RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 DZIP1LQ8IYY4 767 aaKnown RBP16.93■□□□□ 0.3
COPS3-214ENST00000577246 TDRD7Q8NHU6 1098 aaKnown RBP16.93■□□□□ 0.3
COPS3-214ENST00000577246 TDRD3Q9H7E2 651 aaKnown RBP16.93■□□□□ 0.3
COPS3-214ENST00000577246 PTCH2Q9Y6C5 1203 aa16.93■□□□□ 0.3
COPS3-214ENST00000577246 CETPP11597 493 aa16.92■□□□□ 0.3
COPS3-214ENST00000577246 PRMT2P55345 433 aa16.92■□□□□ 0.3
COPS3-214ENST00000577246 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.92■□□□□ 0.3
COPS3-214ENST00000577246 OTUD5Q96G74 571 aa16.92■□□□□ 0.3
COPS3-214ENST00000577246 TEPSINQ96N21 525 aa16.92■□□□□ 0.3
COPS3-214ENST00000577246 AOX1Q06278 1338 aa16.92■□□□□ 0.3
COPS3-214ENST00000577246 TCP10L2B9ZVM9 353 aa16.91■□□□□ 0.3
COPS3-214ENST00000577246 GRM8O00222 908 aa16.91■□□□□ 0.3
COPS3-214ENST00000577246 CRKP46108 304 aa16.91■□□□□ 0.3
COPS3-214ENST00000577246 BEND3Q5T5X7 828 aa16.91■□□□□ 0.3
COPS3-214ENST00000577246 VPS37DQ86XT2 251 aa16.91■□□□□ 0.3
COPS3-214ENST00000577246 TMEM39BQ9GZU3 492 aa16.91■□□□□ 0.3
COPS3-214ENST00000577246 TMOD2Q9NZR1 351 aa16.91■□□□□ 0.3
COPS3-214ENST00000577246 SPDYE5A6NIY4 337 aa16.9■□□□□ 0.3
COPS3-214ENST00000577246 TLR2O60603 784 aa16.9■□□□□ 0.3
COPS3-214ENST00000577246 HDLBPQ00341 1268 aaKnown RBP16.9■□□□□ 0.3
COPS3-214ENST00000577246 SNAPC2Q13487 334 aa16.9■□□□□ 0.3
COPS3-214ENST00000577246 ERO1BQ86YB8 467 aa16.9■□□□□ 0.3
COPS3-214ENST00000577246 FAM43AQ8N2R8 423 aa16.9■□□□□ 0.3
COPS3-214ENST00000577246 TBC1D22AQ8WUA7 517 aa16.9■□□□□ 0.3
COPS3-214ENST00000577246 C9orf78Q9NZ63 289 aaPredicted RBP16.9■□□□□ 0.3
COPS3-214ENST00000577246 FANCIQ9NVI1 1328 aa16.9■□□□□ 0.3
COPS3-214ENST00000577246 CENPFP49454 3210 aa16.89■□□□□ 0.29
COPS3-214ENST00000577246 GYG1P46976 350 aa16.89■□□□□ 0.29
COPS3-214ENST00000577246 LACTBP83111 547 aaPredicted RBP16.89■□□□□ 0.29
COPS3-214ENST00000577246 CAP1Q01518 475 aa16.89■□□□□ 0.29
COPS3-214ENST00000577246 CNKSR2Q8WXI2 1034 aa16.89■□□□□ 0.29
COPS3-214ENST00000577246 ZNF594Q96JF6 807 aaPredicted RBP16.89■□□□□ 0.29
COPS3-214ENST00000577246 COLQQ9Y215 455 aaPredicted RBP16.89■□□□□ 0.29
COPS3-214ENST00000577246 FRAT2O75474 233 aaPredicted RBP16.88■□□□□ 0.29
COPS3-214ENST00000577246 CAVIN4Q5BKX8 364 aa16.88■□□□□ 0.29
COPS3-214ENST00000577246 DCAF15Q66K64 600 aa16.88■□□□□ 0.29
COPS3-214ENST00000577246 TEKT1Q969V4 418 aa16.88■□□□□ 0.29
COPS3-214ENST00000577246 FAM84BQ96KN1 310 aaPredicted RBP16.88■□□□□ 0.29
COPS3-214ENST00000577246 MROH5Q6ZUA9 1318 aa16.88■□□□□ 0.29
COPS3-214ENST00000577246 BRCA2P51587 3418 aa16.87■□□□□ 0.29
COPS3-214ENST00000577246 F6X3S4 739 aa16.87■□□□□ 0.29
COPS3-214ENST00000577246 VAMP4O75379 141 aa16.87■□□□□ 0.29
COPS3-214ENST00000577246 ALDH1L1O75891 902 aa16.87■□□□□ 0.29
COPS3-214ENST00000577246 FAM83AQ86UY5 434 aa16.87■□□□□ 0.29
COPS3-214ENST00000577246 CDAN1Q8IWY9 1227 aa16.87■□□□□ 0.29
COPS3-214ENST00000577246 NKX2-3Q8TAU0 364 aa16.87■□□□□ 0.29
COPS3-214ENST00000577246 WRNIP1Q96S55 665 aa16.87■□□□□ 0.29
COPS3-214ENST00000577246 OTOFQ9HC10 1997 aa16.87■□□□□ 0.29
COPS3-214ENST00000577246 MAST3O60307 1309 aa16.87■□□□□ 0.29
COPS3-214ENST00000577246 HOXD10P28358 340 aa16.86■□□□□ 0.29
COPS3-214ENST00000577246 PPIL2Q13356 520 aa16.86■□□□□ 0.29
COPS3-214ENST00000577246 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
COPS3-214ENST00000577246 FKBP1CQ5VVH2 108 aa16.86■□□□□ 0.29
COPS3-214ENST00000577246 SH3TC2Q8TF17 1288 aa16.86■□□□□ 0.29
COPS3-214ENST00000577246 MRIQ9BWK5 157 aa16.86■□□□□ 0.29
COPS3-214ENST00000577246 SNCAIPQ9Y6H5 919 aa16.86■□□□□ 0.29
COPS3-214ENST00000577246 A0A1B0GUL6 1792 aa16.86■□□□□ 0.29
COPS3-214ENST00000577246 KIAA0100Q14667 2235 aaKnown RBP16.85■□□□□ 0.29
COPS3-214ENST00000577246 BTBD19C9JJ37 291 aa16.85■□□□□ 0.29
COPS3-214ENST00000577246 H0YGN5 161 aa16.85■□□□□ 0.29
COPS3-214ENST00000577246 MYCP01106 439 aaPredicted RBP16.85■□□□□ 0.29
COPS3-214ENST00000577246 WDR63Q8IWG1 891 aa16.85■□□□□ 0.29
COPS3-214ENST00000577246 ZDHHC15Q96MV8 337 aa16.85■□□□□ 0.29
COPS3-214ENST00000577246 SUGT1Q9Y2Z0 365 aa16.85■□□□□ 0.29
COPS3-214ENST00000577246 IRF6O14896 467 aa16.84■□□□□ 0.29
COPS3-214ENST00000577246 PPATQ06203 517 aa16.84■□□□□ 0.29
COPS3-214ENST00000577246 CHAF1AQ13111 956 aaPredicted RBP16.84■□□□□ 0.29
COPS3-214ENST00000577246 FBXO33Q7Z6M2 555 aa16.84■□□□□ 0.29
COPS3-214ENST00000577246 SRCIN1Q9C0H9 1055 aa16.84■□□□□ 0.29
COPS3-214ENST00000577246 RPAP1Q9BWH6 1393 aaPredicted RBP16.84■□□□□ 0.29
COPS3-214ENST00000577246 ARAP2Q8WZ64 1704 aa16.84■□□□□ 0.29
COPS3-214ENST00000577246 EXOSC9Q06265 439 aaKnown RBP16.83■□□□□ 0.28
COPS3-214ENST00000577246 ZKSCAN4Q969J2 545 aaPredicted RBP16.83■□□□□ 0.28
COPS3-214ENST00000577246 HTATIP2Q9BUP3 242 aa16.83■□□□□ 0.28
COPS3-214ENST00000577246 ZNF341Q9BYN7 854 aa16.83■□□□□ 0.28
COPS3-214ENST00000577246 ARHGAP39Q9C0H5 1083 aa16.83■□□□□ 0.28
COPS3-214ENST00000577246 RIPOR2Q9Y4F9 1068 aa16.83■□□□□ 0.28
COPS3-214ENST00000577246 CACNA1FO60840 1977 aa16.82■□□□□ 0.28
COPS3-214ENST00000577246 CACNB3P54284 484 aa16.82■□□□□ 0.28
COPS3-214ENST00000577246 METTL24Q5JXM2 366 aa16.82■□□□□ 0.28
COPS3-214ENST00000577246 SLC4A10Q6U841 1118 aa16.82■□□□□ 0.28
COPS3-214ENST00000577246 ANKRD23Q86SG2 305 aa16.82■□□□□ 0.28
COPS3-214ENST00000577246 RAET1EQ8TD07 263 aa16.82■□□□□ 0.28
COPS3-214ENST00000577246 DPF3Q92784 378 aa16.82■□□□□ 0.28
COPS3-214ENST00000577246 SRRDQ9UH36 339 aa16.82■□□□□ 0.28
COPS3-214ENST00000577246 PSMC4P43686 418 aa16.81■□□□□ 0.28
COPS3-214ENST00000577246 C17orf99Q6UX52 265 aa16.81■□□□□ 0.28
COPS3-214ENST00000577246 CHRDL2Q6WN34 429 aa16.81■□□□□ 0.28
COPS3-214ENST00000577246 TRIM47Q96LD4 638 aa16.81■□□□□ 0.28
COPS3-214ENST00000577246 PUS3Q9BZE2 481 aaKnown RBP16.81■□□□□ 0.28
COPS3-214ENST00000577246 IQSEC3Q9UPP2 1182 aaPredicted RBP16.81■□□□□ 0.28
COPS3-214ENST00000577246 KIF16BQ96L93 1317 aa16.8■□□□□ 0.28
COPS3-214ENST00000577246 FMNL1O95466 1100 aaPredicted RBP16.8■□□□□ 0.28
COPS3-214ENST00000577246 GRK4P32298 578 aa16.8■□□□□ 0.28
COPS3-214ENST00000577246 UBXN2AP68543 259 aa16.8■□□□□ 0.28
COPS3-214ENST00000577246 HHIPL2Q6UWX4 724 aa16.8■□□□□ 0.28
COPS3-214ENST00000577246 SUCLG2Q96I99 432 aa16.8■□□□□ 0.28
COPS3-214ENST00000577246 PDHXO00330 501 aa16.79■□□□□ 0.28
COPS3-214ENST00000577246 PDE8BO95263 885 aa16.79■□□□□ 0.28
COPS3-214ENST00000577246 GRIK5Q16478 980 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms