RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 CRKP46108 304 aa26.52■■□□□ 1.84
TSEN54-205ENST00000578415 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.52■■□□□ 1.84
TSEN54-205ENST00000578415 MS4A4AQ96JQ5 239 aa26.52■■□□□ 1.84
TSEN54-205ENST00000578415 TMEM39BQ9GZU3 492 aa26.52■■□□□ 1.84
TSEN54-205ENST00000578415 OTOFQ9HC10 1997 aa26.52■■□□□ 1.84
TSEN54-205ENST00000578415 PTPN22Q9Y2R2 807 aa26.52■■□□□ 1.84
TSEN54-205ENST00000578415 UTYO14607 1347 aa26.51■■□□□ 1.83
TSEN54-205ENST00000578415 TCP10L2B9ZVM9 353 aa26.51■■□□□ 1.83
TSEN54-205ENST00000578415 CNKSR2Q8WXI2 1034 aa26.51■■□□□ 1.83
TSEN54-205ENST00000578415 MROH5Q6ZUA9 1318 aa26.5■■□□□ 1.83
TSEN54-205ENST00000578415 INTS3Q68E01 1043 aaKnown RBP26.5■■□□□ 1.83
TSEN54-205ENST00000578415 FBXO33Q7Z6M2 555 aa26.5■■□□□ 1.83
TSEN54-205ENST00000578415 ARAP2Q8WZ64 1704 aa26.5■■□□□ 1.83
TSEN54-205ENST00000578415 SP3Q02447 781 aa26.49■■□□□ 1.83
TSEN54-205ENST00000578415 BICC1Q9H694 974 aaKnown RBP26.49■■□□□ 1.83
TSEN54-205ENST00000578415 EFCC1Q9HA90 598 aa26.49■■□□□ 1.83
TSEN54-205ENST00000578415 IQSEC3Q9UPP2 1182 aaPredicted RBP26.49■■□□□ 1.83
TSEN54-205ENST00000578415 ANP32CO43423 234 aa26.48■■□□□ 1.83
TSEN54-205ENST00000578415 VGLL4Q14135 290 aa26.48■■□□□ 1.83
TSEN54-205ENST00000578415 RABL6Q3YEC7 729 aaPredicted RBP26.48■■□□□ 1.83
TSEN54-205ENST00000578415 LRRC24Q50LG9 513 aa26.48■■□□□ 1.83
TSEN54-205ENST00000578415 BRI3BPQ8WY22 251 aa26.48■■□□□ 1.83
TSEN54-205ENST00000578415 ARMC5Q96C12 935 aa26.48■■□□□ 1.83
TSEN54-205ENST00000578415 MAP3K9P80192 1104 aa26.47■■□□□ 1.83
TSEN54-205ENST00000578415 DDX55Q8NHQ9 600 aaKnown RBP eCLIP26.47■■□□□ 1.83
TSEN54-205ENST00000578415 TNNI2P48788 182 aa26.46■■□□□ 1.83
TSEN54-205ENST00000578415 CHAF1AQ13111 956 aaPredicted RBP26.46■■□□□ 1.83
TSEN54-205ENST00000578415 VPS37DQ86XT2 251 aa26.46■■□□□ 1.83
TSEN54-205ENST00000578415 ANKRD44Q8N8A2 993 aa26.46■■□□□ 1.83
TSEN54-205ENST00000578415 VGLL2Q8N8G2 317 aa26.46■■□□□ 1.83
TSEN54-205ENST00000578415 MKI67P46013 3256 aaKnown RBP26.45■■□□□ 1.83
TSEN54-205ENST00000578415 HDLBPQ00341 1268 aaKnown RBP26.45■■□□□ 1.82
TSEN54-205ENST00000578415 CCL15-CCL14A0A0B4J2E2 113 aa26.44■■□□□ 1.82
TSEN54-205ENST00000578415 CACNB3P54284 484 aa26.44■■□□□ 1.82
TSEN54-205ENST00000578415 CCL15Q16663 113 aa26.44■■□□□ 1.82
TSEN54-205ENST00000578415 METTL24Q5JXM2 366 aa26.44■■□□□ 1.82
TSEN54-205ENST00000578415 TBC1D22AQ8WUA7 517 aa26.44■■□□□ 1.82
TSEN54-205ENST00000578415 CENPFP49454 3210 aa26.44■■□□□ 1.82
TSEN54-205ENST00000578415 GTF2A2P52657 109 aa26.43■■□□□ 1.82
TSEN54-205ENST00000578415 TAF1CQ15572 869 aaPredicted RBP26.43■■□□□ 1.82
TSEN54-205ENST00000578415 FAM43AQ8N2R8 423 aa26.43■■□□□ 1.82
TSEN54-205ENST00000578415 OTUD5Q96G74 571 aa26.43■■□□□ 1.82
TSEN54-205ENST00000578415 CSADQ9Y600 493 aa26.43■■□□□ 1.82
TSEN54-205ENST00000578415 PDE8BO95263 885 aa26.42■■□□□ 1.82
TSEN54-205ENST00000578415 CAVIN4Q5BKX8 364 aa26.42■■□□□ 1.82
TSEN54-205ENST00000578415 TEKT1Q969V4 418 aa26.42■■□□□ 1.82
TSEN54-205ENST00000578415 ZNF521Q96K83 1311 aa26.41■■□□□ 1.82
TSEN54-205ENST00000578415 SPDYE5A6NIY4 337 aa26.41■■□□□ 1.82
TSEN54-205ENST00000578415 BCAMP50895 628 aa26.41■■□□□ 1.82
TSEN54-205ENST00000578415 FAM9BQ8IZU0 186 aa26.41■■□□□ 1.82
TSEN54-205ENST00000578415 MRPL50Q8N5N7 158 aaKnown RBP26.41■■□□□ 1.82
TSEN54-205ENST00000578415 KLHDC4Q8TBB5 520 aa26.41■■□□□ 1.82
TSEN54-205ENST00000578415 ZDHHC15Q96MV8 337 aa26.41■■□□□ 1.82
TSEN54-205ENST00000578415 ZFYVE28Q9HCC9 887 aa26.41■■□□□ 1.82
TSEN54-205ENST00000578415 SNCAIPQ9Y6H5 919 aa26.41■■□□□ 1.82
TSEN54-205ENST00000578415 KIAA0100Q14667 2235 aaKnown RBP26.41■■□□□ 1.82
TSEN54-205ENST00000578415 FRAT2O75474 233 aaPredicted RBP26.4■■□□□ 1.82
TSEN54-205ENST00000578415 EN2P19622 333 aaPredicted RBP26.4■■□□□ 1.82
TSEN54-205ENST00000578415 APOBEC3HQ6NTF7 200 aaKnown RBP26.4■■□□□ 1.82
TSEN54-205ENST00000578415 RBBP6Q7Z6E9 1792 aaKnown RBP26.4■■□□□ 1.82
TSEN54-205ENST00000578415 BRCA2P51587 3418 aa26.4■■□□□ 1.82
TSEN54-205ENST00000578415 GCC1Q96CN9 775 aa26.39■■□□□ 1.82
TSEN54-205ENST00000578415 ZNF333Q96JL9 665 aa26.39■■□□□ 1.82
TSEN54-205ENST00000578415 MRIQ9BWK5 157 aa26.39■■□□□ 1.82
TSEN54-205ENST00000578415 FAM83AQ86UY5 434 aa26.38■■□□□ 1.81
TSEN54-205ENST00000578415 PTCH2Q9Y6C5 1203 aa26.38■■□□□ 1.81
TSEN54-205ENST00000578415 FGFR2P21802 821 aa26.37■■□□□ 1.81
TSEN54-205ENST00000578415 FKBP1CQ5VVH2 108 aa26.37■■□□□ 1.81
TSEN54-205ENST00000578415 ERO1BQ86YB8 467 aa26.37■■□□□ 1.81
TSEN54-205ENST00000578415 WRNIP1Q96S55 665 aa26.37■■□□□ 1.81
TSEN54-205ENST00000578415 SUGT1Q9Y2Z0 365 aa26.37■■□□□ 1.81
TSEN54-205ENST00000578415 KIF16BQ96L93 1317 aa26.37■■□□□ 1.81
TSEN54-205ENST00000578415 ZKSCAN4Q969J2 545 aaPredicted RBP26.36■■□□□ 1.81
TSEN54-205ENST00000578415 USP44Q9H0E7 712 aa26.36■■□□□ 1.81
TSEN54-205ENST00000578415 TMOD2Q9NZR1 351 aa26.36■■□□□ 1.81
TSEN54-205ENST00000578415 PTPRCP08575 1304 aa26.36■■□□□ 1.81
TSEN54-205ENST00000578415 IRF6O14896 467 aa26.35■■□□□ 1.81
TSEN54-205ENST00000578415 CETPP11597 493 aa26.35■■□□□ 1.81
TSEN54-205ENST00000578415 ARHGEF6Q15052 776 aa26.35■■□□□ 1.81
TSEN54-205ENST00000578415 PUM3Q15397 648 aaKnown RBP26.35■■□□□ 1.81
TSEN54-205ENST00000578415 RPAP1Q9BWH6 1393 aaPredicted RBP26.34■■□□□ 1.81
TSEN54-205ENST00000578415 BTBD19C9JJ37 291 aa26.34■■□□□ 1.81
TSEN54-205ENST00000578415 TLR2O60603 784 aa26.34■■□□□ 1.81
TSEN54-205ENST00000578415 SLC9C1Q4G0N8 1177 aa26.34■■□□□ 1.81
TSEN54-205ENST00000578415 HHIPL2Q6UWX4 724 aa26.34■■□□□ 1.81
TSEN54-205ENST00000578415 MAST3O60307 1309 aa26.34■■□□□ 1.81
TSEN54-205ENST00000578415 IFIT1P09914 478 aaKnown RBP26.33■■□□□ 1.81
TSEN54-205ENST00000578415 RFX5P48382 616 aaPredicted RBP26.33■■□□□ 1.81
TSEN54-205ENST00000578415 SNAPC2Q13487 334 aa26.33■■□□□ 1.81
TSEN54-205ENST00000578415 HABP4Q5JVS0 413 aaKnown RBP26.33■■□□□ 1.81
TSEN54-205ENST00000578415 SSH1Q8WYL5 1049 aa26.33■■□□□ 1.81
TSEN54-205ENST00000578415 TMEM106CQ9BVX2 250 aa26.33■■□□□ 1.81
TSEN54-205ENST00000578415 ARHGAP39Q9C0H5 1083 aa26.33■■□□□ 1.81
TSEN54-205ENST00000578415 ZCCHC17Q9NP64 241 aaKnown RBP26.33■■□□□ 1.81
TSEN54-205ENST00000578415 PPIL2Q13356 520 aa26.32■■□□□ 1.8
TSEN54-205ENST00000578415 HOOK2Q96ED9 719 aa26.32■■□□□ 1.8
TSEN54-205ENST00000578415 DCAF15Q66K64 600 aa26.31■■□□□ 1.8
TSEN54-205ENST00000578415 NBPF11Q86T75 865 aa26.31■■□□□ 1.8
TSEN54-205ENST00000578415 EYA2O00167 538 aa26.3■■□□□ 1.8
TSEN54-205ENST00000578415 LACTBP83111 547 aaPredicted RBP26.3■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms