RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 FOXN1O15353 648 aa15.22■□□□□ 0.03
SRSF1-204ENST00000581979 PDE8BO95263 885 aa15.22■□□□□ 0.03
SRSF1-204ENST00000581979 CHRNDQ07001 517 aa15.22■□□□□ 0.03
SRSF1-204ENST00000581979 GORABQ5T7V8 394 aa15.22■□□□□ 0.03
SRSF1-204ENST00000581979 KRT26Q7Z3Y9 468 aa15.22■□□□□ 0.03
SRSF1-204ENST00000581979 TXNRD3Q86VQ6 643 aa15.22■□□□□ 0.03
SRSF1-204ENST00000581979 DDRGK1Q96HY6 314 aa15.22■□□□□ 0.03
SRSF1-204ENST00000581979 ARAP2Q8WZ64 1704 aa15.21■□□□□ 0.03
SRSF1-204ENST00000581979 ZNF646O15015 1829 aaPredicted RBP15.21■□□□□ 0.03
SRSF1-204ENST00000581979 USP17L8P0C7I0 530 aa15.21■□□□□ 0.03
SRSF1-204ENST00000581979 CYP4F22Q6NT55 531 aa15.21■□□□□ 0.03
SRSF1-204ENST00000581979 DCPSQ96C86 337 aaKnown RBP15.21■□□□□ 0.03
SRSF1-204ENST00000581979 XAGE2Q96GT9 111 aa15.21■□□□□ 0.03
SRSF1-204ENST00000581979 REC8O95072 547 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 MAP2K1Q02750 393 aaPredicted RBP15.2■□□□□ 0.02
SRSF1-204ENST00000581979 CCDC158Q5M9N0 1113 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 DACT2Q5SW24 774 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 STRIP1Q5VSL9 837 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 VGLL2Q8N8G2 317 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 AIDAQ96BJ3 306 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 IPO9Q96P70 1041 aaKnown RBP15.2■□□□□ 0.02
SRSF1-204ENST00000581979 ESYT1Q9BSJ8 1104 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 A0A1B0GUL6 1792 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 KLRK1P26718 216 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 ADORA1P30542 326 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 CTCFP49711 727 aaPredicted RBP15.2■□□□□ 0.02
SRSF1-204ENST00000581979 TTC39AQ5SRH9 613 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 C15orf52Q6ZUT6 534 aaKnown RBP15.2■□□□□ 0.02
SRSF1-204ENST00000581979 HELBQ8NG08 1087 aaPredicted RBP15.2■□□□□ 0.02
SRSF1-204ENST00000581979 DNAJC2Q99543 621 aaKnown RBP15.2■□□□□ 0.02
SRSF1-204ENST00000581979 FSD1Q9BTV5 496 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 ZNF408Q9H9D4 720 aa15.2■□□□□ 0.02
SRSF1-204ENST00000581979 MYO3BQ8WXR4 1341 aa15.19■□□□□ 0.02
SRSF1-204ENST00000581979 IRS2Q9Y4H2 1338 aa15.19■□□□□ 0.02
SRSF1-204ENST00000581979 IFIT1P09914 478 aaKnown RBP15.19■□□□□ 0.02
SRSF1-204ENST00000581979 MAP2K2P36507 400 aa15.19■□□□□ 0.02
SRSF1-204ENST00000581979 PUM3Q15397 648 aaKnown RBP15.19■□□□□ 0.02
SRSF1-204ENST00000581979 DLK2Q6UY11 383 aa15.19■□□□□ 0.02
SRSF1-204ENST00000581979 PAXIP1Q6ZW49 1069 aaPredicted RBP15.19■□□□□ 0.02
SRSF1-204ENST00000581979 HAUS7Q99871 368 aa15.19■□□□□ 0.02
SRSF1-204ENST00000581979 MYOZ2Q9NPC6 264 aa15.19■□□□□ 0.02
SRSF1-204ENST00000581979 PRDM10Q9NQV6 1147 aa15.19■□□□□ 0.02
SRSF1-204ENST00000581979 DIAPH3Q9NSV4 1193 aa15.19■□□□□ 0.02
SRSF1-204ENST00000581979 GGA3Q9NZ52 723 aa15.19■□□□□ 0.02
SRSF1-204ENST00000581979 ASTN2O75129 1339 aaPredicted RBP15.18■□□□□ 0.02
SRSF1-204ENST00000581979 ADM5C9JUS6 153 aa15.18■□□□□ 0.02
SRSF1-204ENST00000581979 HIP1O00291 1037 aa15.18■□□□□ 0.02
SRSF1-204ENST00000581979 RBM25P49756 843 aaKnown RBP15.18■□□□□ 0.02
SRSF1-204ENST00000581979 MMP14P50281 582 aa15.18■□□□□ 0.02
SRSF1-204ENST00000581979 SCARF1Q14162 830 aa15.18■□□□□ 0.02
SRSF1-204ENST00000581979 TNS4Q8IZW8 715 aa15.18■□□□□ 0.02
SRSF1-204ENST00000581979 TAF5LO75529 589 aa15.17■□□□□ 0.02
SRSF1-204ENST00000581979 SLC5A1P13866 664 aa15.17■□□□□ 0.02
SRSF1-204ENST00000581979 KCNJ4P48050 445 aa15.17■□□□□ 0.02
SRSF1-204ENST00000581979 SULF1Q8IWU6 871 aa15.17■□□□□ 0.02
SRSF1-204ENST00000581979 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.17■□□□□ 0.02
SRSF1-204ENST00000581979 RUFY2Q8WXA3 655 aa15.17■□□□□ 0.02
SRSF1-204ENST00000581979 LPIN2Q92539 896 aa15.17■□□□□ 0.02
SRSF1-204ENST00000581979 PITPNM2Q9BZ72 1349 aa15.17■□□□□ 0.02
SRSF1-204ENST00000581979 ANGEL2Q5VTE6 544 aaKnown RBP15.17■□□□□ 0.02
SRSF1-204ENST00000581979 TTLL5Q6EMB2 1281 aa15.17■□□□□ 0.02
SRSF1-204ENST00000581979 CWC27Q6UX04 472 aaKnown RBP15.17■□□□□ 0.02
SRSF1-204ENST00000581979 EDC3Q96F86 508 aaKnown RBP15.17■□□□□ 0.02
SRSF1-204ENST00000581979 MXD3Q9BW11 206 aa15.17■□□□□ 0.02
SRSF1-204ENST00000581979 USP26Q9BXU7 913 aa15.17■□□□□ 0.02
SRSF1-204ENST00000581979 CD209Q9NNX6 404 aa15.17■□□□□ 0.02
SRSF1-204ENST00000581979 NDUFB9Q9Y6M9 179 aa15.17■□□□□ 0.02
SRSF1-204ENST00000581979 SNAP23O00161 211 aa15.16■□□□□ 0.02
SRSF1-204ENST00000581979 FGFR2P21802 821 aa15.16■□□□□ 0.02
SRSF1-204ENST00000581979 GRM1Q13255 1194 aa15.16■□□□□ 0.02
SRSF1-204ENST00000581979 OGFOD1Q8N543 542 aa15.16■□□□□ 0.02
SRSF1-204ENST00000581979 GBA2Q9HCG7 927 aaPredicted RBP15.16■□□□□ 0.02
SRSF1-204ENST00000581979 ANO2Q9NQ90 1003 aa15.16■□□□□ 0.02
SRSF1-204ENST00000581979 AOC2O75106 756 aa15.15■□□□□ 0.02
SRSF1-204ENST00000581979 HSPA8P11142 646 aaKnown RBP15.15■□□□□ 0.02
SRSF1-204ENST00000581979 HUNKP57058 714 aa15.15■□□□□ 0.02
SRSF1-204ENST00000581979 C2orf69Q8N8R5 385 aa15.15■□□□□ 0.02
SRSF1-204ENST00000581979 PAG1Q9NWQ8 432 aa15.15■□□□□ 0.02
SRSF1-204ENST00000581979 RFX7Q2KHR2 1363 aa15.15■□□□□ 0.02
SRSF1-204ENST00000581979 GOLIM4O00461 696 aa15.14■□□□□ 0.01
SRSF1-204ENST00000581979 SGSM2O43147 1006 aa15.14■□□□□ 0.01
SRSF1-204ENST00000581979 LBX1P52954 281 aa15.14■□□□□ 0.01
SRSF1-204ENST00000581979 GTF2IP78347 998 aa15.14■□□□□ 0.01
SRSF1-204ENST00000581979 FBXW7Q969H0 707 aa15.14■□□□□ 0.01
SRSF1-204ENST00000581979 CDCA5Q96FF9 252 aa15.14■□□□□ 0.01
SRSF1-204ENST00000581979 IL1R1P14778 569 aa15.14■□□□□ 0.01
SRSF1-204ENST00000581979 NBPF9Q3BBW0 867 aa15.14■□□□□ 0.01
SRSF1-204ENST00000581979 WNT10BO00744 389 aa15.13■□□□□ 0.01
SRSF1-204ENST00000581979 UQCRFS1P1P0C7P4 283 aa15.13■□□□□ 0.01
SRSF1-204ENST00000581979 MCCP23508 829 aa15.13■□□□□ 0.01
SRSF1-204ENST00000581979 NOGQ13253 232 aa15.13■□□□□ 0.01
SRSF1-204ENST00000581979 NMIQ13287 307 aaPredicted RBP15.13■□□□□ 0.01
SRSF1-204ENST00000581979 CCDC102BQ68D86 513 aa15.13■□□□□ 0.01
SRSF1-204ENST00000581979 KIAA1211Q6ZU35 1233 aa15.13■□□□□ 0.01
SRSF1-204ENST00000581979 ZNF804AQ7Z570 1209 aa15.13■□□□□ 0.01
SRSF1-204ENST00000581979 KBTBD3Q8NAB2 608 aa15.13■□□□□ 0.01
SRSF1-204ENST00000581979 BEGAINQ9BUH8 593 aa15.13■□□□□ 0.01
SRSF1-204ENST00000581979 IL25Q9H293 177 aa15.13■□□□□ 0.01
SRSF1-204ENST00000581979 DAXXQ9UER7 740 aaPredicted RBP15.13■□□□□ 0.01
SRSF1-204ENST00000581979 RGMBQ6NW40 437 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms