RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 CHL1O00533 1208 aa9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 CCT4P50991 539 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 DLGAP5Q15398 846 aa9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 ATXN2LQ8WWM7 1075 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 ZNF428Q96B54 188 aa9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 MXD3Q9BW11 206 aa9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 ZFYVE28Q9HCC9 887 aa9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 ZCCHC17Q9NP64 241 aaKnown RBP9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 BSDC1Q9NW68 430 aaPredicted RBP9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 LEMD3Q9Y2U8 911 aa9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 RIPOR2Q9Y4F9 1068 aa9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 DOCK3Q8IZD9 2030 aa9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 MYH3P11055 1940 aa9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 FAM205AQ6ZU69 1335 aa9.3□□□□□ -0.92
CDK5RAP3-209ENST00000578663 MYO1BO43795 1136 aa9.29□□□□□ -0.92
CDK5RAP3-209ENST00000578663 WDHD1O75717 1129 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-209ENST00000578663 RIPK4P57078 832 aa9.29□□□□□ -0.92
CDK5RAP3-209ENST00000578663 GOLGA2Q08379 1002 aa9.29□□□□□ -0.92
CDK5RAP3-209ENST00000578663 TAF1CQ15572 869 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-209ENST00000578663 KRT24Q2M2I5 525 aa9.29□□□□□ -0.92
CDK5RAP3-209ENST00000578663 TTLL5Q6EMB2 1281 aa9.29□□□□□ -0.92
CDK5RAP3-209ENST00000578663 KIAA0825Q8IV33 1275 aa9.29□□□□□ -0.92
CDK5RAP3-209ENST00000578663 MS4A4AQ96JQ5 239 aa9.29□□□□□ -0.92
CDK5RAP3-209ENST00000578663 MINPP1Q9UNW1 487 aa9.29□□□□□ -0.92
CDK5RAP3-209ENST00000578663 TMPOP42166 694 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-209ENST00000578663 CTSWP56202 376 aa9.28□□□□□ -0.92
CDK5RAP3-209ENST00000578663 DDX10Q13206 875 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-209ENST00000578663 TMEM31Q5JXX7 168 aa9.28□□□□□ -0.92
CDK5RAP3-209ENST00000578663 RIC3Q7Z5B4 369 aa9.28□□□□□ -0.92
CDK5RAP3-209ENST00000578663 BRI3BPQ8WY22 251 aa9.28□□□□□ -0.92
CDK5RAP3-209ENST00000578663 FBXW7Q969H0 707 aa9.28□□□□□ -0.92
CDK5RAP3-209ENST00000578663 OPTNQ96CV9 577 aa9.28□□□□□ -0.92
CDK5RAP3-209ENST00000578663 CRISPLD2Q9H0B8 497 aa9.28□□□□□ -0.92
CDK5RAP3-209ENST00000578663 CWC25Q9NXE8 425 aaPredicted RBP9.28□□□□□ -0.92
CDK5RAP3-209ENST00000578663 SRRDQ9UH36 339 aa9.28□□□□□ -0.92
CDK5RAP3-209ENST00000578663 SPEF2Q9C093 1822 aa9.28□□□□□ -0.92
CDK5RAP3-209ENST00000578663 EPG5Q9HCE0 2579 aa9.27□□□□□ -0.92
CDK5RAP3-209ENST00000578663 MAST2Q6P0Q8 1798 aa9.27□□□□□ -0.92
CDK5RAP3-209ENST00000578663 SPDYE2BA6NHP3 402 aa9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 TLR2O60603 784 aa9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 USP2O75604 605 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 TFRCP02786 760 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 SPDYE6P0CI01 402 aa9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 CAPN2P17655 700 aa9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 OSBPP22059 807 aa9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 GTF2A2P52657 109 aa9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 FKBP1AP62942 108 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 MDM2Q00987 491 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 NHLH1Q02575 133 aa9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 TNFAIP1Q13829 316 aa9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 KIF22Q14807 665 aa9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 NBPF12Q5TAG4 269 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 NECAB2Q7Z6G3 386 aa9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 TRIM47Q96LD4 638 aa9.27□□□□□ -0.93
CDK5RAP3-209ENST00000578663 C5orf42Q9H799 3197 aa9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 CCL15-CCL14A0A0B4J2E2 113 aa9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 UBXN2AP68543 259 aa9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 GTF2IP78347 998 aa9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 FOXK2Q01167 660 aa9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 CCL15Q16663 113 aa9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 TXNRD3Q86VQ6 643 aa9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 FAM43AQ8N2R8 423 aa9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 HELBQ8NG08 1087 aaPredicted RBP9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 TTLL11Q8NHH1 800 aa9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 DEFB118Q96PH6 123 aa9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 CCDC85AQ96PX6 553 aaPredicted RBP9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 ANKRD2Q9GZV1 360 aa9.26□□□□□ -0.93
CDK5RAP3-209ENST00000578663 ARAP2Q8WZ64 1704 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 GPR37L1O60883 481 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 RASA3Q14644 834 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 CFAP100Q494V2 611 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 C15orf52Q6ZUT6 534 aaKnown RBP9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 CERS5Q8N5B7 392 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 RAET1EQ8TD07 263 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 MYD88Q99836 296 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 METTL22Q9BUU2 404 aaPredicted RBP9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 GREM2Q9H772 168 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 ELP3Q9H9T3 547 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 CD209Q9NNX6 404 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 PAK6Q9NQU5 681 aaPredicted RBP9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 THEGQ9P2T0 379 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 ZNF318Q5VUA4 2279 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 DCHS1Q96JQ0 3298 aa9.25□□□□□ -0.93
CDK5RAP3-209ENST00000578663 CHD8Q9HCK8 2581 aa9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 ZFHX4Q86UP3 3567 aa9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 CLRN2A0PK11 232 aa9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 FAM86C2PA6NEL3 165 aa9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 SPDYE5A6NIY4 337 aa9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 DDX58O95786 925 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 IGHMBP2P38935 993 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 MRPS5P82675 430 aaKnown RBP9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 VGLL4Q14135 290 aa9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 DUSP27Q5VZP5 1158 aa9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 CHMP4AQ9BY43 222 aa9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 VEZTQ9HBM0 779 aa9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 BIN2Q9UBW5 565 aaPredicted RBP9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 CSADQ9Y600 493 aa9.24□□□□□ -0.93
CDK5RAP3-209ENST00000578663 MYPNQ86TC9 1320 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms