RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 LMOD1P29536 600 aaPredicted RBP17.27■□□□□ 0.36
SKA2-205ENST00000580541 CASC1Q6TDU7 716 aa17.27■□□□□ 0.36
SKA2-205ENST00000580541 NOL10Q9BSC4 688 aaKnown RBP17.27■□□□□ 0.36
SKA2-205ENST00000580541 TTF2Q9UNY4 1162 aaKnown RBP17.27■□□□□ 0.36
SKA2-205ENST00000580541 SDSP20132 328 aa17.26■□□□□ 0.35
SKA2-205ENST00000580541 SLC9C2Q5TAH2 1124 aa17.26■□□□□ 0.35
SKA2-205ENST00000580541 NAA16Q6N069 864 aaPredicted RBP17.26■□□□□ 0.35
SKA2-205ENST00000580541 CERS3Q8IU89 383 aa17.26■□□□□ 0.35
SKA2-205ENST00000580541 ANTXR1Q9H6X2 564 aa17.26■□□□□ 0.35
SKA2-205ENST00000580541 PIH1D3Q9NQM4 214 aaKnown RBP17.26■□□□□ 0.35
SKA2-205ENST00000580541 NDUFB9Q9Y6M9 179 aa17.26■□□□□ 0.35
SKA2-205ENST00000580541 PSME4Q14997 1843 aa17.26■□□□□ 0.35
SKA2-205ENST00000580541 SCN9AQ15858 1988 aa17.26■□□□□ 0.35
SKA2-205ENST00000580541 EIF5BO60841 1220 aaKnown RBP17.25■□□□□ 0.35
SKA2-205ENST00000580541 KIAA0825Q8IV33 1275 aa17.25■□□□□ 0.35
SKA2-205ENST00000580541 TEKT1Q969V4 418 aa17.25■□□□□ 0.35
SKA2-205ENST00000580541 GMLQ99445 158 aa17.25■□□□□ 0.35
SKA2-205ENST00000580541 SERPINA10Q9UK55 444 aa17.25■□□□□ 0.35
SKA2-205ENST00000580541 COL4A5P29400 1685 aa17.25■□□□□ 0.35
SKA2-205ENST00000580541 ZNF541Q9H0D2 1346 aa17.24■□□□□ 0.35
SKA2-205ENST00000580541 F8W031 263 aaPredicted RBP17.24■□□□□ 0.35
SKA2-205ENST00000580541 RNF113AO15541 343 aaKnown RBP17.24■□□□□ 0.35
SKA2-205ENST00000580541 BAG3O95817 575 aa17.24■□□□□ 0.35
SKA2-205ENST00000580541 GSPT1P15170 499 aaKnown RBP17.24■□□□□ 0.35
SKA2-205ENST00000580541 PRDX5P30044 214 aa17.24■□□□□ 0.35
SKA2-205ENST00000580541 GMPSP49915 693 aaPredicted RBP17.24■□□□□ 0.35
SKA2-205ENST00000580541 MECOMQ03112 1051 aa17.24■□□□□ 0.35
SKA2-205ENST00000580541 UBE3CQ15386 1083 aa17.24■□□□□ 0.35
SKA2-205ENST00000580541 HHIPL2Q6UWX4 724 aa17.24■□□□□ 0.35
SKA2-205ENST00000580541 CERS5Q8N5B7 392 aa17.24■□□□□ 0.35
SKA2-205ENST00000580541 RUFY2Q8WXA3 655 aa17.24■□□□□ 0.35
SKA2-205ENST00000580541 NSUN4Q96CB9 384 aaKnown RBP17.24■□□□□ 0.35
SKA2-205ENST00000580541 EDC3Q96F86 508 aaKnown RBP17.24■□□□□ 0.35
SKA2-205ENST00000580541 FAM163AQ96GL9 167 aaPredicted RBP17.24■□□□□ 0.35
SKA2-205ENST00000580541 CNOT7Q9UIV1 285 aaKnown RBP17.24■□□□□ 0.35
SKA2-205ENST00000580541 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
SKA2-205ENST00000580541 RFX7Q2KHR2 1363 aa17.24■□□□□ 0.35
SKA2-205ENST00000580541 COL1A1P02452 1464 aaPredicted RBP17.24■□□□□ 0.35
SKA2-205ENST00000580541 IQCA1LA6NCM1 817 aa17.23■□□□□ 0.35
SKA2-205ENST00000580541 DDNO94850 711 aaPredicted RBP17.23■□□□□ 0.35
SKA2-205ENST00000580541 RBM5P52756 815 aaKnown RBP eCLIP17.23■□□□□ 0.35
SKA2-205ENST00000580541 SKAP1Q86WV1 359 aa17.23■□□□□ 0.35
SKA2-205ENST00000580541 MAGEB6Q8N7X4 407 aa17.23■□□□□ 0.35
SKA2-205ENST00000580541 MXD3Q9BW11 206 aa17.23■□□□□ 0.35
SKA2-205ENST00000580541 DIAPH3Q9NSV4 1193 aa17.23■□□□□ 0.35
SKA2-205ENST00000580541 PDE6AP16499 860 aa17.22■□□□□ 0.35
SKA2-205ENST00000580541 PLCG2P16885 1265 aa17.22■□□□□ 0.35
SKA2-205ENST00000580541 CYP7A1P22680 504 aa17.22■□□□□ 0.35
SKA2-205ENST00000580541 ADD2P35612 726 aa17.22■□□□□ 0.35
SKA2-205ENST00000580541 MFAP1P55081 439 aaKnown RBP17.22■□□□□ 0.35
SKA2-205ENST00000580541 DLGAP5Q15398 846 aa17.22■□□□□ 0.35
SKA2-205ENST00000580541 L3MBTL3Q96JM7 780 aaPredicted RBP17.22■□□□□ 0.35
SKA2-205ENST00000580541 GPRC5DQ9NZD1 345 aa17.22■□□□□ 0.35
SKA2-205ENST00000580541 UTRNP46939 3433 aa17.22■□□□□ 0.35
SKA2-205ENST00000580541 AK9Q5TCS8 1911 aa17.21■□□□□ 0.35
SKA2-205ENST00000580541 MYO1BO43795 1136 aa17.21■□□□□ 0.35
SKA2-205ENST00000580541 ZNF280AP59817 542 aaPredicted RBP17.21■□□□□ 0.35
SKA2-205ENST00000580541 MICALL2Q8IY33 904 aa17.21■□□□□ 0.35
SKA2-205ENST00000580541 APPBP2Q92624 585 aa17.21■□□□□ 0.35
SKA2-205ENST00000580541 HELLSQ9NRZ9 838 aa17.21■□□□□ 0.35
SKA2-205ENST00000580541 TIAM2Q8IVF5 1701 aa17.21■□□□□ 0.35
SKA2-205ENST00000580541 CDC45O75419 566 aa17.2■□□□□ 0.34
SKA2-205ENST00000580541 CRKP46108 304 aa17.2■□□□□ 0.34
SKA2-205ENST00000580541 SCNN1DP51172 638 aa17.2■□□□□ 0.34
SKA2-205ENST00000580541 MTMR14Q8NCE2 650 aa17.2■□□□□ 0.34
SKA2-205ENST00000580541 ZDHHC15Q96MV8 337 aa17.2■□□□□ 0.34
SKA2-205ENST00000580541 MYOZ2Q9NPC6 264 aa17.2■□□□□ 0.34
SKA2-205ENST00000580541 HACL1Q9UJ83 578 aa17.2■□□□□ 0.34
SKA2-205ENST00000580541 ZNF532Q9HCE3 1301 aa17.2■□□□□ 0.34
SKA2-205ENST00000580541 NPM3O75607 178 aaKnown RBP17.19■□□□□ 0.34
SKA2-205ENST00000580541 CFAP100Q494V2 611 aa17.19■□□□□ 0.34
SKA2-205ENST00000580541 AIDAQ96BJ3 306 aa17.19■□□□□ 0.34
SKA2-205ENST00000580541 ADARB2Q9NS39 739 aaKnown RBP17.19■□□□□ 0.34
SKA2-205ENST00000580541 MROH7-TTC4A0A0A0MT08 1334 aa17.19■□□□□ 0.34
SKA2-205ENST00000580541 MYH7P12883 1935 aa17.18■□□□□ 0.34
SKA2-205ENST00000580541 GPR75-ASB3A0A0A6YYF3 556 aa17.18■□□□□ 0.34
SKA2-205ENST00000580541 MAGEB6P1A0A0J9YX57 407 aa17.18■□□□□ 0.34
SKA2-205ENST00000580541 PPP4CP60510 307 aa17.18■□□□□ 0.34
SKA2-205ENST00000580541 GRIK5Q16478 980 aa17.18■□□□□ 0.34
SKA2-205ENST00000580541 MCMDC2Q4G0Z9 681 aa17.18■□□□□ 0.34
SKA2-205ENST00000580541 PNMA8AQ86V59 439 aaPredicted RBP17.18■□□□□ 0.34
SKA2-205ENST00000580541 TMOD2Q9NZR1 351 aa17.18■□□□□ 0.34
SKA2-205ENST00000580541 GAKO14976 1311 aa17.18■□□□□ 0.34
SKA2-205ENST00000580541 MYH2Q9UKX2 1941 aa17.17■□□□□ 0.34
SKA2-205ENST00000580541 DOCK2Q92608 1830 aa17.17■□□□□ 0.34
SKA2-205ENST00000580541 TCRBV5S4A2TA0A5A2 114 aa17.17■□□□□ 0.34
SKA2-205ENST00000580541 VEGFAP15692 232 aaPredicted RBP17.17■□□□□ 0.34
SKA2-205ENST00000580541 GNAT2P19087 354 aa17.17■□□□□ 0.34
SKA2-205ENST00000580541 CHMLP26374 656 aa17.17■□□□□ 0.34
SKA2-205ENST00000580541 DIXDC1Q155Q3 683 aa17.17■□□□□ 0.34
SKA2-205ENST00000580541 ZMYM1Q5SVZ6 1142 aa17.17■□□□□ 0.34
SKA2-205ENST00000580541 USP50Q70EL3 339 aaPredicted RBP17.17■□□□□ 0.34
SKA2-205ENST00000580541 RBM26Q5T8P6 1007 aaKnown RBP17.16■□□□□ 0.34
SKA2-205ENST00000580541 CWC27Q6UX04 472 aaKnown RBP17.16■□□□□ 0.34
SKA2-205ENST00000580541 DDRGK1Q96HY6 314 aa17.16■□□□□ 0.34
SKA2-205ENST00000580541 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
SKA2-205ENST00000580541 MYO5AQ9Y4I1 1855 aaKnown RBP17.16■□□□□ 0.34
SKA2-205ENST00000580541 SPDYE2BA6NHP3 402 aa17.15■□□□□ 0.34
SKA2-205ENST00000580541 SPDYE6P0CI01 402 aa17.15■□□□□ 0.34
SKA2-205ENST00000580541 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms