RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 ZNF589Q86UQ0 364 aaPredicted RBP16.7■□□□□ 0.26
TSEN54-206ENST00000579449 NIM1KQ8IY84 436 aa16.7■□□□□ 0.26
TSEN54-206ENST00000579449 TSHZ2Q9NRE2 1034 aa16.7■□□□□ 0.26
TSEN54-206ENST00000579449 MYH2Q9UKX2 1941 aa16.7■□□□□ 0.26
TSEN54-206ENST00000579449 MAST3O60307 1309 aa16.7■□□□□ 0.26
TSEN54-206ENST00000579449 USP17L3A6NCW0 530 aa16.69■□□□□ 0.26
TSEN54-206ENST00000579449 USP17L4A6NCW7 530 aa16.69■□□□□ 0.26
TSEN54-206ENST00000579449 M0R2C6 588 aa16.69■□□□□ 0.26
TSEN54-206ENST00000579449 CYP7A1P22680 504 aa16.69■□□□□ 0.26
TSEN54-206ENST00000579449 MECOMQ03112 1051 aa16.69■□□□□ 0.26
TSEN54-206ENST00000579449 STRIP1Q5VSL9 837 aa16.69■□□□□ 0.26
TSEN54-206ENST00000579449 NAA16Q6N069 864 aaPredicted RBP16.69■□□□□ 0.26
TSEN54-206ENST00000579449 USP17L1Q7RTZ2 530 aa16.69■□□□□ 0.26
TSEN54-206ENST00000579449 ZNF384Q8TF68 577 aa16.69■□□□□ 0.26
TSEN54-206ENST00000579449 NSUN4Q96CB9 384 aaKnown RBP16.69■□□□□ 0.26
TSEN54-206ENST00000579449 PUS7LQ9H0K6 701 aaKnown RBP16.69■□□□□ 0.26
TSEN54-206ENST00000579449 UPF2Q9HAU5 1272 aaKnown RBP16.69■□□□□ 0.26
TSEN54-206ENST00000579449 ANO2Q9NQ90 1003 aa16.69■□□□□ 0.26
TSEN54-206ENST00000579449 SBF1O95248 1867 aa16.69■□□□□ 0.26
TSEN54-206ENST00000579449 IGSF3O75054 1194 aa16.68■□□□□ 0.26
TSEN54-206ENST00000579449 YBX3P16989 372 aaKnown RBP eCLIP16.68■□□□□ 0.26
TSEN54-206ENST00000579449 PRELPP51888 382 aa16.68■□□□□ 0.26
TSEN54-206ENST00000579449 FKBP1AP62942 108 aaKnown RBP16.68■□□□□ 0.26
TSEN54-206ENST00000579449 KIAA1211Q6ZU35 1233 aa16.68■□□□□ 0.26
TSEN54-206ENST00000579449 DZIP1Q86YF9 867 aaKnown RBP16.68■□□□□ 0.26
TSEN54-206ENST00000579449 CERS5Q8N5B7 392 aa16.68■□□□□ 0.26
TSEN54-206ENST00000579449 MXD3Q9BW11 206 aa16.68■□□□□ 0.26
TSEN54-206ENST00000579449 USP26Q9BXU7 913 aa16.68■□□□□ 0.26
TSEN54-206ENST00000579449 DICER1Q9UPY3 1922 aaKnown RBP16.68■□□□□ 0.26
TSEN54-206ENST00000579449 CCDC171Q6TFL3 1326 aa16.68■□□□□ 0.26
TSEN54-206ENST00000579449 GOLGB1Q14789 3259 aaKnown RBP16.67■□□□□ 0.26
TSEN54-206ENST00000579449 DACT2Q5SW24 774 aa16.67■□□□□ 0.26
TSEN54-206ENST00000579449 LSG1Q9H089 658 aaKnown RBP16.67■□□□□ 0.26
TSEN54-206ENST00000579449 ZNRF3Q9ULT6 936 aa16.67■□□□□ 0.26
TSEN54-206ENST00000579449 SUGT1Q9Y2Z0 365 aa16.67■□□□□ 0.26
TSEN54-206ENST00000579449 RAD17O75943 681 aa16.66■□□□□ 0.26
TSEN54-206ENST00000579449 PTH1RQ03431 593 aa16.66■□□□□ 0.26
TSEN54-206ENST00000579449 TMED8Q6PL24 325 aaPredicted RBP16.66■□□□□ 0.26
TSEN54-206ENST00000579449 ADGRA1Q86SQ6 560 aa16.66■□□□□ 0.26
TSEN54-206ENST00000579449 JDP2Q8WYK2 163 aa16.66■□□□□ 0.26
TSEN54-206ENST00000579449 GPAA1O43292 621 aa16.65■□□□□ 0.26
TSEN54-206ENST00000579449 GSTO1P78417 241 aa16.65■□□□□ 0.26
TSEN54-206ENST00000579449 MIGA1Q8NAN2 632 aa16.65■□□□□ 0.26
TSEN54-206ENST00000579449 AIDAQ96BJ3 306 aa16.65■□□□□ 0.26
TSEN54-206ENST00000579449 C22orf23Q9BZE7 217 aa16.65■□□□□ 0.26
TSEN54-206ENST00000579449 MAGEB6P1A0A0J9YX57 407 aa16.64■□□□□ 0.25
TSEN54-206ENST00000579449 F8W031 263 aaPredicted RBP16.64■□□□□ 0.25
TSEN54-206ENST00000579449 PSMD14O00487 310 aa16.64■□□□□ 0.25
TSEN54-206ENST00000579449 EPB41L2O43491 1005 aaKnown RBP16.64■□□□□ 0.25
TSEN54-206ENST00000579449 MBD4O95243 580 aa16.64■□□□□ 0.25
TSEN54-206ENST00000579449 LDHCP07864 332 aa16.64■□□□□ 0.25
TSEN54-206ENST00000579449 VIL1P09327 827 aaKnown RBP16.64■□□□□ 0.25
TSEN54-206ENST00000579449 MAPK8IP2Q13387 824 aaPredicted RBP16.64■□□□□ 0.25
TSEN54-206ENST00000579449 DIXDC1Q155Q3 683 aa16.64■□□□□ 0.25
TSEN54-206ENST00000579449 TBC1D32Q96NH3 1257 aa16.64■□□□□ 0.25
TSEN54-206ENST00000579449 LMNB1P20700 586 aa16.63■□□□□ 0.25
TSEN54-206ENST00000579449 DYNLL1P63167 89 aaKnown RBP16.63■□□□□ 0.25
TSEN54-206ENST00000579449 CXCL9Q07325 125 aa16.63■□□□□ 0.25
TSEN54-206ENST00000579449 VPS53Q5VIR6 699 aa16.63■□□□□ 0.25
TSEN54-206ENST00000579449 RSBN1LQ6PCB5 846 aaPredicted RBP16.63■□□□□ 0.25
TSEN54-206ENST00000579449 SLF2Q8IX21 1173 aa16.63■□□□□ 0.25
TSEN54-206ENST00000579449 MAP4K1Q92918 833 aa16.63■□□□□ 0.25
TSEN54-206ENST00000579449 STRBPQ96SI9 672 aaKnown RBP16.63■□□□□ 0.25
TSEN54-206ENST00000579449 ARMT1Q9H993 441 aa16.63■□□□□ 0.25
TSEN54-206ENST00000579449 TTF2Q9UNY4 1162 aaKnown RBP16.63■□□□□ 0.25
TSEN54-206ENST00000579449 MROH7-TTC4A0A0A0MT08 1334 aa16.63■□□□□ 0.25
TSEN54-206ENST00000579449 HSPD1P10809 573 aaKnown RBP16.62■□□□□ 0.25
TSEN54-206ENST00000579449 GPR162Q16538 588 aa16.62■□□□□ 0.25
TSEN54-206ENST00000579449 CIAPIN1Q6FI81 312 aa16.62■□□□□ 0.25
TSEN54-206ENST00000579449 KIAA0825Q8IV33 1275 aa16.62■□□□□ 0.25
TSEN54-206ENST00000579449 LCORLQ8N3X6 602 aa16.62■□□□□ 0.25
TSEN54-206ENST00000579449 FAM163AQ96GL9 167 aaPredicted RBP16.62■□□□□ 0.25
TSEN54-206ENST00000579449 RIOK1Q9BRS2 568 aaKnown RBP16.62■□□□□ 0.25
TSEN54-206ENST00000579449 DSCC1Q9BVC3 393 aa16.62■□□□□ 0.25
TSEN54-206ENST00000579449 ADAMTSL1Q8N6G6 1762 aa16.61■□□□□ 0.25
TSEN54-206ENST00000579449 FZD9O00144 591 aa16.61■□□□□ 0.25
TSEN54-206ENST00000579449 RBM25P49756 843 aaKnown RBP16.61■□□□□ 0.25
TSEN54-206ENST00000579449 SCNN1DP51172 638 aa16.61■□□□□ 0.25
TSEN54-206ENST00000579449 AATFQ9NY61 560 aaKnown RBP eCLIP16.61■□□□□ 0.25
TSEN54-206ENST00000579449 RBM8AQ9Y5S9 174 aaKnown RBP16.61■□□□□ 0.25
TSEN54-206ENST00000579449 GAKO14976 1311 aa16.61■□□□□ 0.25
TSEN54-206ENST00000579449 MYO3BQ8WXR4 1341 aa16.61■□□□□ 0.25
TSEN54-206ENST00000579449 FOXP2O15409 715 aa16.6■□□□□ 0.25
TSEN54-206ENST00000579449 MCCP23508 829 aa16.6■□□□□ 0.25
TSEN54-206ENST00000579449 EIF6P56537 245 aaKnown RBP16.6■□□□□ 0.25
TSEN54-206ENST00000579449 TNIP1Q15025 636 aa16.6■□□□□ 0.25
TSEN54-206ENST00000579449 GMLQ99445 158 aa16.6■□□□□ 0.25
TSEN54-206ENST00000579449 NOL10Q9BSC4 688 aaKnown RBP16.6■□□□□ 0.25
TSEN54-206ENST00000579449 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
TSEN54-206ENST00000579449 DAGLAQ9Y4D2 1042 aa16.6■□□□□ 0.25
TSEN54-206ENST00000579449 CDK5RAP2Q96SN8 1893 aa16.59■□□□□ 0.25
TSEN54-206ENST00000579449 GPR75-ASB3A0A0A6YYF3 556 aa16.59■□□□□ 0.25
TSEN54-206ENST00000579449 PATL2C9JE40 543 aaKnown RBP16.59■□□□□ 0.25
TSEN54-206ENST00000579449 PRKAB2O43741 272 aa16.59■□□□□ 0.25
TSEN54-206ENST00000579449 BAG3O95817 575 aa16.59■□□□□ 0.25
TSEN54-206ENST00000579449 GNAT2P19087 354 aa16.59■□□□□ 0.25
TSEN54-206ENST00000579449 HSPA4P34932 840 aa16.59■□□□□ 0.25
TSEN54-206ENST00000579449 BTDP43251 543 aa16.59■□□□□ 0.25
TSEN54-206ENST00000579449 PPP4CP60510 307 aa16.59■□□□□ 0.25
TSEN54-206ENST00000579449 HHIPL2Q6UWX4 724 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms