RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 WTAPQ15007 396 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 Q6ZUG5 572 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 GGA1Q9UJY5 639 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 MYO1BO43795 1136 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 TMEM67Q5HYA8 995 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 CCDC148Q8NFR7 591 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 IFIT3O14879 490 aaKnown RBP11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 IARSP41252 1262 aaKnown RBP11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 NASPP49321 788 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 GRAPQ13588 217 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 EPHA10Q5JZY3 1008 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 TSHZ3Q63HK5 1081 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 GRAPLQ8TC17 118 aaPredicted RBP11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 BRIP1Q9BX63 1249 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 NUP62CLQ9H1M0 184 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 SLC4A4Q9Y6R1 1079 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 PDE6AP16499 860 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 TIMM10P62072 90 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 GRPEL1Q9HAV7 217 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 LDHBP07195 334 aaKnown RBP11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 HSPD1P10809 573 aaKnown RBP11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 CHAF1AQ13111 956 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 TEX2Q8IWB9 1127 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 TTC14Q96N46 770 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 QTRT2Q9H974 415 aaKnown RBP11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 STK32BQ9NY57 414 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 ATRNO75882 1429 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 C5P01031 1676 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 A0A0D9SFI3 127 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 HLA-DOAP06340 250 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 USP5P45974 858 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 MAP3K11Q16584 847 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 KAZALD1Q96I82 304 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 CRAMP1Q96RY5 1269 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 USP25Q9UHP3 1055 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 STK36Q9NRP7 1315 aa11.78□□□□□ -0.52
TRAPPC8-211ENST00000582539 NTSR2O95665 410 aa11.77□□□□□ -0.52
TRAPPC8-211ENST00000582539 LIFRP42702 1097 aa11.77□□□□□ -0.52
TRAPPC8-211ENST00000582539 GALNT17Q6IS24 598 aa11.77□□□□□ -0.52
TRAPPC8-211ENST00000582539 ANKRD20A12PQ8NF67 263 aa11.77□□□□□ -0.52
TRAPPC8-211ENST00000582539 CHRNDQ07001 517 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 SUSD4Q5VX71 490 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 INTS5Q6P9B9 1019 aaKnown RBP11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 SEPT12Q8IYM1 358 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 FAM227BQ96M60 508 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 ABCF2Q9UG63 623 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 PNMA2Q9UL42 364 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 FAM177BA6PVY3 158 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 hCG_1984214I3L0E3 225 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 DDAH1O94760 285 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 ZAP70P43403 619 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 LRRC24Q50LG9 513 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 C15orf52Q6ZUT6 534 aaKnown RBP11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 TTC6Q86TZ1 520 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 ZNF444Q8N0Y2 327 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 ZNF713Q8N859 430 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 BRF1Q92994 677 aa11.77□□□□□ -0.53
TRAPPC8-211ENST00000582539 SMTNL1A8MU46 457 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 E7EWF7 191 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 CCP110O43303 1012 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 AKNAD1Q5T1N1 836 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 ORC3Q9UBD5 711 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 WNK3Q9BYP7 1800 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 RTN1Q16799 776 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 LRSAM1Q6UWE0 723 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 MAGEB6Q8N7X4 407 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 KIF2CQ99661 725 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 STK24Q9Y6E0 443 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 BECN2A8MW95 431 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 YEATS4O95619 227 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 CNKSR1Q969H4 720 aa11.76□□□□□ -0.53
TRAPPC8-211ENST00000582539 KLF18A0A0U1RQI7 1052 aa11.75□□□□□ -0.53
TRAPPC8-211ENST00000582539 CAVIN1Q6NZI2 390 aaKnown RBP11.75□□□□□ -0.53
TRAPPC8-211ENST00000582539 OLFM4Q6UX06 510 aa11.75□□□□□ -0.53
TRAPPC8-211ENST00000582539 BICDL1Q6ZP65 573 aa11.75□□□□□ -0.53
TRAPPC8-211ENST00000582539 ZNF532Q9HCE3 1301 aa11.75□□□□□ -0.53
TRAPPC8-211ENST00000582539 TNMDQ9H2S6 317 aa11.75□□□□□ -0.53
TRAPPC8-211ENST00000582539 ANO10Q9NW15 660 aa11.75□□□□□ -0.53
TRAPPC8-211ENST00000582539 DEXIO95424 95 aa11.75□□□□□ -0.53
TRAPPC8-211ENST00000582539 TPM2P07951 284 aa11.75□□□□□ -0.53
TRAPPC8-211ENST00000582539 SYT1P21579 422 aa11.75□□□□□ -0.53
TRAPPC8-211ENST00000582539 ZNF804BA4D1E1 1349 aa11.75□□□□□ -0.53
TRAPPC8-211ENST00000582539 NEMFO60524 1076 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 HCLS1P14317 486 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 DDIT3P35638 169 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 CBFA2T2O43439 604 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 MBD4O95243 580 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 NPR1P16066 1061 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 SEMA3FQ13275 785 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 ZNF594Q96JF6 807 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 LRRC27Q9C0I9 530 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 HDAC9Q9UKV0 1011 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 POLR3DP05423 398 aaPredicted RBP11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 CEP57L1Q8IYX8 460 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 BCL9LQ86UU0 1499 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 SALL1Q9NSC2 1324 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 PPP1R2P41236 205 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 PTH1RQ03431 593 aa11.74□□□□□ -0.53
TRAPPC8-211ENST00000582539 HLFQ16534 295 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms