RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 GRIK5Q16478 980 aa18.36■□□□□ 0.53
SS18-212ENST00000579061 SPDYE2Q495Y8 402 aa18.36■□□□□ 0.53
SS18-212ENST00000579061 PDS5AQ29RF7 1337 aaKnown RBP18.35■□□□□ 0.53
SS18-212ENST00000579061 SALL1Q9NSC2 1324 aa18.35■□□□□ 0.53
SS18-212ENST00000579061 FOXN1O15353 648 aa18.35■□□□□ 0.53
SS18-212ENST00000579061 AOC2O75106 756 aa18.35■□□□□ 0.53
SS18-212ENST00000579061 ADORA1P30542 326 aa18.35■□□□□ 0.53
SS18-212ENST00000579061 ZNF157P51786 506 aaPredicted RBP18.35■□□□□ 0.53
SS18-212ENST00000579061 TNFAIP1Q13829 316 aa18.35■□□□□ 0.53
SS18-212ENST00000579061 MVPQ14764 893 aaKnown RBP18.35■□□□□ 0.53
SS18-212ENST00000579061 PRAMEF18Q5VWM3 479 aa18.35■□□□□ 0.53
SS18-212ENST00000579061 CCDC102BQ68D86 513 aa18.35■□□□□ 0.53
SS18-212ENST00000579061 TEKT1Q969V4 418 aa18.35■□□□□ 0.53
SS18-212ENST00000579061 ZNF70Q9UC06 446 aaPredicted RBP18.35■□□□□ 0.53
SS18-212ENST00000579061 CLRN2A0PK11 232 aa18.34■□□□□ 0.53
SS18-212ENST00000579061 FAM155AB1AL88 458 aaPredicted RBP18.34■□□□□ 0.53
SS18-212ENST00000579061 CTCFP49711 727 aaPredicted RBP18.34■□□□□ 0.53
SS18-212ENST00000579061 HHIPL2Q6UWX4 724 aa18.34■□□□□ 0.53
SS18-212ENST00000579061 XAGE2Q96GT9 111 aa18.34■□□□□ 0.53
SS18-212ENST00000579061 ZDHHC15Q96MV8 337 aa18.34■□□□□ 0.53
SS18-212ENST00000579061 C1orf115Q9H7X2 142 aa18.34■□□□□ 0.53
SS18-212ENST00000579061 VEZTQ9HBM0 779 aa18.34■□□□□ 0.53
SS18-212ENST00000579061 GPR108Q9NPR9 543 aa18.34■□□□□ 0.53
SS18-212ENST00000579061 NOP58Q9Y2X3 529 aaKnown RBP18.34■□□□□ 0.53
SS18-212ENST00000579061 AOX1Q06278 1338 aa18.33■□□□□ 0.53
SS18-212ENST00000579061 SLC10A3P09131 477 aa18.33■□□□□ 0.52
SS18-212ENST00000579061 ARMC9Q7Z3E5 817 aa18.33■□□□□ 0.52
SS18-212ENST00000579061 ZGPATQ8N5A5 531 aaKnown RBP18.33■□□□□ 0.52
SS18-212ENST00000579061 BEGAINQ9BUH8 593 aa18.33■□□□□ 0.52
SS18-212ENST00000579061 CHMP4BQ9H444 224 aaKnown RBP18.33■□□□□ 0.52
SS18-212ENST00000579061 TDRD3Q9H7E2 651 aaKnown RBP18.33■□□□□ 0.52
SS18-212ENST00000579061 DDX19BQ9UMR2 479 aa18.33■□□□□ 0.52
SS18-212ENST00000579061 CA12O43570 354 aa18.32■□□□□ 0.52
SS18-212ENST00000579061 TTLL12Q14166 644 aaPredicted RBP18.32■□□□□ 0.52
SS18-212ENST00000579061 SUPT20HL1Q3ZLR7 823 aa18.32■□□□□ 0.52
SS18-212ENST00000579061 CEP85Q6P2H3 762 aa18.32■□□□□ 0.52
SS18-212ENST00000579061 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.32■□□□□ 0.52
SS18-212ENST00000579061 NEUROD6Q96NK8 337 aa18.32■□□□□ 0.52
SS18-212ENST00000579061 PRDM10Q9NQV6 1147 aa18.32■□□□□ 0.52
SS18-212ENST00000579061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.32■□□□□ 0.52
SS18-212ENST00000579061 SURF6O75683 361 aaKnown RBP18.31■□□□□ 0.52
SS18-212ENST00000579061 LDHBP07195 334 aaKnown RBP18.31■□□□□ 0.52
SS18-212ENST00000579061 TNNI2P48788 182 aa18.31■□□□□ 0.52
SS18-212ENST00000579061 PDE3AQ14432 1141 aa18.31■□□□□ 0.52
SS18-212ENST00000579061 RASA3Q14644 834 aa18.31■□□□□ 0.52
SS18-212ENST00000579061 MAP3K11Q16584 847 aa18.31■□□□□ 0.52
SS18-212ENST00000579061 AKAP11Q9UKA4 1901 aa18.3■□□□□ 0.52
SS18-212ENST00000579061 MYH2Q9UKX2 1941 aa18.3■□□□□ 0.52
SS18-212ENST00000579061 UNCXA6NJT0 531 aa18.3■□□□□ 0.52
SS18-212ENST00000579061 UBE2Q2LH0YL09 131 aa18.3■□□□□ 0.52
SS18-212ENST00000579061 PRDX5P30044 214 aa18.3■□□□□ 0.52
SS18-212ENST00000579061 OS9Q13438 667 aaPredicted RBP18.3■□□□□ 0.52
SS18-212ENST00000579061 RASGRF1Q13972 1273 aa18.3■□□□□ 0.52
SS18-212ENST00000579061 FKBP1CQ5VVH2 108 aa18.3■□□□□ 0.52
SS18-212ENST00000579061 APOBEC3HQ6NTF7 200 aaKnown RBP18.3■□□□□ 0.52
SS18-212ENST00000579061 MOB2Q70IA6 237 aa18.3■□□□□ 0.52
SS18-212ENST00000579061 RASAL3Q86YV0 1011 aa18.3■□□□□ 0.52
SS18-212ENST00000579061 REM2Q8IYK8 340 aaPredicted RBP18.3■□□□□ 0.52
SS18-212ENST00000579061 PPP1R12BO60237 982 aaPredicted RBP18.29■□□□□ 0.52
SS18-212ENST00000579061 ARID4AP29374 1257 aaPredicted RBP18.29■□□□□ 0.52
SS18-212ENST00000579061 LDLRAD1Q5T700 205 aa18.29■□□□□ 0.52
SS18-212ENST00000579061 GORABQ5T7V8 394 aa18.29■□□□□ 0.52
SS18-212ENST00000579061 COL13A1Q5TAT6 717 aaPredicted RBP18.29■□□□□ 0.52
SS18-212ENST00000579061 ZIC5Q96T25 663 aa18.29■□□□□ 0.52
SS18-212ENST00000579061 TMOD2Q9NZR1 351 aa18.29■□□□□ 0.52
SS18-212ENST00000579061 COG6Q9Y2V7 657 aa18.29■□□□□ 0.52
SS18-212ENST00000579061 SSC5DA1L4H1 1573 aa18.29■□□□□ 0.52
SS18-212ENST00000579061 HSPA8P11142 646 aaKnown RBP18.28■□□□□ 0.52
SS18-212ENST00000579061 KIF23Q02241 960 aaPredicted RBP18.28■□□□□ 0.52
SS18-212ENST00000579061 TNNI3KQ59H18 835 aa18.28■□□□□ 0.52
SS18-212ENST00000579061 NBPF12Q5TAG4 269 aaPredicted RBP18.28■□□□□ 0.52
SS18-212ENST00000579061 SPTY2D1Q68D10 685 aaPredicted RBP18.28■□□□□ 0.52
SS18-212ENST00000579061 FAM83AQ86UY5 434 aa18.28■□□□□ 0.52
SS18-212ENST00000579061 RPAP2Q8IXW5 612 aaPredicted RBP18.28■□□□□ 0.52
SS18-212ENST00000579061 ZBTB40Q9NUA8 1239 aa18.28■□□□□ 0.52
SS18-212ENST00000579061 ANGEL1Q9UNK9 670 aaKnown RBP18.28■□□□□ 0.52
SS18-212ENST00000579061 FPGT-TNNI3KV9GXZ4 949 aa18.28■□□□□ 0.52
SS18-212ENST00000579061 TCP10L2B9ZVM9 353 aa18.27■□□□□ 0.52
SS18-212ENST00000579061 UQCRFS1P1P0C7P4 283 aa18.27■□□□□ 0.52
SS18-212ENST00000579061 TEPSINQ96N21 525 aa18.27■□□□□ 0.52
SS18-212ENST00000579061 DAGLAQ9Y4D2 1042 aa18.27■□□□□ 0.52
SS18-212ENST00000579061 LBX1P52954 281 aa18.26■□□□□ 0.51
SS18-212ENST00000579061 PRKG1Q13976 671 aa18.26■□□□□ 0.51
SS18-212ENST00000579061 DIXDC1Q155Q3 683 aa18.26■□□□□ 0.51
SS18-212ENST00000579061 HSP90AB4PQ58FF6 505 aa18.26■□□□□ 0.51
SS18-212ENST00000579061 ERC1Q8IUD2 1116 aa18.26■□□□□ 0.51
SS18-212ENST00000579061 SLF2Q8IX21 1173 aa18.26■□□□□ 0.51
SS18-212ENST00000579061 HMG20BQ9P0W2 317 aa18.26■□□□□ 0.51
SS18-212ENST00000579061 HMMRO75330 724 aa18.25■□□□□ 0.51
SS18-212ENST00000579061 USP2O75604 605 aaPredicted RBP18.25■□□□□ 0.51
SS18-212ENST00000579061 IREB2P48200 963 aaKnown RBP18.25■□□□□ 0.51
SS18-212ENST00000579061 CCDC158Q5M9N0 1113 aa18.25■□□□□ 0.51
SS18-212ENST00000579061 SPATA5Q8NB90 893 aa18.25■□□□□ 0.51
SS18-212ENST00000579061 FAM163AQ96GL9 167 aaPredicted RBP18.25■□□□□ 0.51
SS18-212ENST00000579061 ZNF512BQ96KM6 892 aaPredicted RBP18.25■□□□□ 0.51
SS18-212ENST00000579061 CSRNP1Q96S65 589 aa18.25■□□□□ 0.51
SS18-212ENST00000579061 RPAP1Q9BWH6 1393 aaPredicted RBP18.25■□□□□ 0.51
SS18-212ENST00000579061 GAKO14976 1311 aa18.24■□□□□ 0.51
SS18-212ENST00000579061 ERICH6Q7L0X2 663 aa18.24■□□□□ 0.51
SS18-212ENST00000579061 DZIP1Q86YF9 867 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms