RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 AOX1Q06278 1338 aa14.4□□□□□ -0.1
SSH2-208ENST00000579040 IPO8O15397 1037 aaKnown RBP14.39□□□□□ -0.11
SSH2-208ENST00000579040 GNAI3P08754 354 aa14.39□□□□□ -0.11
SSH2-208ENST00000579040 TM4SF4P48230 202 aa14.39□□□□□ -0.11
SSH2-208ENST00000579040 SREBF2Q12772 1141 aa14.39□□□□□ -0.11
SSH2-208ENST00000579040 RASA3Q14644 834 aa14.39□□□□□ -0.11
SSH2-208ENST00000579040 MRIQ9BWK5 157 aa14.39□□□□□ -0.11
SSH2-208ENST00000579040 MCOLN1Q9GZU1 580 aa14.39□□□□□ -0.11
SSH2-208ENST00000579040 LRRFIP2Q9Y608 721 aaKnown RBP14.39□□□□□ -0.11
SSH2-208ENST00000579040 IREB2P48200 963 aaKnown RBP14.38□□□□□ -0.11
SSH2-208ENST00000579040 TNNI2P48788 182 aa14.38□□□□□ -0.11
SSH2-208ENST00000579040 DGKZQ13574 1117 aa14.38□□□□□ -0.11
SSH2-208ENST00000579040 SPRYD7Q5W111 196 aa14.38□□□□□ -0.11
SSH2-208ENST00000579040 TEKT1Q969V4 418 aa14.38□□□□□ -0.11
SSH2-208ENST00000579040 SLC10A4Q96EP9 437 aa14.38□□□□□ -0.11
SSH2-208ENST00000579040 MEIS3Q99687 375 aa14.38□□□□□ -0.11
SSH2-208ENST00000579040 TDRD3Q9H7E2 651 aaKnown RBP14.38□□□□□ -0.11
SSH2-208ENST00000579040 CEP126Q9P2H0 1117 aa14.38□□□□□ -0.11
SSH2-208ENST00000579040 ZBTB48P10074 688 aaPredicted RBP14.37□□□□□ -0.11
SSH2-208ENST00000579040 IL15P40933 162 aaPredicted RBP14.37□□□□□ -0.11
SSH2-208ENST00000579040 GRIK5Q16478 980 aa14.37□□□□□ -0.11
SSH2-208ENST00000579040 ATP2B3Q16720 1220 aa14.37□□□□□ -0.11
SSH2-208ENST00000579040 NOM1Q5C9Z4 860 aaKnown RBP14.37□□□□□ -0.11
SSH2-208ENST00000579040 NBPF12Q5TAG4 269 aaPredicted RBP14.37□□□□□ -0.11
SSH2-208ENST00000579040 WDR66Q8TBY9 1149 aa14.37□□□□□ -0.11
SSH2-208ENST00000579040 ZDHHC15Q96MV8 337 aa14.37□□□□□ -0.11
SSH2-208ENST00000579040 SIL1Q9H173 461 aa14.37□□□□□ -0.11
SSH2-208ENST00000579040 COPRSQ9NQ92 184 aa14.37□□□□□ -0.11
SSH2-208ENST00000579040 MANSC4A6NHS7 340 aaPredicted RBP14.36□□□□□ -0.11
SSH2-208ENST00000579040 ZBTB22O15209 634 aa14.36□□□□□ -0.11
SSH2-208ENST00000579040 INHBEP58166 350 aa14.36□□□□□ -0.11
SSH2-208ENST00000579040 MTX1Q13505 466 aa14.36□□□□□ -0.11
SSH2-208ENST00000579040 ATF7IPQ6VMQ6 1270 aa14.36□□□□□ -0.11
SSH2-208ENST00000579040 CFHR5Q9BXR6 569 aa14.36□□□□□ -0.11
SSH2-208ENST00000579040 GNL3LQ9NVN8 582 aaKnown RBP14.36□□□□□ -0.11
SSH2-208ENST00000579040 FZD1Q9UP38 647 aa14.36□□□□□ -0.11
SSH2-208ENST00000579040 SEMA3EO15041 775 aa14.35□□□□□ -0.11
SSH2-208ENST00000579040 USP2O75604 605 aaPredicted RBP14.35□□□□□ -0.11
SSH2-208ENST00000579040 ALDH1A1P00352 501 aa14.35□□□□□ -0.11
SSH2-208ENST00000579040 TRIM27P14373 513 aa14.35□□□□□ -0.11
SSH2-208ENST00000579040 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
SSH2-208ENST00000579040 FKBP1CQ5VVH2 108 aa14.35□□□□□ -0.11
SSH2-208ENST00000579040 HHIPL2Q6UWX4 724 aa14.35□□□□□ -0.11
SSH2-208ENST00000579040 ANKRD13AQ8IZ07 590 aa14.35□□□□□ -0.11
SSH2-208ENST00000579040 WNK4Q96J92 1243 aa14.35□□□□□ -0.11
SSH2-208ENST00000579040 CLMNQ96JQ2 1002 aa14.35□□□□□ -0.11
SSH2-208ENST00000579040 TEPSINQ96N21 525 aa14.35□□□□□ -0.11
SSH2-208ENST00000579040 TMOD2Q9NZR1 351 aa14.35□□□□□ -0.11
SSH2-208ENST00000579040 AK9Q5TCS8 1911 aa14.35□□□□□ -0.11
SSH2-208ENST00000579040 MYH2Q9UKX2 1941 aa14.35□□□□□ -0.11
SSH2-208ENST00000579040 CCDC85CA6NKD9 419 aa14.34□□□□□ -0.11
SSH2-208ENST00000579040 TCP10L2B9ZVM9 353 aa14.34□□□□□ -0.11
SSH2-208ENST00000579040 DIEXFQ68CQ4 756 aaKnown RBP14.34□□□□□ -0.11
SSH2-208ENST00000579040 CTU1Q7Z7A3 348 aaKnown RBP14.34□□□□□ -0.11
SSH2-208ENST00000579040 FAM83AQ86UY5 434 aa14.34□□□□□ -0.11
SSH2-208ENST00000579040 MIER1Q8N108 512 aa14.34□□□□□ -0.11
SSH2-208ENST00000579040 PA2G4Q9UQ80 394 aaKnown RBP14.34□□□□□ -0.11
SSH2-208ENST00000579040 RPAP1Q9BWH6 1393 aaPredicted RBP14.34□□□□□ -0.11
SSH2-208ENST00000579040 SRGAP3O43295 1099 aa14.33□□□□□ -0.12
SSH2-208ENST00000579040 BCAR3O75815 825 aa14.33□□□□□ -0.12
SSH2-208ENST00000579040 HNRNPUQ00839 825 aaKnown RBP eCLIP14.33□□□□□ -0.12
SSH2-208ENST00000579040 APOBEC3HQ6NTF7 200 aaKnown RBP14.33□□□□□ -0.12
SSH2-208ENST00000579040 FRAT1Q92837 279 aaPredicted RBP14.33□□□□□ -0.12
SSH2-208ENST00000579040 HOOK2Q96ED9 719 aa14.33□□□□□ -0.12
SSH2-208ENST00000579040 TMEM39BQ9GZU3 492 aa14.33□□□□□ -0.12
SSH2-208ENST00000579040 DENND2AQ9ULE3 1009 aa14.33□□□□□ -0.12
SSH2-208ENST00000579040 SALL1Q9NSC2 1324 aa14.33□□□□□ -0.12
SSH2-208ENST00000579040 TBC1D8O95759 1140 aa14.32□□□□□ -0.12
SSH2-208ENST00000579040 ZKSCAN2Q63HK3 967 aa14.32□□□□□ -0.12
SSH2-208ENST00000579040 IFNL1Q8IU54 200 aa14.32□□□□□ -0.12
SSH2-208ENST00000579040 AKAP2Q9Y2D5 859 aa14.32□□□□□ -0.12
SSH2-208ENST00000579040 PDS5AQ29RF7 1337 aaKnown RBP14.32□□□□□ -0.12
SSH2-208ENST00000579040 GPR25O00155 361 aa14.31□□□□□ -0.12
SSH2-208ENST00000579040 GNAI2P04899 355 aa14.31□□□□□ -0.12
SSH2-208ENST00000579040 LDHBP07195 334 aaKnown RBP14.31□□□□□ -0.12
SSH2-208ENST00000579040 PHKA1P46020 1223 aa14.31□□□□□ -0.12
SSH2-208ENST00000579040 PKN2Q16513 984 aaKnown RBP14.31□□□□□ -0.12
SSH2-208ENST00000579040 ZGPATQ8N5A5 531 aaKnown RBP14.31□□□□□ -0.12
SSH2-208ENST00000579040 ZNF296Q8WUU4 475 aaPredicted RBP14.31□□□□□ -0.12
SSH2-208ENST00000579040 PRDX5P30044 214 aa14.3□□□□□ -0.12
SSH2-208ENST00000579040 RGS19P49795 217 aa14.3□□□□□ -0.12
SSH2-208ENST00000579040 CACNB3P54284 484 aa14.3□□□□□ -0.12
SSH2-208ENST00000579040 MAP3K9P80192 1104 aa14.3□□□□□ -0.12
SSH2-208ENST00000579040 CCDC102BQ68D86 513 aa14.3□□□□□ -0.12
SSH2-208ENST00000579040 OTUD7BQ6GQQ9 843 aa14.3□□□□□ -0.12
SSH2-208ENST00000579040 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.3□□□□□ -0.12
SSH2-208ENST00000579040 CDAN1Q8IWY9 1227 aa14.3□□□□□ -0.12
SSH2-208ENST00000579040 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.3□□□□□ -0.12
SSH2-208ENST00000579040 CLUAP1Q96AJ1 413 aa14.3□□□□□ -0.12
SSH2-208ENST00000579040 DAGLAQ9Y4D2 1042 aa14.3□□□□□ -0.12
SSH2-208ENST00000579040 CSADQ9Y600 493 aa14.3□□□□□ -0.12
SSH2-208ENST00000579040 TESPA1A2RU30 521 aaPredicted RBP14.29□□□□□ -0.12
SSH2-208ENST00000579040 FKTNO75072 461 aa14.29□□□□□ -0.12
SSH2-208ENST00000579040 ADORA1P30542 326 aa14.29□□□□□ -0.12
SSH2-208ENST00000579040 GJA5P36382 358 aa14.29□□□□□ -0.12
SSH2-208ENST00000579040 MVPQ14764 893 aaKnown RBP14.29□□□□□ -0.12
SSH2-208ENST00000579040 DCAF15Q66K64 600 aa14.29□□□□□ -0.12
SSH2-208ENST00000579040 OPTNQ96CV9 577 aa14.29□□□□□ -0.12
SSH2-208ENST00000579040 ELP3Q9H9T3 547 aa14.29□□□□□ -0.12
SSH2-208ENST00000579040 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms