RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 UBE3CQ15386 1083 aa16■□□□□ 0.15
SRSF1-205ENST00000582730 TBC1D10CQ8IV04 446 aa16■□□□□ 0.15
SRSF1-205ENST00000582730 ZNF512BQ96KM6 892 aaPredicted RBP16■□□□□ 0.15
SRSF1-205ENST00000582730 ADCY5O95622 1261 aa16■□□□□ 0.15
SRSF1-205ENST00000582730 UVSSAQ2YD98 709 aa16■□□□□ 0.15
SRSF1-205ENST00000582730 C8orf37Q96NL8 207 aa16■□□□□ 0.15
SRSF1-205ENST00000582730 B4E1Z4 1266 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 MBD4O95243 580 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 FGFR2P21802 821 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 ZNF652Q9Y2D9 606 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 NTSR2O95665 410 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 CHMP4CQ96CF2 233 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 AK7Q96M32 723 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 FUCA2Q9BTY2 467 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 ARMT1Q9H993 441 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 TOMM22Q9NS69 142 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 ORC3Q9UBD5 711 aaPredicted RBP15.99■□□□□ 0.15
SRSF1-205ENST00000582730 PHLPP1O60346 1717 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 DHX16O60231 1041 aaKnown RBP15.99■□□□□ 0.15
SRSF1-205ENST00000582730 CCDC144CPQ8IYA2 1237 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 C8orf76Q96K31 380 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 USP28Q96RU2 1077 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 NAPBQ9H115 298 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 INCENPQ9NQS7 918 aa15.99■□□□□ 0.15
SRSF1-205ENST00000582730 DDX19AQ9NUU7 478 aaKnown RBP15.99■□□□□ 0.15
SRSF1-205ENST00000582730 DNTTIP2Q5QJE6 756 aaKnown RBP15.98■□□□□ 0.15
SRSF1-205ENST00000582730 SMARCC1Q92922 1105 aaPredicted RBP15.98■□□□□ 0.15
SRSF1-205ENST00000582730 GJB4Q9NTQ9 266 aa15.98■□□□□ 0.15
SRSF1-205ENST00000582730 FDPSP14324 419 aaKnown RBP15.98■□□□□ 0.15
SRSF1-205ENST00000582730 TYRO3Q06418 890 aa15.98■□□□□ 0.15
SRSF1-205ENST00000582730 CHRNDQ07001 517 aa15.98■□□□□ 0.15
SRSF1-205ENST00000582730 NFXL1Q6ZNB6 911 aa15.98■□□□□ 0.15
SRSF1-205ENST00000582730 NGLY1Q96IV0 654 aa15.98■□□□□ 0.15
SRSF1-205ENST00000582730 ZNF396Q96N95 335 aaPredicted RBP15.98■□□□□ 0.15
SRSF1-205ENST00000582730 NBPF3Q9H094 633 aa15.98■□□□□ 0.15
SRSF1-205ENST00000582730 LRP2BPQ9P2M1 347 aa15.98■□□□□ 0.15
SRSF1-205ENST00000582730 NWD2Q9ULI1 1742 aa15.98■□□□□ 0.15
SRSF1-205ENST00000582730 WNK3Q9BYP7 1800 aa15.98■□□□□ 0.15
SRSF1-205ENST00000582730 AKAP11Q9UKA4 1901 aa15.98■□□□□ 0.15
SRSF1-205ENST00000582730 ME1P48163 572 aa15.97■□□□□ 0.15
SRSF1-205ENST00000582730 RRP12Q5JTH9 1297 aaKnown RBP15.97■□□□□ 0.15
SRSF1-205ENST00000582730 MYRIPQ8NFW9 859 aa15.97■□□□□ 0.15
SRSF1-205ENST00000582730 CCDC94Q9BW85 323 aaPredicted RBP15.97■□□□□ 0.15
SRSF1-205ENST00000582730 SALL1Q9NSC2 1324 aa15.97■□□□□ 0.15
SRSF1-205ENST00000582730 POLR3DP05423 398 aaPredicted RBP15.97■□□□□ 0.15
SRSF1-205ENST00000582730 CYB5R4Q7L1T6 521 aa15.97■□□□□ 0.15
SRSF1-205ENST00000582730 MICU3Q86XE3 530 aa15.97■□□□□ 0.15
SRSF1-205ENST00000582730 MIGA1Q8NAN2 632 aa15.97■□□□□ 0.15
SRSF1-205ENST00000582730 NKX2-3Q8TAU0 364 aa15.97■□□□□ 0.15
SRSF1-205ENST00000582730 STRBPQ96SI9 672 aaKnown RBP15.97■□□□□ 0.15
SRSF1-205ENST00000582730 ABCF2Q9UG63 623 aa15.97■□□□□ 0.15
SRSF1-205ENST00000582730 MYH7P12883 1935 aa15.97■□□□□ 0.15
SRSF1-205ENST00000582730 TSC1Q92574 1164 aa15.97■□□□□ 0.15
SRSF1-205ENST00000582730 ZNF830Q96NB3 372 aaPredicted RBP15.97■□□□□ 0.15
SRSF1-205ENST00000582730 MYO5AQ9Y4I1 1855 aaKnown RBP15.96■□□□□ 0.15
SRSF1-205ENST00000582730 CTDSPL2Q05D32 466 aa15.96■□□□□ 0.15
SRSF1-205ENST00000582730 ERFEQ4G0M1 354 aa15.96■□□□□ 0.15
SRSF1-205ENST00000582730 CCAR1Q8IX12 1150 aaKnown RBP15.96■□□□□ 0.15
SRSF1-205ENST00000582730 ANGEL1Q9UNK9 670 aaKnown RBP15.96■□□□□ 0.15
SRSF1-205ENST00000582730 HPS5Q9UPZ3 1129 aa15.96■□□□□ 0.15
SRSF1-205ENST00000582730 TCRBV5S4A2TA0A5A2 114 aa15.96■□□□□ 0.14
SRSF1-205ENST00000582730 TDO2P48775 406 aa15.96■□□□□ 0.14
SRSF1-205ENST00000582730 LINC00116Q8NCU8 138 aa15.96■□□□□ 0.14
SRSF1-205ENST00000582730 CDC5LQ99459 802 aaKnown RBP15.96■□□□□ 0.14
SRSF1-205ENST00000582730 CLSTN2Q9H4D0 955 aa15.96■□□□□ 0.14
SRSF1-205ENST00000582730 PRKAB2O43741 272 aa15.95■□□□□ 0.14
SRSF1-205ENST00000582730 METAP2P50579 478 aaKnown RBP eCLIP15.95■□□□□ 0.142e-21■■■□□ 18.8
SRSF1-205ENST00000582730 ANO6Q4KMQ2 910 aa15.95■□□□□ 0.14
SRSF1-205ENST00000582730 CCDC73Q6ZRK6 1079 aa15.95■□□□□ 0.14
SRSF1-205ENST00000582730 BARGINQ6ZT62 677 aa15.95■□□□□ 0.14
SRSF1-205ENST00000582730 NEDD4P46934 1319 aa15.95■□□□□ 0.14
SRSF1-205ENST00000582730 ADD1P35611 737 aaKnown RBP15.95■□□□□ 0.14
SRSF1-205ENST00000582730 SF3A1Q15459 793 aaKnown RBP15.95■□□□□ 0.14
SRSF1-205ENST00000582730 LUZP1Q86V48 1076 aa15.95■□□□□ 0.14
SRSF1-205ENST00000582730 IFNL3Q8IZI9 196 aa15.95■□□□□ 0.14
SRSF1-205ENST00000582730 MYL10Q9BUA6 226 aa15.95■□□□□ 0.14
SRSF1-205ENST00000582730 PODXL2Q9NZ53 605 aa15.95■□□□□ 0.14
SRSF1-205ENST00000582730 MRVI1Q9Y6F6 885 aa15.95■□□□□ 0.14
SRSF1-205ENST00000582730 MYH14Q7Z406 1995 aaKnown RBP15.95■□□□□ 0.14
SRSF1-205ENST00000582730 EVCP57679 992 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 SENP2Q9HC62 589 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 ZHX1Q9UKY1 873 aaPredicted RBP15.94■□□□□ 0.14
SRSF1-205ENST00000582730 SLC4A4Q9Y6R1 1079 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 TOM1O60784 492 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 GYG1P46976 350 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 PTF1AQ7RTS3 328 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 VPS37DQ86XT2 251 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 ANKRD18AQ8IVF6 992 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 CCDC24Q8N4L8 307 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 FAM200AQ8TCP9 573 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 EPB41L4AQ9HCS5 686 aaPredicted RBP15.94■□□□□ 0.14
SRSF1-205ENST00000582730 ATRNO75882 1429 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 PATL2C9JE40 543 aaKnown RBP15.94■□□□□ 0.14
SRSF1-205ENST00000582730 TMEM67Q5HYA8 995 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 FAM182BQ5T319 152 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 C3orf67Q6ZVT6 689 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 LCORLQ8N3X6 602 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 FBXL16Q8N461 479 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 SPC24Q8NBT2 197 aa15.94■□□□□ 0.14
SRSF1-205ENST00000582730 NRAPQ86VF7 1730 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms