RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 ATP5JP18859 108 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 FANCCQ00597 558 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 ZNF569Q5MCW4 686 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 SMAP1Q8IYB5 467 aaPredicted RBP12.4□□□□□ -0.42
RNF43-203ENST00000577716 MBD4O95243 580 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 IFFO1Q0D2I5 559 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 BEND3Q5T5X7 828 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 GTF3C6Q969F1 213 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 KCNH3Q9ULD8 1083 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 GIGYF1O75420 1035 aaPredicted RBP12.4□□□□□ -0.42
RNF43-203ENST00000577716 GNAT2P19087 354 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 EVCP57679 992 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 CKAP4Q07065 602 aaKnown RBP12.4□□□□□ -0.42
RNF43-203ENST00000577716 CCDC113Q9H0I3 377 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 CABP5Q9NP86 173 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 EFCAB6Q5THR3 1501 aa12.4□□□□□ -0.42
RNF43-203ENST00000577716 NR1I2O75469 434 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 IL2RBP14784 551 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 ASIC1P78348 528 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 LRMPQ12912 555 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 CUL4AQ13619 759 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 SEPT7Q16181 437 aaKnown RBP12.39□□□□□ -0.43
RNF43-203ENST00000577716 SPTY2D1Q68D10 685 aaPredicted RBP12.39□□□□□ -0.43
RNF43-203ENST00000577716 ORAI2Q96SN7 254 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 C19orf44Q9H6X5 657 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 BCCIPQ9P287 314 aaKnown RBP eCLIP12.39□□□□□ -0.43
RNF43-203ENST00000577716 C6orf229H3BNL8 230 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 A1BGP04217 495 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 GNAQP50148 359 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 ADCK5Q3MIX3 580 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 RILPL1Q5EBL4 403 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 DZIP3Q86Y13 1208 aaKnown RBP12.39□□□□□ -0.43
RNF43-203ENST00000577716 KLHL34Q8N239 644 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 IQUBQ8NA54 791 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 XAGE2Q96GT9 111 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 GUCA1BQ9UMX6 200 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 NIP7Q9Y221 180 aaKnown RBP eCLIP12.39□□□□□ -0.43
RNF43-203ENST00000577716 HEATR3Q7Z4Q2 680 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 PODXL2Q9NZ53 605 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 MAGEB6P1A0A0J9YX57 407 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 ELF2Q15723 593 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 SIRT1Q96EB6 747 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 TMEM87BQ96K49 555 aa12.39□□□□□ -0.43
RNF43-203ENST00000577716 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 SHROOM2Q13796 1616 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 FAM135BQ49AJ0 1406 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 PHACTR2O75167 634 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 CALML3P27482 149 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 KRT2P35908 639 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 DIS3L2Q8IYB7 885 aaKnown RBP12.38□□□□□ -0.43
RNF43-203ENST00000577716 USP28Q96RU2 1077 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 SEC62Q99442 399 aaKnown RBP12.38□□□□□ -0.43
RNF43-203ENST00000577716 LSG1Q9H089 658 aaKnown RBP12.38□□□□□ -0.43
RNF43-203ENST00000577716 SLC52A2Q9HAB3 445 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 NEURL1BA8MQ27 555 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 KRT86O43790 486 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 RHOXF2BP0C7M4 288 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 TSPY3P0CV98 308 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 TSPY8P0CW00 308 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 SSR1P43307 286 aaKnown RBP12.38□□□□□ -0.43
RNF43-203ENST00000577716 PIP4K2BP78356 416 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 SLF2Q8IX21 1173 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 RHOXF2Q9BQY4 288 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 MAP3K4Q9Y6R4 1608 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 CALM1P0DP23 149 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 CALM2P0DP24 149 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 CALM3P0DP25 149 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 KIF5AQ12840 1032 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 DYDC1Q8WWB3 177 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 MMRN2Q9H8L6 949 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 ABCC3O15438 1527 aa12.38□□□□□ -0.43
RNF43-203ENST00000577716 AKR1B15C9JRZ8 316 aaPredicted RBP12.37□□□□□ -0.43
RNF43-203ENST00000577716 E7EWF7 191 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 CAPN2P17655 700 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 RNF187Q5TA31 235 aaPredicted RBP12.37□□□□□ -0.43
RNF43-203ENST00000577716 SPAG5Q96R06 1193 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 CARD6Q9BX69 1037 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 FAM107BQ9H098 131 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 TMOD2Q9NZR1 351 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 LUC7L2Q9Y383 392 aaKnown RBP12.37□□□□□ -0.43
RNF43-203ENST00000577716 RTL9Q8NET4 1388 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 VWA3AA6NCI4 1184 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 MCM7P33993 719 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 UBXN1Q04323 297 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 KRT40Q6A162 431 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 MAATS1Q7Z4T9 603 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 CNGA4Q8IV77 575 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 RPGRQ92834 1020 aaKnown RBP12.37□□□□□ -0.43
RNF43-203ENST00000577716 PHKBQ93100 1093 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 POLR2DO15514 142 aaKnown RBP12.37□□□□□ -0.43
RNF43-203ENST00000577716 TACC1O75410 805 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 KRT83P78385 493 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 PRPF4BQ13523 1007 aaKnown RBP12.37□□□□□ -0.43
RNF43-203ENST00000577716 CCDC42Q96M95 316 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 PHF23Q9BUL5 403 aaPredicted RBP12.37□□□□□ -0.43
RNF43-203ENST00000577716 PPP2R3AQ06190 1150 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 NBPF5PQ86XG9 351 aaPredicted RBP12.37□□□□□ -0.43
RNF43-203ENST00000577716 MYL10Q9BUA6 226 aa12.37□□□□□ -0.43
RNF43-203ENST00000577716 GOPCQ9HD26 462 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms