RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 MKRN3Q13064 507 aaKnown RBP29.56■■■□□ 2.32
CDKN2A-214ENST00000579755 RASA3Q14644 834 aa29.56■■■□□ 2.32
CDKN2A-214ENST00000579755 SLC10A4Q96EP9 437 aa29.56■■■□□ 2.32
CDKN2A-214ENST00000579755 CASP8AP2Q9UKL3 1982 aa29.55■■■□□ 2.32
CDKN2A-214ENST00000579755 ATG9AQ7Z3C6 839 aa29.55■■■□□ 2.32
CDKN2A-214ENST00000579755 SPDYE2Q495Y8 402 aa29.54■■■□□ 2.32
CDKN2A-214ENST00000579755 TEKT1Q969V4 418 aa29.54■■■□□ 2.32
CDKN2A-214ENST00000579755 FZD1Q9UP38 647 aa29.54■■■□□ 2.32
CDKN2A-214ENST00000579755 IL15P40933 162 aaPredicted RBP29.53■■■□□ 2.32
CDKN2A-214ENST00000579755 TNNI2P48788 182 aa29.53■■■□□ 2.32
CDKN2A-214ENST00000579755 HDLBPQ00341 1268 aaKnown RBP29.53■■■□□ 2.32
CDKN2A-214ENST00000579755 ATP2B3Q16720 1220 aa29.53■■■□□ 2.32
CDKN2A-214ENST00000579755 LDLRAD1Q5T700 205 aa29.53■■■□□ 2.32
CDKN2A-214ENST00000579755 NBPF12Q5TAG4 269 aaPredicted RBP29.53■■■□□ 2.32
CDKN2A-214ENST00000579755 GNL3LQ9NVN8 582 aaKnown RBP29.53■■■□□ 2.32
CDKN2A-214ENST00000579755 MAST3O60307 1309 aa29.52■■■□□ 2.32
CDKN2A-214ENST00000579755 AOX1Q06278 1338 aa29.52■■■□□ 2.32
CDKN2A-214ENST00000579755 BCAR3O75815 825 aa29.52■■■□□ 2.32
CDKN2A-214ENST00000579755 IREB2P48200 963 aaKnown RBP29.52■■■□□ 2.32
CDKN2A-214ENST00000579755 SREBF2Q12772 1141 aa29.52■■■□□ 2.32
CDKN2A-214ENST00000579755 DGKZQ13574 1117 aa29.52■■■□□ 2.32
CDKN2A-214ENST00000579755 ATF7IPQ6VMQ6 1270 aa29.52■■■□□ 2.32
CDKN2A-214ENST00000579755 SUGT1Q9Y2Z0 365 aa29.52■■■□□ 2.32
CDKN2A-214ENST00000579755 TCP10L2B9ZVM9 353 aa29.51■■■□□ 2.31
CDKN2A-214ENST00000579755 GRIK5Q16478 980 aa29.51■■■□□ 2.31
CDKN2A-214ENST00000579755 WDR66Q8TBY9 1149 aa29.51■■■□□ 2.31
CDKN2A-214ENST00000579755 PA2G4Q9UQ80 394 aaKnown RBP29.51■■■□□ 2.31
CDKN2A-214ENST00000579755 TRIM27P14373 513 aa29.5■■■□□ 2.31
CDKN2A-214ENST00000579755 MAP3K11Q16584 847 aa29.5■■■□□ 2.31
CDKN2A-214ENST00000579755 CLUAP1Q96AJ1 413 aa29.5■■■□□ 2.31
CDKN2A-214ENST00000579755 TMOD2Q9NZR1 351 aa29.5■■■□□ 2.31
CDKN2A-214ENST00000579755 ARAP2Q8WZ64 1704 aa29.5■■■□□ 2.31
CDKN2A-214ENST00000579755 SRGAP3O43295 1099 aa29.49■■■□□ 2.31
CDKN2A-214ENST00000579755 TM4SF4P48230 202 aa29.49■■■□□ 2.31
CDKN2A-214ENST00000579755 MRIQ9BWK5 157 aa29.49■■■□□ 2.31
CDKN2A-214ENST00000579755 MCOLN1Q9GZU1 580 aa29.49■■■□□ 2.31
CDKN2A-214ENST00000579755 COPRSQ9NQ92 184 aa29.49■■■□□ 2.31
CDKN2A-214ENST00000579755 UNCXA6NJT0 531 aa29.48■■■□□ 2.31
CDKN2A-214ENST00000579755 CCDC85CA6NKD9 419 aa29.48■■■□□ 2.31
CDKN2A-214ENST00000579755 SPRYD7Q5W111 196 aa29.48■■■□□ 2.31
CDKN2A-214ENST00000579755 ZKSCAN2Q63HK3 967 aa29.47■■■□□ 2.31
CDKN2A-214ENST00000579755 ZDHHC15Q96MV8 337 aa29.46■■■□□ 2.31
CDKN2A-214ENST00000579755 USP2O75604 605 aaPredicted RBP29.45■■■□□ 2.31
CDKN2A-214ENST00000579755 GNAI2P04899 355 aa29.45■■■□□ 2.31
CDKN2A-214ENST00000579755 ANKRD13AQ8IZ07 590 aa29.45■■■□□ 2.31
CDKN2A-214ENST00000579755 CLMNQ96JQ2 1002 aa29.45■■■□□ 2.31
CDKN2A-214ENST00000579755 MANSC4A6NHS7 340 aaPredicted RBP29.44■■■□□ 2.3
CDKN2A-214ENST00000579755 TBC1D8O95759 1140 aa29.44■■■□□ 2.3
CDKN2A-214ENST00000579755 INHBEP58166 350 aa29.44■■■□□ 2.3
CDKN2A-214ENST00000579755 HHIPL2Q6UWX4 724 aa29.44■■■□□ 2.3
CDKN2A-214ENST00000579755 TMEM39BQ9GZU3 492 aa29.44■■■□□ 2.3
CDKN2A-214ENST00000579755 DENND2AQ9ULE3 1009 aa29.44■■■□□ 2.3
CDKN2A-214ENST00000579755 AKAP2Q9Y2D5 859 aa29.44■■■□□ 2.3
CDKN2A-214ENST00000579755 SSC5DA1L4H1 1573 aa29.43■■■□□ 2.3
CDKN2A-214ENST00000579755 ZBTB48P10074 688 aaPredicted RBP29.43■■■□□ 2.3
CDKN2A-214ENST00000579755 TNNQ9UQP3 1299 aa29.43■■■□□ 2.3
CDKN2A-214ENST00000579755 MYH13Q9UKX3 1938 aa29.43■■■□□ 2.3
CDKN2A-214ENST00000579755 WNK4Q96J92 1243 aa29.42■■■□□ 2.3
CDKN2A-214ENST00000579755 SEMA3EO15041 775 aa29.41■■■□□ 2.3
CDKN2A-214ENST00000579755 ALDH1A1P00352 501 aa29.41■■■□□ 2.3
CDKN2A-214ENST00000579755 LDHBP07195 334 aaKnown RBP29.41■■■□□ 2.3
CDKN2A-214ENST00000579755 CACNB3P54284 484 aa29.41■■■□□ 2.3
CDKN2A-214ENST00000579755 MTX1Q13505 466 aa29.41■■■□□ 2.3
CDKN2A-214ENST00000579755 PHKA1P46020 1223 aa29.4■■■□□ 2.3
CDKN2A-214ENST00000579755 TIMM10P62072 90 aa29.4■■■□□ 2.3
CDKN2A-214ENST00000579755 APOBEC3HQ6NTF7 200 aaKnown RBP29.4■■■□□ 2.3
CDKN2A-214ENST00000579755 TEPSINQ96N21 525 aa29.4■■■□□ 2.3
CDKN2A-214ENST00000579755 TFCP2Q12800 502 aa29.39■■■□□ 2.3
CDKN2A-214ENST00000579755 FTSJ3Q8IY81 847 aaKnown RBP29.39■■■□□ 2.3
CDKN2A-214ENST00000579755 TMEM57Q8N5G2 664 aa29.39■■■□□ 2.3
CDKN2A-214ENST00000579755 HOOK2Q96ED9 719 aa29.39■■■□□ 2.3
CDKN2A-214ENST00000579755 ADORA1P30542 326 aa29.38■■■□□ 2.29
CDKN2A-214ENST00000579755 G3BP1Q13283 466 aaKnown RBP eCLIP29.38■■■□□ 2.29
CDKN2A-214ENST00000579755 CCDC102BQ68D86 513 aa29.38■■■□□ 2.29
CDKN2A-214ENST00000579755 ZGPATQ8N5A5 531 aaKnown RBP29.38■■■□□ 2.29
CDKN2A-214ENST00000579755 NEUROD6Q96NK8 337 aa29.38■■■□□ 2.29
CDKN2A-214ENST00000579755 MAP3K9P80192 1104 aa29.37■■■□□ 2.29
CDKN2A-214ENST00000579755 FKBP1CQ5VVH2 108 aa29.37■■■□□ 2.29
CDKN2A-214ENST00000579755 OTUD7BQ6GQQ9 843 aa29.37■■■□□ 2.29
CDKN2A-214ENST00000579755 CTU1Q7Z7A3 348 aaKnown RBP29.37■■■□□ 2.29
CDKN2A-214ENST00000579755 FAM83AQ86UY5 434 aa29.37■■■□□ 2.29
CDKN2A-214ENST00000579755 ELP3Q9H9T3 547 aa29.37■■■□□ 2.29
CDKN2A-214ENST00000579755 CSADQ9Y600 493 aa29.37■■■□□ 2.29
CDKN2A-214ENST00000579755 A0A1B0GUL7 405 aa29.36■■■□□ 2.29
CDKN2A-214ENST00000579755 PRDX5P30044 214 aa29.36■■■□□ 2.29
CDKN2A-214ENST00000579755 MVPQ14764 893 aaKnown RBP29.36■■■□□ 2.29
CDKN2A-214ENST00000579755 GORABQ5T7V8 394 aa29.36■■■□□ 2.29
CDKN2A-214ENST00000579755 IFNL1Q8IU54 200 aa29.36■■■□□ 2.29
CDKN2A-214ENST00000579755 CDAN1Q8IWY9 1227 aa29.36■■■□□ 2.29
CDKN2A-214ENST00000579755 ZNF296Q8WUU4 475 aaPredicted RBP29.36■■■□□ 2.29
CDKN2A-214ENST00000579755 GPR25O00155 361 aa29.35■■■□□ 2.29
CDKN2A-214ENST00000579755 DIXDC1Q155Q3 683 aa29.35■■■□□ 2.29
CDKN2A-214ENST00000579755 XAGE2Q96GT9 111 aa29.35■■■□□ 2.29
CDKN2A-214ENST00000579755 SALL1Q9NSC2 1324 aa29.35■■■□□ 2.29
CDKN2A-214ENST00000579755 OPTNQ96CV9 577 aa29.34■■■□□ 2.29
CDKN2A-214ENST00000579755 DAGLAQ9Y4D2 1042 aa29.34■■■□□ 2.29
CDKN2A-214ENST00000579755 ABCF2Q9UG63 623 aa29.33■■■□□ 2.29
CDKN2A-214ENST00000579755 PNMA6EA0A0J9YXQ4 647 aa29.32■■■□□ 2.28
CDKN2A-214ENST00000579755 NOM1Q5C9Z4 860 aaKnown RBP29.32■■■□□ 2.28
CDKN2A-214ENST00000579755 DCAF15Q66K64 600 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms