa20.33■□□□□ 0.85
SREBF1-221ENST00000583080 CETPP11597 493 aa20.33■□□□□ 0.85
SREBF1-221ENST00000583080 MYH13Q9UKX3 1938 aa20.32■□□□□ 0.84
SREBF1-221ENST00000583080 ECM2O94769 699 aaPredicted RBP20.32■□□□□ 0.84
SREBF1-221ENST00000583080 LACTBP83111 547 aaPredicted RBP20.32■□□□□ 0.84
SREBF1-221ENST00000583080 PPIL2Q13356 520 aa20.32■□□□□ 0.84
SREBF1-221ENST00000583080 ARHGEF6Q15052 776 aa20.32■□□□□ 0.84
SREBF1-221ENST00000583080 SLC4A8Q2Y0W8 1093 aa20.32■□□□□ 0.84
SREBF1-221ENST00000583080 NBPF11Q86T75 865 aa20.32■□□□□ 0.84
SREBF1-221ENST00000583080 FAM83AQ86UY5 434 aa20.32■□□□□ 0.84
SREBF1-221ENST00000583080 FXR1P51114 621 aaKnown RBP eCLIP20.31■□□□□ 0.84
SREBF1-221ENST00000583080 SNAPC2Q13487 334 aa20.31■□□□□ 0.84
SREBF1-221ENST00000583080 MIGA2Q7L4E1 593 aa20.31■□□□□ 0.84
SREBF1-221ENST00000583080 MRPL50Q8N5N7 158 aaKnown RBP20.31■□□□□ 0.84
SREBF1-221ENST00000583080 MAST3O60307 1309 aa20.3■□□□□ 0.84
SREBF1-221ENST00000583080 ANP32CO43423 234 aa20.3■□□□□ 0.84
SREBF1-221ENST00000583080 FGFR2P21802 821 aa20.3■□□□□ 0.84
SREBF1-221ENST00000583080 CTGFP29279 349 aa20.3■□□□□ 0.84
SREBF1-221ENST00000583080 INPP5BP32019 993 aa20.3■□□□□ 0.84
SREBF1-221ENST00000583080 PUM3Q15397 648 aaKnown RBP20.3■□□□□ 0.84
SREBF1-221ENST00000583080 FKBP1CQ5VVH2 108 aa20.3■□□□□ 0.84
SREBF1-221ENST00000583080 ZCCHC17Q9NP64 241 aaKnown RBP20.3■□□□□ 0.84
SREBF1-221ENST00000583080 HHIPL2Q6UWX4 724 aa20.29■□□□□ 0.84
SREBF1-221ENST00000583080 FAM9BQ8IZU0 186 aa20.29■□□□□ 0.84
SREBF1-221ENST00000583080 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.29■□□□□ 0.84
SREBF1-221ENST00000583080 MRIQ9BWK5 157 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms