RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 VGLL4Q14135 290 aa11.14□□□□□ -0.63
BRIP1-204ENST00000579028 GCKRQ14397 625 aa11.14□□□□□ -0.63
BRIP1-204ENST00000579028 TSPYL6Q8N831 410 aa11.14□□□□□ -0.63
BRIP1-204ENST00000579028 SH3TC2Q8TF17 1288 aa11.14□□□□□ -0.63
BRIP1-204ENST00000579028 SHISA4Q96DD7 197 aa11.14□□□□□ -0.63
BRIP1-204ENST00000579028 TEPSINQ96N21 525 aa11.14□□□□□ -0.63
BRIP1-204ENST00000579028 ZCCHC17Q9NP64 241 aaKnown RBP11.14□□□□□ -0.63
BRIP1-204ENST00000579028 RBM27Q9P2N5 1060 aaKnown RBP11.14□□□□□ -0.63
BRIP1-204ENST00000579028 ZNF70Q9UC06 446 aaPredicted RBP11.14□□□□□ -0.63
BRIP1-204ENST00000579028 CENPFP49454 3210 aa11.14□□□□□ -0.63
BRIP1-204ENST00000579028 BRCA2P51587 3418 aa11.13□□□□□ -0.63
BRIP1-204ENST00000579028 FAM205AQ6ZU69 1335 aa11.13□□□□□ -0.63
BRIP1-204ENST00000579028 ANKRD18BA2A2Z9 1011 aa11.13□□□□□ -0.63
BRIP1-204ENST00000579028 MYCP01106 439 aaPredicted RBP11.13□□□□□ -0.63
BRIP1-204ENST00000579028 LACTBP83111 547 aaPredicted RBP11.13□□□□□ -0.63
BRIP1-204ENST00000579028 KIF22Q14807 665 aa11.13□□□□□ -0.63
BRIP1-204ENST00000579028 HELBQ8NG08 1087 aaPredicted RBP11.13□□□□□ -0.63
BRIP1-204ENST00000579028 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.13□□□□□ -0.63
BRIP1-204ENST00000579028 STK31Q9BXU1 1019 aa11.13□□□□□ -0.63
BRIP1-204ENST00000579028 ARHGAP39Q9C0H5 1083 aa11.13□□□□□ -0.63
BRIP1-204ENST00000579028 PRO3102Q9H379 93 aa11.13□□□□□ -0.63
BRIP1-204ENST00000579028 SERPINA10Q9UK55 444 aa11.13□□□□□ -0.63
BRIP1-204ENST00000579028 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
BRIP1-204ENST00000579028 APAF1O14727 1248 aa11.12□□□□□ -0.63
BRIP1-204ENST00000579028 WDHD1O75717 1129 aaPredicted RBP11.12□□□□□ -0.63
BRIP1-204ENST00000579028 G2E3Q7L622 706 aa11.12□□□□□ -0.63
BRIP1-204ENST00000579028 CDAN1Q8IWY9 1227 aa11.12□□□□□ -0.63
BRIP1-204ENST00000579028 MYH16Q9H6N6 1097 aa11.12□□□□□ -0.63
BRIP1-204ENST00000579028 TDRD3Q9H7E2 651 aaKnown RBP11.12□□□□□ -0.63
BRIP1-204ENST00000579028 JAG2Q9Y219 1238 aa11.12□□□□□ -0.63
BRIP1-204ENST00000579028 CSADQ9Y600 493 aa11.12□□□□□ -0.63
BRIP1-204ENST00000579028 DLL1O00548 723 aa11.11□□□□□ -0.63
BRIP1-204ENST00000579028 CETPP11597 493 aa11.11□□□□□ -0.63
BRIP1-204ENST00000579028 MTFR1Q15390 333 aa11.11□□□□□ -0.63
BRIP1-204ENST00000579028 UBE2Q1Q7Z7E8 422 aa11.11□□□□□ -0.63
BRIP1-204ENST00000579028 DZIP1LQ8IYY4 767 aaKnown RBP11.11□□□□□ -0.63
BRIP1-204ENST00000579028 LINS1Q8NG48 757 aa11.11□□□□□ -0.63
BRIP1-204ENST00000579028 NKX2-3Q8TAU0 364 aa11.11□□□□□ -0.63
BRIP1-204ENST00000579028 DPF3Q92784 378 aa11.11□□□□□ -0.63
BRIP1-204ENST00000579028 TMEM39BQ9GZU3 492 aa11.11□□□□□ -0.63
BRIP1-204ENST00000579028 TTF2Q9UNY4 1162 aaKnown RBP11.11□□□□□ -0.63
BRIP1-204ENST00000579028 TCP10L2B9ZVM9 353 aa11.1□□□□□ -0.63
BRIP1-204ENST00000579028 BTBD19C9JJ37 291 aa11.1□□□□□ -0.63
BRIP1-204ENST00000579028 TNNI2P48788 182 aa11.1□□□□□ -0.63
BRIP1-204ENST00000579028 FOXO4P98177 505 aa11.1□□□□□ -0.63
BRIP1-204ENST00000579028 IFIT5Q13325 482 aaKnown RBP11.1□□□□□ -0.63
BRIP1-204ENST00000579028 MFSD14BQ5SR56 506 aa11.1□□□□□ -0.63
BRIP1-204ENST00000579028 ERO1BQ86YB8 467 aa11.1□□□□□ -0.63
BRIP1-204ENST00000579028 TDRD7Q8NHU6 1098 aaKnown RBP11.1□□□□□ -0.63
BRIP1-204ENST00000579028 HTATIP2Q9BUP3 242 aa11.1□□□□□ -0.63
BRIP1-204ENST00000579028 SRRDQ9UH36 339 aa11.1□□□□□ -0.63
BRIP1-204ENST00000579028 SNCAIPQ9Y6H5 919 aa11.1□□□□□ -0.63
BRIP1-204ENST00000579028 TRIOBPQ9H2D6 2365 aa11.09□□□□□ -0.63
BRIP1-204ENST00000579028 GJB1P08034 283 aa11.09□□□□□ -0.63
BRIP1-204ENST00000579028 CTGFP29279 349 aa11.09□□□□□ -0.63
BRIP1-204ENST00000579028 CRKP46108 304 aa11.09□□□□□ -0.63
BRIP1-204ENST00000579028 GJA8P48165 433 aa11.09□□□□□ -0.63
BRIP1-204ENST00000579028 SNAPC2Q13487 334 aa11.09□□□□□ -0.63
BRIP1-204ENST00000579028 C17orf99Q6UX52 265 aa11.09□□□□□ -0.63
BRIP1-204ENST00000579028 SLC17A8Q8NDX2 589 aa11.09□□□□□ -0.63
BRIP1-204ENST00000579028 DNAAF4Q8WXU2 420 aa11.09□□□□□ -0.63
BRIP1-204ENST00000579028 A0A1W2PPC1 479 aa11.08□□□□□ -0.64
BRIP1-204ENST00000579028 IRF6O14896 467 aa11.08□□□□□ -0.64
BRIP1-204ENST00000579028 HOXD10P28358 340 aa11.08□□□□□ -0.64
BRIP1-204ENST00000579028 GRK4P32298 578 aa11.08□□□□□ -0.64
BRIP1-204ENST00000579028 FLIIQ13045 1269 aa11.08□□□□□ -0.64
BRIP1-204ENST00000579028 PPIL2Q13356 520 aa11.08□□□□□ -0.64
BRIP1-204ENST00000579028 TRIM47Q96LD4 638 aa11.08□□□□□ -0.64
BRIP1-204ENST00000579028 NR2E3Q9Y5X4 410 aa11.08□□□□□ -0.64
BRIP1-204ENST00000579028 ADGRA2Q96PE1 1338 aa11.08□□□□□ -0.64
BRIP1-204ENST00000579028 CACNA1FO60840 1977 aa11.07□□□□□ -0.64
BRIP1-204ENST00000579028 ZBTB7BO15156 539 aaPredicted RBP11.07□□□□□ -0.64
BRIP1-204ENST00000579028 CCL5P13501 91 aa11.07□□□□□ -0.64
BRIP1-204ENST00000579028 OSBPP22059 807 aa11.07□□□□□ -0.64
BRIP1-204ENST00000579028 PSMC4P43686 418 aa11.07□□□□□ -0.64
BRIP1-204ENST00000579028 HDLBPQ00341 1268 aaKnown RBP11.07□□□□□ -0.64
BRIP1-204ENST00000579028 UBE4AQ14139 1066 aa11.07□□□□□ -0.64
BRIP1-204ENST00000579028 TWISTNBQ3B726 338 aaPredicted RBP11.07□□□□□ -0.64
BRIP1-204ENST00000579028 LDHAL6AQ6ZMR3 332 aa11.07□□□□□ -0.64
BRIP1-204ENST00000579028 TSR2Q969E8 191 aaKnown RBP11.07□□□□□ -0.64
BRIP1-204ENST00000579028 WRNIP1Q96S55 665 aa11.07□□□□□ -0.64
BRIP1-204ENST00000579028 CHMP3Q9Y3E7 222 aa11.07□□□□□ -0.64
BRIP1-204ENST00000579028 RIPOR2Q9Y4F9 1068 aa11.07□□□□□ -0.64
BRIP1-204ENST00000579028 PLIN1O60240 522 aa11.06□□□□□ -0.64
BRIP1-204ENST00000579028 HIBADHP31937 336 aaKnown RBP11.06□□□□□ -0.64
BRIP1-204ENST00000579028 GYG1P46976 350 aa11.06□□□□□ -0.64
BRIP1-204ENST00000579028 PPATQ06203 517 aa11.06□□□□□ -0.64
BRIP1-204ENST00000579028 FKBP5Q13451 457 aaPredicted RBP11.06□□□□□ -0.64
BRIP1-204ENST00000579028 CCDC57Q2TAC2 916 aa11.06□□□□□ -0.64
BRIP1-204ENST00000579028 LMBR1LQ6UX01 489 aa11.06□□□□□ -0.64
BRIP1-204ENST00000579028 ANKRD23Q86SG2 305 aa11.06□□□□□ -0.64
BRIP1-204ENST00000579028 FAM83AQ86UY5 434 aa11.06□□□□□ -0.64
BRIP1-204ENST00000579028 RAET1EQ8TD07 263 aa11.06□□□□□ -0.64
BRIP1-204ENST00000579028 ZKSCAN4Q969J2 545 aaPredicted RBP11.06□□□□□ -0.64
BRIP1-204ENST00000579028 HOOK2Q96ED9 719 aa11.06□□□□□ -0.64
BRIP1-204ENST00000579028 ZNF594Q96JF6 807 aaPredicted RBP11.06□□□□□ -0.64
BRIP1-204ENST00000579028 FAM84BQ96KN1 310 aaPredicted RBP11.06□□□□□ -0.64
BRIP1-204ENST00000579028 CNNM1Q9NRU3 951 aa11.06□□□□□ -0.64
BRIP1-204ENST00000579028 CPA4Q9UI42 421 aa11.06□□□□□ -0.64
BRIP1-204ENST00000579028 MYPNQ86TC9 1320 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms