RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 PRKG1Q13976 671 aa14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 EPHA10Q5JZY3 1008 aa14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 HELBQ8NG08 1087 aaPredicted RBP14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 TEPSINQ96N21 525 aa14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 CLRN2A0PK11 232 aa14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 MKRN3Q13064 507 aaKnown RBP14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 CCDC184Q52MB2 194 aa14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.15□□□□□ -0.146e-7■■■■□ 23.4
SMARCE1-214ENST00000578112 CLMNQ96JQ2 1002 aa14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 EFCC1Q9HA90 598 aa14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 TMOD2Q9NZR1 351 aa14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 CSADQ9Y600 493 aa14.15□□□□□ -0.14
SMARCE1-214ENST00000578112 F6X3S4 739 aa14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 CRHR2Q13324 411 aa14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 OPTNQ96CV9 577 aa14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 MS4A4AQ96JQ5 239 aa14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 ZDHHC15Q96MV8 337 aa14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 R3HDMLQ9H3Y0 253 aa14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 PCNTO95613 3336 aa14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 SPDYE5A6NIY4 337 aa14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 F8W031 263 aaPredicted RBP14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 GJA5P36382 358 aa14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 DCAF15Q66K64 600 aa14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 HHIPL2Q6UWX4 724 aa14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 TEKT1Q969V4 418 aa14.14□□□□□ -0.15
SMARCE1-214ENST00000578112 SUCLG2Q96I99 432 aa14.13□□□□□ -0.15
SMARCE1-214ENST00000578112 CETPP11597 493 aa14.12□□□□□ -0.15
SMARCE1-214ENST00000578112 NBPF11Q86T75 865 aa14.12□□□□□ -0.15
SMARCE1-214ENST00000578112 ZNF594Q96JF6 807 aaPredicted RBP14.12□□□□□ -0.15
SMARCE1-214ENST00000578112 HDAC5Q9UQL6 1122 aa14.12□□□□□ -0.15
SMARCE1-214ENST00000578112 PDE8BO95263 885 aa14.12□□□□□ -0.15
SMARCE1-214ENST00000578112 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.12□□□□□ -0.15
SMARCE1-214ENST00000578112 VPS37DQ86XT2 251 aa14.12□□□□□ -0.15
SMARCE1-214ENST00000578112 ERO1BQ86YB8 467 aa14.12□□□□□ -0.15
SMARCE1-214ENST00000578112 VGLL2Q8N8G2 317 aa14.12□□□□□ -0.15
SMARCE1-214ENST00000578112 ZNF521Q96K83 1311 aa14.12□□□□□ -0.15
SMARCE1-214ENST00000578112 IFIT1P09914 478 aaKnown RBP14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 PPIL2Q13356 520 aa14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 CD99L2Q8TCZ2 262 aa14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 TDRD3Q9H7E2 651 aaKnown RBP14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 ELP3Q9H9T3 547 aa14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 MYH13Q9UKX3 1938 aa14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 SNAP23O00161 211 aa14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 GYG1P46976 350 aa14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 KIF22Q14807 665 aa14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 WDR66Q8TBY9 1149 aa14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 KAZALD1Q96I82 304 aa14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 PTPN18Q99952 460 aa14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 PCDHAC2Q9Y5I4 1007 aa14.11□□□□□ -0.15
SMARCE1-214ENST00000578112 CCL15-CCL14A0A0B4J2E2 113 aa14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 PLIN1O60240 522 aa14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 VGLL4Q14135 290 aa14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 PUM3Q15397 648 aaKnown RBP14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 CCL15Q16663 113 aa14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 METTL24Q5JXM2 366 aa14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 TMEM106CQ9BVX2 250 aa14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 PPATQ06203 517 aa14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 SNAPC2Q13487 334 aa14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 TAF1CQ15572 869 aaPredicted RBP14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 MRPL50Q8N5N7 158 aaKnown RBP14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 ANKRD44Q8N8A2 993 aa14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 BRI3BPQ8WY22 251 aa14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 ZNF333Q96JL9 665 aa14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 ZNF341Q9BYN7 854 aa14.1□□□□□ -0.15
SMARCE1-214ENST00000578112 SEMA3EO15041 775 aa14.09□□□□□ -0.15
SMARCE1-214ENST00000578112 FGFR2P21802 821 aa14.09□□□□□ -0.15
SMARCE1-214ENST00000578112 ALDH1L2Q3SY69 923 aa14.09□□□□□ -0.15
SMARCE1-214ENST00000578112 BICC1Q9H694 974 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-214ENST00000578112 SALL1Q9NSC2 1324 aa14.09□□□□□ -0.15
SMARCE1-214ENST00000578112 CT47B1P0C2W7 299 aaPredicted RBP14.09□□□□□ -0.15
SMARCE1-214ENST00000578112 NOL9Q5SY16 702 aaKnown RBP14.09□□□□□ -0.15
SMARCE1-214ENST00000578112 SLC4A10Q6U841 1118 aa14.09□□□□□ -0.15
SMARCE1-214ENST00000578112 AOX1Q06278 1338 aa14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 TLR2O60603 784 aa14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 SLC5A1P13866 664 aa14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 ANKRD23Q86SG2 305 aa14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 PUS3Q9BZE2 481 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 SNCAIPQ9Y6H5 919 aa14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 PDS5AQ29RF7 1337 aaKnown RBP14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 TCP10L2B9ZVM9 353 aa14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 E9PSI1 815 aa14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 CIAO1O76071 339 aa14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 NBPF7P0C2Y1 421 aaPredicted RBP14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 FAM151AQ8WW52 585 aa14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 LPIN2Q92539 896 aa14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 ZNF112Q9UJU3 913 aa14.08□□□□□ -0.16
SMARCE1-214ENST00000578112 TMEM39BQ9GZU3 492 aa14.07□□□□□ -0.16
SMARCE1-214ENST00000578112 SPINK5Q9NQ38 1064 aaPredicted RBP14.07□□□□□ -0.16
SMARCE1-214ENST00000578112 FZD1Q9UP38 647 aa14.07□□□□□ -0.16
SMARCE1-214ENST00000578112 FRAT2O75474 233 aaPredicted RBP14.07□□□□□ -0.16
SMARCE1-214ENST00000578112 HOXD10P28358 340 aa14.07□□□□□ -0.16
SMARCE1-214ENST00000578112 GNL3LQ9NVN8 582 aaKnown RBP14.07□□□□□ -0.16
SMARCE1-214ENST00000578112 KCNH4Q9UQ05 1017 aa14.07□□□□□ -0.16
SMARCE1-214ENST00000578112 EYA2O00167 538 aa14.06□□□□□ -0.16
SMARCE1-214ENST00000578112 APOBEC3HQ6NTF7 200 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-214ENST00000578112 ZGPATQ8N5A5 531 aaKnown RBP14.06□□□□□ -0.16
SMARCE1-214ENST00000578112 POTEFA5A3E0 1075 aa14.05□□□□□ -0.16
SMARCE1-214ENST00000578112 MAP4K4O95819 1239 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-214ENST00000578112 SLC9C1Q4G0N8 1177 aa14.05□□□□□ -0.16
SMARCE1-214ENST00000578112 NKX2-3Q8TAU0 364 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms