RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 PMEPA1Q969W9 287 aa6.9□□□□□ -1.3
SMG8-205ENST00000580798 SLC5A6Q9Y289 635 aa6.9□□□□□ -1.3
SMG8-205ENST00000580798 ACTL7BQ9Y614 415 aa6.9□□□□□ -1.3
SMG8-205ENST00000580798 GSTM4Q03013 218 aa6.89□□□□□ -1.31
SMG8-205ENST00000580798 PLCL1Q15111 1095 aa6.89□□□□□ -1.31
SMG8-205ENST00000580798 SPRED2Q7Z698 418 aa6.89□□□□□ -1.31
SMG8-205ENST00000580798 NRSN2Q9GZP1 204 aa6.89□□□□□ -1.31
SMG8-205ENST00000580798 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.88□□□□□ -1.31
SMG8-205ENST00000580798 BIN1O00499 593 aa6.88□□□□□ -1.31
SMG8-205ENST00000580798 RAB6AP20340 208 aa6.88□□□□□ -1.31
SMG8-205ENST00000580798 CYP27A1Q02318 531 aa6.88□□□□□ -1.31
SMG8-205ENST00000580798 DNM1Q05193 864 aaKnown RBP6.88□□□□□ -1.31
SMG8-205ENST00000580798 MAP7Q14244 749 aa6.88□□□□□ -1.31
SMG8-205ENST00000580798 C8orf34Q49A92 452 aa6.88□□□□□ -1.31
SMG8-205ENST00000580798 ASAP3Q8TDY4 903 aa6.88□□□□□ -1.31
SMG8-205ENST00000580798 SEMA6CQ9H3T2 930 aa6.88□□□□□ -1.31
SMG8-205ENST00000580798 SEPT3Q9UH03 358 aa6.88□□□□□ -1.31
SMG8-205ENST00000580798 EREGO14944 169 aa6.87□□□□□ -1.31
SMG8-205ENST00000580798 PDGFAP04085 211 aa6.87□□□□□ -1.31
SMG8-205ENST00000580798 SRPK2P78362 688 aaKnown RBP6.87□□□□□ -1.31
SMG8-205ENST00000580798 BHLHE41Q9C0J9 482 aaPredicted RBP6.87□□□□□ -1.31
SMG8-205ENST00000580798 FARP2O94887 1054 aaPredicted RBP6.86□□□□□ -1.31
SMG8-205ENST00000580798 CTSBP07858 339 aa6.86□□□□□ -1.31
SMG8-205ENST00000580798 TMEM164Q5U3C3 297 aa6.86□□□□□ -1.31
SMG8-205ENST00000580798 C1GALT1Q9NS00 363 aa6.86□□□□□ -1.31
SMG8-205ENST00000580798 FAM105AQ9NUU6 356 aa6.86□□□□□ -1.31
SMG8-205ENST00000580798 SLAIN2Q9P270 581 aa6.86□□□□□ -1.31
SMG8-205ENST00000580798 KRTAP9-7A8MTY7 169 aa6.85□□□□□ -1.31
SMG8-205ENST00000580798 PCSK2P16519 638 aa6.85□□□□□ -1.31
SMG8-205ENST00000580798 SEZ6L2Q6UXD5 910 aa6.85□□□□□ -1.31
SMG8-205ENST00000580798 CLP1Q92989 425 aaKnown RBP6.85□□□□□ -1.31
SMG8-205ENST00000580798 ACSS3Q9H6R3 686 aa6.85□□□□□ -1.31
SMG8-205ENST00000580798 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.84□□□□□ -1.31
SMG8-205ENST00000580798 METTL12A8MUP2 240 aa6.84□□□□□ -1.31
SMG8-205ENST00000580798 DYNC1LI2O43237 492 aaPredicted RBP6.84□□□□□ -1.31
SMG8-205ENST00000580798 ATG7O95352 703 aa6.84□□□□□ -1.31
SMG8-205ENST00000580798 EDN3P14138 238 aa6.84□□□□□ -1.31
SMG8-205ENST00000580798 BNIP3Q12983 259 aa6.84□□□□□ -1.31
SMG8-205ENST00000580798 PEAR1Q5VY43 1037 aaPredicted RBP6.84□□□□□ -1.31
SMG8-205ENST00000580798 DYMQ7RTS9 669 aa6.84□□□□□ -1.31
SMG8-205ENST00000580798 ATG4DQ86TL0 474 aaPredicted RBP6.84□□□□□ -1.31
SMG8-205ENST00000580798 STK11IPQ8N1F8 1099 aa6.84□□□□□ -1.31
SMG8-205ENST00000580798 GLIS3Q8NEA6 775 aa6.84□□□□□ -1.31
SMG8-205ENST00000580798 FAM168AQ92567 244 aa6.84□□□□□ -1.31
SMG8-205ENST00000580798 MAOBP27338 520 aa6.83□□□□□ -1.32
SMG8-205ENST00000580798 MZF1P28698 734 aaPredicted RBP6.83□□□□□ -1.32
SMG8-205ENST00000580798 PKN1Q16512 942 aa6.83□□□□□ -1.32
SMG8-205ENST00000580798 OGFOD3Q6PK18 319 aa6.83□□□□□ -1.32
SMG8-205ENST00000580798 TTC16Q8NEE8 873 aa6.83□□□□□ -1.32
SMG8-205ENST00000580798 LATS2Q9NRM7 1088 aa6.83□□□□□ -1.32
SMG8-205ENST00000580798 EIF4EBP3O60516 100 aaPredicted RBP6.82□□□□□ -1.32
SMG8-205ENST00000580798 PHACTR2O75167 634 aa6.82□□□□□ -1.32
SMG8-205ENST00000580798 TNFRSF21O75509 655 aa6.82□□□□□ -1.32
SMG8-205ENST00000580798 FUT4P22083 530 aa6.82□□□□□ -1.32
SMG8-205ENST00000580798 NOM1Q5C9Z4 860 aaKnown RBP6.82□□□□□ -1.32
SMG8-205ENST00000580798 AKAP4Q5JQC9 854 aa6.82□□□□□ -1.32
SMG8-205ENST00000580798 KSR1Q8IVT5 923 aa6.82□□□□□ -1.32
SMG8-205ENST00000580798 HELQQ8TDG4 1101 aa6.82□□□□□ -1.32
SMG8-205ENST00000580798 GSX1Q9H4S2 264 aaPredicted RBP6.82□□□□□ -1.32
SMG8-205ENST00000580798 RC3H2Q9HBD1 1191 aaKnown RBP6.82□□□□□ -1.32
SMG8-205ENST00000580798 RNASE1P07998 156 aaKnown RBP6.81□□□□□ -1.32
SMG8-205ENST00000580798 CD8BP10966 210 aa6.81□□□□□ -1.32
SMG8-205ENST00000580798 ASPAP45381 313 aa6.81□□□□□ -1.32
SMG8-205ENST00000580798 TMEM40Q8WWA1 233 aa6.81□□□□□ -1.32
SMG8-205ENST00000580798 MISP3Q96FF7 219 aa6.81□□□□□ -1.32
SMG8-205ENST00000580798 KRTAP4-5Q9BYR2 181 aa6.81□□□□□ -1.32
SMG8-205ENST00000580798 MBNL3Q9NUK0 354 aaKnown RBP6.81□□□□□ -1.32
SMG8-205ENST00000580798 FOXD3Q9UJU5 478 aaPredicted RBP6.81□□□□□ -1.32
SMG8-205ENST00000580798 ADAMTS6Q9UKP5 1117 aa6.81□□□□□ -1.32
SMG8-205ENST00000580798 AP4E1Q9UPM8 1137 aa6.81□□□□□ -1.32
SMG8-205ENST00000580798 ATP2B4P23634 1241 aa6.8□□□□□ -1.32
SMG8-205ENST00000580798 EIF1AXP47813 144 aaKnown RBP6.8□□□□□ -1.32
SMG8-205ENST00000580798 POU4F3Q15319 338 aa6.8□□□□□ -1.32
SMG8-205ENST00000580798 ZNF423Q2M1K9 1284 aa6.8□□□□□ -1.32
SMG8-205ENST00000580798 PLD6Q8N2A8 252 aaKnown RBP6.8□□□□□ -1.32
SMG8-205ENST00000580798 SNX29Q8TEQ0 813 aa6.8□□□□□ -1.32
SMG8-205ENST00000580798 LGR6Q9HBX8 967 aa6.8□□□□□ -1.32
SMG8-205ENST00000580798 POLIQ9UNA4 740 aa6.8□□□□□ -1.32
SMG8-205ENST00000580798 DAGLAQ9Y4D2 1042 aa6.8□□□□□ -1.32
SMG8-205ENST00000580798 ECEL1O95672 775 aa6.79□□□□□ -1.32
SMG8-205ENST00000580798 CYP11A1P05108 521 aa6.79□□□□□ -1.32
SMG8-205ENST00000580798 MPSTP25325 297 aa6.79□□□□□ -1.32
SMG8-205ENST00000580798 PCDH1Q08174 1060 aa6.79□□□□□ -1.32
SMG8-205ENST00000580798 PBXIP1Q96AQ6 731 aa6.79□□□□□ -1.32
SMG8-205ENST00000580798 RAD18Q9NS91 495 aa6.79□□□□□ -1.32
SMG8-205ENST00000580798 CD96P40200 585 aa6.78□□□□□ -1.32
SMG8-205ENST00000580798 MESP2Q0VG99 397 aa6.78□□□□□ -1.32
SMG8-205ENST00000580798 CYP27C1Q4G0S4 372 aa6.78□□□□□ -1.32
SMG8-205ENST00000580798 HP1BP3Q5SSJ5 553 aaPredicted RBP6.78□□□□□ -1.32
SMG8-205ENST00000580798 LRRN4CLQ8ND94 238 aa6.78□□□□□ -1.32
SMG8-205ENST00000580798 CCER1Q8TC90 406 aaPredicted RBP6.78□□□□□ -1.32
SMG8-205ENST00000580798 NETO1Q8TDF5 533 aa6.78□□□□□ -1.32
SMG8-205ENST00000580798 SLC38A3Q99624 504 aa6.78□□□□□ -1.32
SMG8-205ENST00000580798 CLEC4MQ9H2X3 399 aaPredicted RBP6.78□□□□□ -1.32
SMG8-205ENST00000580798 AMOTL2Q9Y2J4 779 aa6.78□□□□□ -1.32
SMG8-205ENST00000580798 A0A096LPE4 126 aa6.77□□□□□ -1.33
SMG8-205ENST00000580798 A0A1W2PPZ6 126 aa6.77□□□□□ -1.33
SMG8-205ENST00000580798 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
SMG8-205ENST00000580798 HOMEZQ8IX15 550 aa6.77□□□□□ -1.33
SMG8-205ENST00000580798 FAM181AQ8N9Y4 354 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms