RNA–Protein interactions for RNA: ENST00000577721.5

SMARCE1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-212ENST00000577721 DNAJB2P25686 324 aa8.95□□□□□ -0.98
SMARCE1-212ENST00000577721 ZNF157P51786 506 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-212ENST00000577721 KIF23Q02241 960 aaPredicted RBP8.95□□□□□ -0.98
SMARCE1-212ENST00000577721 NEUROD2Q15784 382 aa8.95□□□□□ -0.98
SMARCE1-212ENST00000577721 LRP10Q7Z4F1 713 aa8.95□□□□□ -0.98
SMARCE1-212ENST00000577721 DPF2Q92785 391 aa8.95□□□□□ -0.98
SMARCE1-212ENST00000577721 KIFC2Q96AC6 838 aa8.95□□□□□ -0.98
SMARCE1-212ENST00000577721 EYA3Q99504 573 aa8.95□□□□□ -0.98
SMARCE1-212ENST00000577721 ADM5C9JUS6 153 aa8.94□□□□□ -0.98
SMARCE1-212ENST00000577721 TRPA1O75762 1119 aa8.94□□□□□ -0.98
SMARCE1-212ENST00000577721 GPSM2P81274 684 aa8.94□□□□□ -0.98
SMARCE1-212ENST00000577721 LMOD3Q0VAK6 560 aa8.94□□□□□ -0.98
SMARCE1-212ENST00000577721 RTL5Q5HYW3 569 aaPredicted RBP8.94□□□□□ -0.98
SMARCE1-212ENST00000577721 SULF1Q8IWU6 871 aa8.94□□□□□ -0.98
SMARCE1-212ENST00000577721 FAM89AQ96GI7 184 aa8.94□□□□□ -0.98
SMARCE1-212ENST00000577721 ZC3H12CQ9C0D7 883 aaKnown RBP8.94□□□□□ -0.98
SMARCE1-212ENST00000577721 KCNQ5Q9NR82 932 aa8.94□□□□□ -0.98
SMARCE1-212ENST00000577721 BABAM1Q9NWV8 329 aa8.94□□□□□ -0.98
SMARCE1-212ENST00000577721 ATP5J2-PTCD1G3V325 749 aa8.93□□□□□ -0.98
SMARCE1-212ENST00000577721 ECE2O60344 883 aa8.93□□□□□ -0.98
SMARCE1-212ENST00000577721 RPS12P25398 132 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-212ENST00000577721 SOX10P56693 466 aa8.93□□□□□ -0.98
SMARCE1-212ENST00000577721 CELF1Q92879 486 aaKnown RBP8.93□□□□□ -0.98
SMARCE1-212ENST00000577721 RNF186Q9NXI6 227 aa8.93□□□□□ -0.98
SMARCE1-212ENST00000577721 POLLQ9UGP5 575 aa8.93□□□□□ -0.98
SMARCE1-212ENST00000577721 FAM155AB1AL88 458 aaPredicted RBP8.92□□□□□ -0.98
SMARCE1-212ENST00000577721 EGFRP00533 1210 aa8.92□□□□□ -0.98
SMARCE1-212ENST00000577721 TMPOP42166 694 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-212ENST00000577721 RPS8P62241 208 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-212ENST00000577721 SF3B3Q15393 1217 aaKnown RBP8.92□□□□□ -0.98
SMARCE1-212ENST00000577721 KRT24Q2M2I5 525 aa8.92□□□□□ -0.98
SMARCE1-212ENST00000577721 KIF4BQ2VIQ3 1234 aa8.92□□□□□ -0.98
SMARCE1-212ENST00000577721 PLBD2Q8NHP8 589 aa8.92□□□□□ -0.98
SMARCE1-212ENST00000577721 SPSB2Q99619 263 aa8.92□□□□□ -0.98
SMARCE1-212ENST00000577721 SAGE1Q9NXZ1 904 aa8.92□□□□□ -0.98
SMARCE1-212ENST00000577721 CHPF2Q9P2E5 772 aa8.92□□□□□ -0.98
SMARCE1-212ENST00000577721 ANKIB1Q9P2G1 1089 aa8.92□□□□□ -0.98
SMARCE1-212ENST00000577721 IRS4O14654 1257 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-212ENST00000577721 HDGFL1Q5TGJ6 251 aa8.91□□□□□ -0.98
SMARCE1-212ENST00000577721 SCUBE3Q8IX30 993 aa8.91□□□□□ -0.98
SMARCE1-212ENST00000577721 TBC1D16Q8TBP0 767 aa8.91□□□□□ -0.98
SMARCE1-212ENST00000577721 CSRNP1Q96S65 589 aa8.91□□□□□ -0.98
SMARCE1-212ENST00000577721 NPDC1Q9NQX5 325 aaPredicted RBP8.91□□□□□ -0.98
SMARCE1-212ENST00000577721 GGA3Q9NZ52 723 aa8.91□□□□□ -0.98
SMARCE1-212ENST00000577721 CHL1O00533 1208 aa8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 UFL1O94874 794 aa8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 VIL1P09327 827 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 HSP90B1P14625 803 aaKnown RBP8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 SCARF1Q14162 830 aa8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 RIC3Q7Z5B4 369 aa8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 CCDC146Q8IYE0 955 aa8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 CDCA5Q96FF9 252 aa8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 ISCA1Q9BUE6 129 aa8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 TMEM134Q9H6X4 195 aa8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 DBF4Q9UBU7 674 aaPredicted RBP8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 GGA1Q9UJY5 639 aa8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 HDAC9Q9UKV0 1011 aa8.9□□□□□ -0.98
SMARCE1-212ENST00000577721 ASTN2O75129 1339 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-212ENST00000577721 SLC10A3P09131 477 aa8.89□□□□□ -0.99
SMARCE1-212ENST00000577721 GMPRP36959 345 aa8.89□□□□□ -0.99
SMARCE1-212ENST00000577721 TTLL12Q14166 644 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-212ENST00000577721 ANGEL2Q5VTE6 544 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-212ENST00000577721 CTU1Q7Z7A3 348 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-212ENST00000577721 IRF7Q92985 503 aa8.89□□□□□ -0.99
SMARCE1-212ENST00000577721 CCDC85AQ96PX6 553 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-212ENST00000577721 HYPKQ9NX55 129 aa8.89□□□□□ -0.99
SMARCE1-212ENST00000577721 NUP98P52948 1817 aa8.89□□□□□ -0.99
SMARCE1-212ENST00000577721 LAMB4A4D0S4 1761 aa8.89□□□□□ -0.99
SMARCE1-212ENST00000577721 RTL9Q8NET4 1388 aa8.88□□□□□ -0.99
SMARCE1-212ENST00000577721 THSD7BQ9C0I4 1608 aa8.88□□□□□ -0.99
SMARCE1-212ENST00000577721 DUSP27Q5VZP5 1158 aa8.88□□□□□ -0.99
SMARCE1-212ENST00000577721 RSBN1LQ6PCB5 846 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-212ENST00000577721 SEC31BQ9NQW1 1179 aa8.88□□□□□ -0.99
SMARCE1-212ENST00000577721 FCF1Q9Y324 198 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-212ENST00000577721 USP17L3A6NCW0 530 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 USP17L4A6NCW7 530 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 UBE2Q2LH0YL09 131 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 ZBTB24O43167 697 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 TBC1D8O95759 1140 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 USP17L8P0C7I0 530 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 TRIM28Q13263 835 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 WDR43Q15061 677 aaKnown RBP eCLIP8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 RALBP1Q15311 655 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 CCDC152Q4G0S7 254 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 PRAMEF18Q5VWM3 479 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 USP17L1Q7RTZ2 530 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 RASAL3Q86YV0 1011 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 ZBTB38Q8NAP3 1195 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 AGBL3Q8NEM8 1001 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 SNIP1Q8TAD8 396 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 JARID2Q92833 1246 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 RUNDC1Q96C34 613 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 MYD88Q99836 296 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 MYOZ2Q9NPC6 264 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 PODXL2Q9NZ53 605 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 NXF1Q9UBU9 619 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 SCAF8Q9UPN6 1271 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 TRPM7Q96QT4 1865 aa8.87□□□□□ -0.99
SMARCE1-212ENST00000577721 KDM3BQ7LBC6 1761 aa8.86□□□□□ -0.99
SMARCE1-212ENST00000577721 ELL2O00472 640 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms