RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 CHD4Q14839 1912 aa13.66□□□□□ -0.22
TRAPPC8-204ENST00000578252 PDS5AQ29RF7 1337 aaKnown RBP13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 CCDC88AQ3V6T2 1871 aa13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 WTIPA6NIX2 430 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 GLRX3O76003 335 aaKnown RBP13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 HOXB1P14653 301 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 KLRK1P26718 216 aa13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 PHKA1P46020 1223 aa13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 BCAMP50895 628 aa13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 AOC3Q16853 763 aa13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 ARHGAP27Q6ZUM4 889 aa13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 TXNRD3Q86VQ6 643 aa13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 LARGE2Q8N3Y3 721 aa13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 GPR101Q96P66 508 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 ZNF277Q9NRM2 450 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 SBF1O95248 1867 aa13.65□□□□□ -0.22
TRAPPC8-204ENST00000578252 PSME4Q14997 1843 aa13.64□□□□□ -0.23
TRAPPC8-204ENST00000578252 AKAP11Q9UKA4 1901 aa13.64□□□□□ -0.23
TRAPPC8-204ENST00000578252 FRAT2O75474 233 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC8-204ENST00000578252 IL1R1P14778 569 aa13.64□□□□□ -0.23
TRAPPC8-204ENST00000578252 LMNB1P20700 586 aa13.64□□□□□ -0.23
TRAPPC8-204ENST00000578252 PODNQ7Z5L7 613 aa13.64□□□□□ -0.23
TRAPPC8-204ENST00000578252 TMC2Q8TDI7 906 aa13.64□□□□□ -0.23
TRAPPC8-204ENST00000578252 OTUD7AQ8TE49 926 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC8-204ENST00000578252 CD209Q9NNX6 404 aa13.64□□□□□ -0.23
TRAPPC8-204ENST00000578252 DENND2AQ9ULE3 1009 aa13.64□□□□□ -0.23
TRAPPC8-204ENST00000578252 RASSF7Q02833 373 aa13.63□□□□□ -0.23
TRAPPC8-204ENST00000578252 NIM1KQ8IY84 436 aa13.63□□□□□ -0.23
TRAPPC8-204ENST00000578252 TDRD7Q8NHU6 1098 aaKnown RBP13.63□□□□□ -0.23
TRAPPC8-204ENST00000578252 JDP2Q8WYK2 163 aa13.63□□□□□ -0.23
TRAPPC8-204ENST00000578252 RYDENQ9NUL5 291 aaKnown RBP13.63□□□□□ -0.23
TRAPPC8-204ENST00000578252 TIAM2Q8IVF5 1701 aa13.62□□□□□ -0.23
TRAPPC8-204ENST00000578252 FAM205CA6NFA0 338 aa13.62□□□□□ -0.23
TRAPPC8-204ENST00000578252 ECE2O60344 883 aa13.62□□□□□ -0.23
TRAPPC8-204ENST00000578252 IGSF3O75054 1194 aa13.62□□□□□ -0.23
TRAPPC8-204ENST00000578252 PI4K2BQ8TCG2 481 aa13.62□□□□□ -0.23
TRAPPC8-204ENST00000578252 AK9Q5TCS8 1911 aa13.62□□□□□ -0.23
TRAPPC8-204ENST00000578252 FAM205AQ6ZU69 1335 aa13.62□□□□□ -0.23
TRAPPC8-204ENST00000578252 SRCAPQ6ZRS2 3230 aa13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 MCAMP43121 646 aa13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 RGS3P49796 1198 aa13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 RASGRF1Q13972 1273 aa13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 TTF1Q15361 905 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 ZGPATQ8N5A5 531 aaKnown RBP13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 SPATA5Q8NB90 893 aa13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 WDR66Q8TBY9 1149 aa13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 TBC1D22AQ8WUA7 517 aa13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 HAUS7Q99871 368 aa13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 DBNDD1Q9H9R9 158 aa13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 HMG20BQ9P0W2 317 aa13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 ZNRF3Q9ULT6 936 aa13.61□□□□□ -0.23
TRAPPC8-204ENST00000578252 DOCK2Q92608 1830 aa13.6□□□□□ -0.23
TRAPPC8-204ENST00000578252 TTC22Q5TAA0 569 aa13.6□□□□□ -0.23
TRAPPC8-204ENST00000578252 TICAM2Q86XR7 235 aa13.6□□□□□ -0.23
TRAPPC8-204ENST00000578252 BOLA2Q9H3K6 86 aa13.6□□□□□ -0.23
TRAPPC8-204ENST00000578252 SALL1Q9NSC2 1324 aa13.6□□□□□ -0.23
TRAPPC8-204ENST00000578252 ZNF646O15015 1829 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC8-204ENST00000578252 COL4A5P29400 1685 aa13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 MAST2Q6P0Q8 1798 aa13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 FKBP1AP62942 108 aaKnown RBP13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 SCARF1Q14162 830 aa13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 LRRFIP1Q32MZ4 808 aaKnown RBP13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 STRIP1Q5VSL9 837 aa13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 TSHZ3Q63HK5 1081 aa13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 HS3ST6Q96QI5 342 aa13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 PAG1Q9NWQ8 432 aa13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 IQSEC3Q9UPP2 1182 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 SCN9AQ15858 1988 aa13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 COL1A1P02452 1464 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 ZC3H4Q9UPT8 1303 aaKnown RBP13.59□□□□□ -0.23
TRAPPC8-204ENST00000578252 MYH7P12883 1935 aa13.58□□□□□ -0.23
TRAPPC8-204ENST00000578252 POTEB3A0JP26 581 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 USP17L3A6NCW0 530 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 USP17L4A6NCW7 530 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 ZAP70P43403 619 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 EIF6P56537 245 aaKnown RBP13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 CHAF1AQ13111 956 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 TNIP1Q15025 636 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 BMP2KLQ5H9B9 411 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 SPTY2D1Q68D10 685 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 TMED8Q6PL24 325 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 POTEBQ6S5H4 581 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 USP17L1Q7RTZ2 530 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 CNTROBQ8N137 903 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 DNAJC2Q99543 621 aaKnown RBP13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 RNF181Q9P0P0 153 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 SUGT1Q9Y2Z0 365 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 MYO3BQ8WXR4 1341 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 RFX7Q2KHR2 1363 aa13.58□□□□□ -0.24
TRAPPC8-204ENST00000578252 GOLGB1Q14789 3259 aaKnown RBP13.57□□□□□ -0.24
TRAPPC8-204ENST00000578252 FZD9O00144 591 aa13.57□□□□□ -0.24
TRAPPC8-204ENST00000578252 GOLIM4O00461 696 aa13.57□□□□□ -0.24
TRAPPC8-204ENST00000578252 PRELPP51888 382 aa13.57□□□□□ -0.24
TRAPPC8-204ENST00000578252 GTF2IP78347 998 aa13.57□□□□□ -0.24
TRAPPC8-204ENST00000578252 TTLL5Q6EMB2 1281 aa13.57□□□□□ -0.24
TRAPPC8-204ENST00000578252 GPR153Q6NV75 609 aa13.57□□□□□ -0.24
TRAPPC8-204ENST00000578252 EVI5LQ96CN4 794 aa13.57□□□□□ -0.24
TRAPPC8-204ENST00000578252 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
TRAPPC8-204ENST00000578252 YDJCA8MPS7 323 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms