RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 ARMC5Q96C12 935 aa17.16■□□□□ 0.34
SS18-222ENST00000582792 MS4A4AQ96JQ5 239 aa17.16■□□□□ 0.34
SS18-222ENST00000582792 FAM84BQ96KN1 310 aaPredicted RBP17.16■□□□□ 0.34
SS18-222ENST00000582792 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
SS18-222ENST00000582792 ALDH1L1O75891 902 aa17.15■□□□□ 0.34
SS18-222ENST00000582792 CRKP46108 304 aa17.15■□□□□ 0.34
SS18-222ENST00000582792 CAP1Q01518 475 aa17.15■□□□□ 0.34
SS18-222ENST00000582792 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.15■□□□□ 0.34
SS18-222ENST00000582792 CDAN1Q8IWY9 1227 aa17.15■□□□□ 0.34
SS18-222ENST00000582792 TCP10L2B9ZVM9 353 aa17.14■□□□□ 0.33
SS18-222ENST00000582792 TNNI2P48788 182 aa17.14■□□□□ 0.33
SS18-222ENST00000582792 BRI3BPQ8WY22 251 aa17.14■□□□□ 0.33
SS18-222ENST00000582792 SUCLG2Q96I99 432 aa17.14■□□□□ 0.33
SS18-222ENST00000582792 PUS3Q9BZE2 481 aaKnown RBP17.14■□□□□ 0.33
SS18-222ENST00000582792 SRCIN1Q9C0H9 1055 aa17.14■□□□□ 0.33
SS18-222ENST00000582792 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
SS18-222ENST00000582792 SPINK5Q9NQ38 1064 aaPredicted RBP17.14■□□□□ 0.33
SS18-222ENST00000582792 KIAA0100Q14667 2235 aaKnown RBP17.14■□□□□ 0.33
SS18-222ENST00000582792 GTF2A2P52657 109 aa17.13■□□□□ 0.33
SS18-222ENST00000582792 VGLL4Q14135 290 aa17.13■□□□□ 0.33
SS18-222ENST00000582792 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.13■□□□□ 0.33
SS18-222ENST00000582792 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
SS18-222ENST00000582792 KAZALD1Q96I82 304 aa17.13■□□□□ 0.33
SS18-222ENST00000582792 TMEM39BQ9GZU3 492 aa17.13■□□□□ 0.33
SS18-222ENST00000582792 RIPOR2Q9Y4F9 1068 aa17.13■□□□□ 0.33
SS18-222ENST00000582792 MROH5Q6ZUA9 1318 aa17.13■□□□□ 0.33
SS18-222ENST00000582792 CCL15-CCL14A0A0B4J2E2 113 aa17.12■□□□□ 0.33
SS18-222ENST00000582792 MAP3K9P80192 1104 aa17.12■□□□□ 0.33
SS18-222ENST00000582792 ARHGEF6Q15052 776 aa17.12■□□□□ 0.33
SS18-222ENST00000582792 TAF1CQ15572 869 aaPredicted RBP17.12■□□□□ 0.33
SS18-222ENST00000582792 CCL15Q16663 113 aa17.12■□□□□ 0.33
SS18-222ENST00000582792 SLC4A10Q6U841 1118 aa17.12■□□□□ 0.33
SS18-222ENST00000582792 ZFYVE28Q9HCC9 887 aa17.12■□□□□ 0.33
SS18-222ENST00000582792 CCER2I3L3R5 266 aa17.11■□□□□ 0.33
SS18-222ENST00000582792 EN2P19622 333 aaPredicted RBP17.11■□□□□ 0.33
SS18-222ENST00000582792 HDLBPQ00341 1268 aaKnown RBP17.11■□□□□ 0.33
SS18-222ENST00000582792 GRIK5Q16478 980 aa17.11■□□□□ 0.33
SS18-222ENST00000582792 HABP4Q5JVS0 413 aaKnown RBP17.11■□□□□ 0.33
SS18-222ENST00000582792 FBXO33Q7Z6M2 555 aa17.11■□□□□ 0.33
SS18-222ENST00000582792 ZNF333Q96JL9 665 aa17.11■□□□□ 0.33
SS18-222ENST00000582792 CSADQ9Y600 493 aa17.11■□□□□ 0.33
SS18-222ENST00000582792 SPDYE5A6NIY4 337 aa17.1■□□□□ 0.33
SS18-222ENST00000582792 NBPF7P0C2Y1 421 aaPredicted RBP17.1■□□□□ 0.33
SS18-222ENST00000582792 VPS37DQ86XT2 251 aa17.1■□□□□ 0.33
SS18-222ENST00000582792 FAM43AQ8N2R8 423 aa17.1■□□□□ 0.33
SS18-222ENST00000582792 TBC1D22AQ8WUA7 517 aa17.1■□□□□ 0.33
SS18-222ENST00000582792 OTUD5Q96G74 571 aa17.1■□□□□ 0.33
SS18-222ENST00000582792 UTYO14607 1347 aa17.1■□□□□ 0.33
SS18-222ENST00000582792 CHAF1AQ13111 956 aaPredicted RBP17.09■□□□□ 0.33
SS18-222ENST00000582792 CAVIN4Q5BKX8 364 aa17.09■□□□□ 0.33
SS18-222ENST00000582792 TEKT1Q969V4 418 aa17.09■□□□□ 0.33
SS18-222ENST00000582792 TMEM106CQ9BVX2 250 aa17.09■□□□□ 0.33
SS18-222ENST00000582792 IQSEC3Q9UPP2 1182 aaPredicted RBP17.09■□□□□ 0.33
SS18-222ENST00000582792 PTCH2Q9Y6C5 1203 aa17.09■□□□□ 0.33
SS18-222ENST00000582792 FRAT2O75474 233 aaPredicted RBP17.08■□□□□ 0.32
SS18-222ENST00000582792 CACNB3P54284 484 aa17.08■□□□□ 0.32
SS18-222ENST00000582792 RABL6Q3YEC7 729 aaPredicted RBP17.08■□□□□ 0.32
SS18-222ENST00000582792 SLC9C1Q4G0N8 1177 aa17.08■□□□□ 0.32
SS18-222ENST00000582792 NBPF11Q86T75 865 aa17.08■□□□□ 0.32
SS18-222ENST00000582792 BICC1Q9H694 974 aaKnown RBP17.08■□□□□ 0.32
SS18-222ENST00000582792 SNCAIPQ9Y6H5 919 aa17.08■□□□□ 0.32
SS18-222ENST00000582792 WDHD1O75717 1129 aaPredicted RBP17.07■□□□□ 0.32
SS18-222ENST00000582792 CETPP11597 493 aa17.07■□□□□ 0.32
SS18-222ENST00000582792 LRRC24Q50LG9 513 aa17.07■□□□□ 0.32
SS18-222ENST00000582792 METTL24Q5JXM2 366 aa17.07■□□□□ 0.32
SS18-222ENST00000582792 FAM83AQ86UY5 434 aa17.07■□□□□ 0.32
SS18-222ENST00000582792 ERO1BQ86YB8 467 aa17.07■□□□□ 0.32
SS18-222ENST00000582792 VGLL2Q8N8G2 317 aa17.07■□□□□ 0.32
SS18-222ENST00000582792 ZDHHC15Q96MV8 337 aa17.07■□□□□ 0.32
SS18-222ENST00000582792 MRIQ9BWK5 157 aa17.07■□□□□ 0.32
SS18-222ENST00000582792 ZCCHC17Q9NP64 241 aaKnown RBP17.07■□□□□ 0.32
SS18-222ENST00000582792 TLR2O60603 784 aa17.06■□□□□ 0.32
SS18-222ENST00000582792 PDE8BO95263 885 aa17.06■□□□□ 0.32
SS18-222ENST00000582792 FKBP1CQ5VVH2 108 aa17.06■□□□□ 0.32
SS18-222ENST00000582792 ANKRD44Q8N8A2 993 aa17.06■□□□□ 0.32
SS18-222ENST00000582792 HOOK2Q96ED9 719 aa17.06■□□□□ 0.32
SS18-222ENST00000582792 WRNIP1Q96S55 665 aa17.06■□□□□ 0.32
SS18-222ENST00000582792 TMOD2Q9NZR1 351 aa17.06■□□□□ 0.32
SS18-222ENST00000582792 RPAP1Q9BWH6 1393 aaPredicted RBP17.05■□□□□ 0.32
SS18-222ENST00000582792 MAST3O60307 1309 aa17.05■□□□□ 0.32
SS18-222ENST00000582792 BTBD19C9JJ37 291 aa17.05■□□□□ 0.32
SS18-222ENST00000582792 BCAMP50895 628 aa17.05■□□□□ 0.32
SS18-222ENST00000582792 SNAPC2Q13487 334 aa17.05■□□□□ 0.32
SS18-222ENST00000582792 APOBEC3HQ6NTF7 200 aaKnown RBP17.05■□□□□ 0.32
SS18-222ENST00000582792 ZKSCAN4Q969J2 545 aaPredicted RBP17.05■□□□□ 0.32
SS18-222ENST00000582792 SUGT1Q9Y2Z0 365 aa17.05■□□□□ 0.32
SS18-222ENST00000582792 KIF16BQ96L93 1317 aa17.04■□□□□ 0.32
SS18-222ENST00000582792 IRF6O14896 467 aa17.04■□□□□ 0.32
SS18-222ENST00000582792 LACTBP83111 547 aaPredicted RBP17.04■□□□□ 0.32
SS18-222ENST00000582792 PPIL2Q13356 520 aa17.04■□□□□ 0.32
SS18-222ENST00000582792 KIF22Q14807 665 aa17.04■□□□□ 0.32
SS18-222ENST00000582792 SLC4A8Q2Y0W8 1093 aa17.04■□□□□ 0.32
SS18-222ENST00000582792 ZSWIM8A7E2V4 1837 aa17.04■□□□□ 0.32
SS18-222ENST00000582792 GNRH1P01148 92 aa17.03■□□□□ 0.32
SS18-222ENST00000582792 DCAF15Q66K64 600 aa17.03■□□□□ 0.32
SS18-222ENST00000582792 HHIPL2Q6UWX4 724 aa17.03■□□□□ 0.32
SS18-222ENST00000582792 ARHGAP39Q9C0H5 1083 aa17.03■□□□□ 0.32
SS18-222ENST00000582792 FGFR2P21802 821 aa17.02■□□□□ 0.32
SS18-222ENST00000582792 PUM3Q15397 648 aaKnown RBP17.02■□□□□ 0.32
SS18-222ENST00000582792 KLHDC4Q8TBB5 520 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms