RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 HHIPL2Q6UWX4 724 aa17.24■□□□□ 0.35
GGA3-215ENST00000582821 NEUROD6Q96NK8 337 aa17.24■□□□□ 0.35
GGA3-215ENST00000582821 COL1A1P02452 1464 aaPredicted RBP17.24■□□□□ 0.35
GGA3-215ENST00000582821 HUNKP57058 714 aa17.23■□□□□ 0.35
GGA3-215ENST00000582821 SPDYE2Q495Y8 402 aa17.23■□□□□ 0.35
GGA3-215ENST00000582821 C20orf194Q5TEA3 1177 aa17.23■□□□□ 0.35
GGA3-215ENST00000582821 TEKT1Q969V4 418 aa17.23■□□□□ 0.35
GGA3-215ENST00000582821 DEFB129Q9H1M3 183 aa17.23■□□□□ 0.35
GGA3-215ENST00000582821 ZNF70Q9UC06 446 aaPredicted RBP17.23■□□□□ 0.35
GGA3-215ENST00000582821 SCAF8Q9UPN6 1271 aaKnown RBP17.23■□□□□ 0.35
GGA3-215ENST00000582821 PPP2R3BQ9Y5P8 575 aa17.23■□□□□ 0.35
GGA3-215ENST00000582821 AOX1Q06278 1338 aa17.22■□□□□ 0.35
GGA3-215ENST00000582821 MAP2K2P36507 400 aa17.22■□□□□ 0.35
GGA3-215ENST00000582821 OS9Q13438 667 aaPredicted RBP17.22■□□□□ 0.35
GGA3-215ENST00000582821 TNNI3KQ59H18 835 aa17.22■□□□□ 0.35
GGA3-215ENST00000582821 CYP4F22Q6NT55 531 aa17.22■□□□□ 0.35
GGA3-215ENST00000582821 ZGPATQ8N5A5 531 aaKnown RBP17.22■□□□□ 0.35
GGA3-215ENST00000582821 ZDHHC15Q96MV8 337 aa17.22■□□□□ 0.35
GGA3-215ENST00000582821 FPGT-TNNI3KV9GXZ4 949 aa17.22■□□□□ 0.35
GGA3-215ENST00000582821 TNFAIP1Q13829 316 aa17.21■□□□□ 0.35
GGA3-215ENST00000582821 RASGRF1Q13972 1273 aa17.21■□□□□ 0.35
GGA3-215ENST00000582821 HSP90AB4PQ58FF6 505 aa17.21■□□□□ 0.35
GGA3-215ENST00000582821 PRAMEF18Q5VWM3 479 aa17.21■□□□□ 0.35
GGA3-215ENST00000582821 RGMBQ6NW40 437 aa17.21■□□□□ 0.35
GGA3-215ENST00000582821 TDRD3Q9H7E2 651 aaKnown RBP17.21■□□□□ 0.35
GGA3-215ENST00000582821 PAPPA2Q9BXP8 1791 aa17.2■□□□□ 0.34
GGA3-215ENST00000582821 CLRN2A0PK11 232 aa17.2■□□□□ 0.34
GGA3-215ENST00000582821 HMMRO75330 724 aa17.2■□□□□ 0.34
GGA3-215ENST00000582821 LDHBP07195 334 aaKnown RBP17.2■□□□□ 0.34
GGA3-215ENST00000582821 ARID4AP29374 1257 aaPredicted RBP17.2■□□□□ 0.34
GGA3-215ENST00000582821 NF2P35240 595 aa17.2■□□□□ 0.34
GGA3-215ENST00000582821 GORABQ5T7V8 394 aa17.2■□□□□ 0.34
GGA3-215ENST00000582821 APOBEC3HQ6NTF7 200 aaKnown RBP17.2■□□□□ 0.34
GGA3-215ENST00000582821 PAXIP1Q6ZW49 1069 aaPredicted RBP17.2■□□□□ 0.34
GGA3-215ENST00000582821 ERC1Q8IUD2 1116 aa17.2■□□□□ 0.34
GGA3-215ENST00000582821 SIRT2Q8IXJ6 389 aa17.2■□□□□ 0.34
GGA3-215ENST00000582821 CCDC102AQ96A19 550 aa17.2■□□□□ 0.34
GGA3-215ENST00000582821 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
GGA3-215ENST00000582821 WBP1LQ9NX94 342 aa17.2■□□□□ 0.34
GGA3-215ENST00000582821 UQCRFS1P1P0C7P4 283 aa17.19■□□□□ 0.34
GGA3-215ENST00000582821 HSPA1AP0DMV8 641 aaKnown RBP17.19■□□□□ 0.34
GGA3-215ENST00000582821 HSPA1BP0DMV9 641 aaKnown RBP17.19■□□□□ 0.34
GGA3-215ENST00000582821 PRDX5P30044 214 aa17.19■□□□□ 0.34
GGA3-215ENST00000582821 MAP2K1Q02750 393 aaPredicted RBP17.19■□□□□ 0.34
GGA3-215ENST00000582821 RASA3Q14644 834 aa17.19■□□□□ 0.34
GGA3-215ENST00000582821 FKBP1CQ5VVH2 108 aa17.19■□□□□ 0.34
GGA3-215ENST00000582821 ZNF512BQ96KM6 892 aaPredicted RBP17.19■□□□□ 0.34
GGA3-215ENST00000582821 VEZTQ9HBM0 779 aa17.19■□□□□ 0.34
GGA3-215ENST00000582821 THSD7BQ9C0I4 1608 aa17.18■□□□□ 0.34
GGA3-215ENST00000582821 NOGQ13253 232 aa17.18■□□□□ 0.34
GGA3-215ENST00000582821 SUPT20HL1Q3ZLR7 823 aa17.18■□□□□ 0.34
GGA3-215ENST00000582821 SPTY2D1Q68D10 685 aaPredicted RBP17.18■□□□□ 0.34
GGA3-215ENST00000582821 HMG20BQ9P0W2 317 aa17.18■□□□□ 0.34
GGA3-215ENST00000582821 EXOC6BQ9Y2D4 811 aa17.18■□□□□ 0.34
GGA3-215ENST00000582821 MYH2Q9UKX2 1941 aa17.17■□□□□ 0.34
GGA3-215ENST00000582821 FAM155AB1AL88 458 aaPredicted RBP17.17■□□□□ 0.34
GGA3-215ENST00000582821 ZNF157P51786 506 aaPredicted RBP17.17■□□□□ 0.34
GGA3-215ENST00000582821 MAP3K11Q16584 847 aa17.17■□□□□ 0.34
GGA3-215ENST00000582821 CCDC158Q5M9N0 1113 aa17.17■□□□□ 0.34
GGA3-215ENST00000582821 ARMC9Q7Z3E5 817 aa17.17■□□□□ 0.34
GGA3-215ENST00000582821 SPATA5Q8NB90 893 aa17.17■□□□□ 0.34
GGA3-215ENST00000582821 EAF2Q96CJ1 260 aaPredicted RBP17.17■□□□□ 0.34
GGA3-215ENST00000582821 FAM163AQ96GL9 167 aaPredicted RBP17.17■□□□□ 0.34
GGA3-215ENST00000582821 DBNDD2Q9BQY9 259 aa17.17■□□□□ 0.34
GGA3-215ENST00000582821 DAGLAQ9Y4D2 1042 aa17.17■□□□□ 0.34
GGA3-215ENST00000582821 AKAP11Q9UKA4 1901 aa17.17■□□□□ 0.34
GGA3-215ENST00000582821 UNCXA6NJT0 531 aa17.16■□□□□ 0.34
GGA3-215ENST00000582821 AOC2O75106 756 aa17.16■□□□□ 0.34
GGA3-215ENST00000582821 TNNI2P48788 182 aa17.16■□□□□ 0.34
GGA3-215ENST00000582821 LDLRAD1Q5T700 205 aa17.16■□□□□ 0.34
GGA3-215ENST00000582821 MOB2Q70IA6 237 aa17.16■□□□□ 0.34
GGA3-215ENST00000582821 FAM83AQ86UY5 434 aa17.16■□□□□ 0.34
GGA3-215ENST00000582821 DBNLQ9UJU6 430 aaKnown RBP17.16■□□□□ 0.34
GGA3-215ENST00000582821 UBE2Q2LH0YL09 131 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 PPP1R12BO60237 982 aaPredicted RBP17.15■□□□□ 0.34
GGA3-215ENST00000582821 IGSF3O75054 1194 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 RAB11FIP3O75154 756 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 SLC10A3P09131 477 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 MCAMP43121 646 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 RRP1P56182 461 aaKnown RBP17.15■□□□□ 0.34
GGA3-215ENST00000582821 GRM1Q13255 1194 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 DIXDC1Q155Q3 683 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 NBPF12Q5TAG4 269 aaPredicted RBP17.15■□□□□ 0.34
GGA3-215ENST00000582821 ERICH6Q7L0X2 663 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 SLF2Q8IX21 1173 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 RHPN1Q8TCX5 695 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 TEPSINQ96N21 525 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 TMOD2Q9NZR1 351 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 ABCF2Q9UG63 623 aa17.15■□□□□ 0.34
GGA3-215ENST00000582821 TCP10L2B9ZVM9 353 aa17.14■□□□□ 0.33
GGA3-215ENST00000582821 TTLL12Q14166 644 aaPredicted RBP17.14■□□□□ 0.33
GGA3-215ENST00000582821 TTC39AQ5SRH9 613 aa17.14■□□□□ 0.33
GGA3-215ENST00000582821 CDC42EP5Q6NZY7 148 aa17.14■□□□□ 0.33
GGA3-215ENST00000582821 KIF1BPQ96EK5 621 aa17.14■□□□□ 0.33
GGA3-215ENST00000582821 CCDC8Q9H0W5 538 aaPredicted RBP17.14■□□□□ 0.33
GGA3-215ENST00000582821 GAKO14976 1311 aa17.14■□□□□ 0.33
GGA3-215ENST00000582821 PI16Q6UXB8 463 aa17.13■□□□□ 0.33
GGA3-215ENST00000582821 DZIP1Q86YF9 867 aaKnown RBP17.13■□□□□ 0.33
GGA3-215ENST00000582821 AIDAQ96BJ3 306 aa17.13■□□□□ 0.33
GGA3-215ENST00000582821 ZIC5Q96T25 663 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms