RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 POLR3EQ9NVU0 708 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 MED23Q9ULK4 1368 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 PATL2C9JE40 543 aaKnown RBP6.71□□□□□ -1.34
RTTN-209ENST00000583043 MAP9Q49MG5 647 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 FKBP15Q5T1M5 1219 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 ZNF804AQ7Z570 1209 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 NECAB1Q8N987 351 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 NAA15Q9BXJ9 866 aaKnown RBP6.71□□□□□ -1.34
RTTN-209ENST00000583043 MAGEF1Q9HAY2 307 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 MAGEB6P1A0A0J9YX57 407 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 KIF5CO60282 957 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 TNNT1P13805 278 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 ITGA6P23229 1130 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 TRAPPC10P48553 1259 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 CCDC51Q96ER9 411 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 PDLIM2Q96JY6 352 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 PCMTD1Q96MG8 357 aaPredicted RBP6.71□□□□□ -1.34
RTTN-209ENST00000583043 TSG101Q99816 390 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 KAT14Q9H8E8 782 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 RCOR1Q9UKL0 485 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 MAST3O60307 1309 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 SALL3Q9BXA9 1300 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 E7EWF7 191 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 CMA1P23946 247 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 CTSWP56202 376 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 MYL5Q02045 173 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 CEBPZQ03701 1054 aaKnown RBP6.7□□□□□ -1.34
RTTN-209ENST00000583043 PTPN12Q05209 780 aaKnown RBP6.7□□□□□ -1.34
RTTN-209ENST00000583043 UBE4AQ14139 1066 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 ME3Q16798 604 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 GIMAP6Q6P9H5 292 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 NUTM2AQ8IVF1 878 aaPredicted RBP6.7□□□□□ -1.34
RTTN-209ENST00000583043 CEP89Q96ST8 783 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 SLC4A4Q9Y6R1 1079 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 UBR1Q8IWV7 1749 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 SIGLEC1Q9BZZ2 1709 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 PPP6R2O75170 966 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 PDILTQ8N807 584 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 SPC24Q8NBT2 197 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 ZMYM6O95789 1325 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 hCG_1984214I3L0E3 225 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 LIFRP42702 1097 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 USP5P45974 858 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 CLEC4GQ6UXB4 293 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 ZNF713Q8N859 430 aaPredicted RBP6.7□□□□□ -1.34
RTTN-209ENST00000583043 TMEM63CQ9P1W3 806 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 STK36Q9NRP7 1315 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 GPAA1O43292 621 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 WDR66Q8TBY9 1149 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 FAM227BQ96M60 508 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 MKNK2Q9HBH9 465 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 BICDL2A1A5D9 508 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 MYL1P05976 194 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 CYP7A1P22680 504 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 GNA11P29992 359 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 KRT2P35908 639 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 NLRP12P59046 1061 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 CAMK4Q16566 473 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 NOM1Q5C9Z4 860 aaKnown RBP6.7□□□□□ -1.34
RTTN-209ENST00000583043 IQUBQ8NA54 791 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 TFIP11Q9UBB9 837 aaKnown RBP6.7□□□□□ -1.34
RTTN-209ENST00000583043 PALD1Q9ULE6 856 aa6.7□□□□□ -1.34
RTTN-209ENST00000583043 IKBKBO14920 756 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 DDAH1O94760 285 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 NLRP5P59047 1200 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 CCT2P78371 535 aaKnown RBP6.69□□□□□ -1.34
RTTN-209ENST00000583043 CALML4Q96GE6 196 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 DBNLQ9UJU6 430 aaKnown RBP6.69□□□□□ -1.34
RTTN-209ENST00000583043 TAOK2Q9UL54 1235 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 PES1O00541 588 aaKnown RBP6.69□□□□□ -1.34
RTTN-209ENST00000583043 HSPD1P10809 573 aaKnown RBP6.69□□□□□ -1.34
RTTN-209ENST00000583043 PLCD1P51178 756 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 ZNF75DP51815 510 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 ARHGAP29Q52LW3 1261 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 IFIT1BQ5T764 474 aaKnown RBP6.69□□□□□ -1.34
RTTN-209ENST00000583043 CKAP2LQ8IYA6 745 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 SETDB2Q96T68 719 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 SLC26A6Q9BXS9 759 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 ARPP21Q9UBL0 812 aaPredicted RBP6.69□□□□□ -1.34
RTTN-209ENST00000583043 ABCF2Q9UG63 623 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 ATP6V1AP38606 617 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 ST5P78524 1137 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 SNW1Q13573 536 aaKnown RBP6.69□□□□□ -1.34
RTTN-209ENST00000583043 SARM1Q6SZW1 724 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 TBC1D22AQ8WUA7 517 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 PANK2Q9BZ23 570 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 A0A0D9SFI3 127 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 BMS1Q14692 1282 aaKnown RBP6.69□□□□□ -1.34
RTTN-209ENST00000583043 AKNAD1Q5T1N1 836 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 MYSM1Q5VVJ2 828 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 TMCO3Q6UWJ1 677 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 ELOA2Q8IYF1 753 aaPredicted RBP6.69□□□□□ -1.34
RTTN-209ENST00000583043 ISCA1Q9BUE6 129 aa6.69□□□□□ -1.34
RTTN-209ENST00000583043 PPP1R12BO60237 982 aaPredicted RBP6.68□□□□□ -1.34
RTTN-209ENST00000583043 USO1O60763 962 aaKnown RBP6.68□□□□□ -1.34
RTTN-209ENST00000583043 SASH1O94885 1247 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 APOBRQ0VD83 1088 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 CEP135Q66GS9 1140 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 STXBP4Q6ZWJ1 553 aa6.68□□□□□ -1.34
RTTN-209ENST00000583043 CNGA4Q8IV77 575 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms