RNA–Protein interactions for RNA: ENST00000577228.1

CDH8-202, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-202ENST00000577228 TNNI2P48788 182 aa14.88□□□□□ -0.03
CDH8-202ENST00000577228 CHAF1AQ13111 956 aaPredicted RBP14.88□□□□□ -0.03
CDH8-202ENST00000577228 INTS3Q68E01 1043 aaKnown RBP14.88□□□□□ -0.03
CDH8-202ENST00000577228 CDAN1Q8IWY9 1227 aa14.88□□□□□ -0.03
CDH8-202ENST00000577228 TEPSINQ96N21 525 aa14.88□□□□□ -0.03
CDH8-202ENST00000577228 PTPN18Q99952 460 aa14.88□□□□□ -0.03
CDH8-202ENST00000577228 IQSEC3Q9UPP2 1182 aaPredicted RBP14.88□□□□□ -0.03
CDH8-202ENST00000577228 UTYO14607 1347 aa14.88□□□□□ -0.03
CDH8-202ENST00000577228 FRAT2O75474 233 aaPredicted RBP14.87□□□□□ -0.03
CDH8-202ENST00000577228 METTL24Q5JXM2 366 aa14.87□□□□□ -0.03
CDH8-202ENST00000577228 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.87□□□□□ -0.03
CDH8-202ENST00000577228 FBXO33Q7Z6M2 555 aa14.87□□□□□ -0.03
CDH8-202ENST00000577228 FAM9BQ8IZU0 186 aa14.87□□□□□ -0.03
CDH8-202ENST00000577228 TMEM39BQ9GZU3 492 aa14.87□□□□□ -0.03
CDH8-202ENST00000577228 BICC1Q9H694 974 aaKnown RBP14.87□□□□□ -0.03
CDH8-202ENST00000577228 EFCC1Q9HA90 598 aa14.87□□□□□ -0.03
CDH8-202ENST00000577228 MAP3K9P80192 1104 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 SP3Q02447 781 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 VGLL4Q14135 290 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 GRIK5Q16478 980 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 RABL6Q3YEC7 729 aaPredicted RBP14.86□□□□□ -0.03
CDH8-202ENST00000577228 LRRC24Q50LG9 513 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 CAVIN4Q5BKX8 364 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 ANKRD44Q8N8A2 993 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 TBC1D22AQ8WUA7 517 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 CNKSR2Q8WXI2 1034 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 BRI3BPQ8WY22 251 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 MS4A4AQ96JQ5 239 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 PTPN22Q9Y2R2 807 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 CSADQ9Y600 493 aa14.86□□□□□ -0.03
CDH8-202ENST00000577228 CCL15-CCL14A0A0B4J2E2 113 aa14.85□□□□□ -0.03
CDH8-202ENST00000577228 GTF2A2P52657 109 aa14.85□□□□□ -0.03
CDH8-202ENST00000577228 HDLBPQ00341 1268 aaKnown RBP14.85□□□□□ -0.03
CDH8-202ENST00000577228 TAF1CQ15572 869 aaPredicted RBP14.85□□□□□ -0.03
CDH8-202ENST00000577228 CCL15Q16663 113 aa14.85□□□□□ -0.03
CDH8-202ENST00000577228 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.85□□□□□ -0.03
CDH8-202ENST00000577228 TEKT1Q969V4 418 aa14.85□□□□□ -0.03
CDH8-202ENST00000577228 POTEFA5A3E0 1075 aa14.84□□□□□ -0.03
CDH8-202ENST00000577228 PDE8BO95263 885 aa14.84□□□□□ -0.03
CDH8-202ENST00000577228 CACNB3P54284 484 aa14.84□□□□□ -0.03
CDH8-202ENST00000577228 VGLL2Q8N8G2 317 aa14.84□□□□□ -0.03
CDH8-202ENST00000577228 ARMC5Q96C12 935 aa14.84□□□□□ -0.03
CDH8-202ENST00000577228 OTUD5Q96G74 571 aa14.84□□□□□ -0.03
CDH8-202ENST00000577228 ZFYVE28Q9HCC9 887 aa14.84□□□□□ -0.03
CDH8-202ENST00000577228 TMOD2Q9NZR1 351 aa14.84□□□□□ -0.03
CDH8-202ENST00000577228 MRPL50Q8N5N7 158 aaKnown RBP14.83□□□□□ -0.04
CDH8-202ENST00000577228 MAST3O60307 1309 aa14.83□□□□□ -0.04
CDH8-202ENST00000577228 PTPRCP08575 1304 aa14.83□□□□□ -0.04
CDH8-202ENST00000577228 ZNF521Q96K83 1311 aa14.83□□□□□ -0.04
CDH8-202ENST00000577228 ZNF316A6NFI3 1004 aaPredicted RBP14.82□□□□□ -0.04
CDH8-202ENST00000577228 SPDYE5A6NIY4 337 aa14.82□□□□□ -0.04
CDH8-202ENST00000577228 BCAMP50895 628 aa14.82□□□□□ -0.04
CDH8-202ENST00000577228 CAP1Q01518 475 aa14.82□□□□□ -0.04
CDH8-202ENST00000577228 ARHGEF6Q15052 776 aa14.82□□□□□ -0.04
CDH8-202ENST00000577228 KLHDC4Q8TBB5 520 aa14.82□□□□□ -0.04
CDH8-202ENST00000577228 GCC1Q96CN9 775 aa14.82□□□□□ -0.04
CDH8-202ENST00000577228 HOOK2Q96ED9 719 aa14.82□□□□□ -0.04
CDH8-202ENST00000577228 ZDHHC15Q96MV8 337 aa14.82□□□□□ -0.04
CDH8-202ENST00000577228 WDHD1O75717 1129 aaPredicted RBP14.81□□□□□ -0.04
CDH8-202ENST00000577228 IFIT1P09914 478 aaKnown RBP14.81□□□□□ -0.04
CDH8-202ENST00000577228 PUM3Q15397 648 aaKnown RBP14.81□□□□□ -0.04
CDH8-202ENST00000577228 FKBP1CQ5VVH2 108 aa14.81□□□□□ -0.04
CDH8-202ENST00000577228 FAM83AQ86UY5 434 aa14.81□□□□□ -0.04
CDH8-202ENST00000577228 FAM43AQ8N2R8 423 aa14.81□□□□□ -0.04
CDH8-202ENST00000577228 WRNIP1Q96S55 665 aa14.81□□□□□ -0.04
CDH8-202ENST00000577228 MRIQ9BWK5 157 aa14.81□□□□□ -0.04
CDH8-202ENST00000577228 SUGT1Q9Y2Z0 365 aa14.81□□□□□ -0.04
CDH8-202ENST00000577228 SNCAIPQ9Y6H5 919 aa14.81□□□□□ -0.04
CDH8-202ENST00000577228 KIF16BQ96L93 1317 aa14.81□□□□□ -0.04
CDH8-202ENST00000577228 KIAA0100Q14667 2235 aaKnown RBP14.81□□□□□ -0.04
CDH8-202ENST00000577228 RBBP6Q7Z6E9 1792 aaKnown RBP14.8□□□□□ -0.04
CDH8-202ENST00000577228 CETPP11597 493 aa14.8□□□□□ -0.04
CDH8-202ENST00000577228 APOBEC3HQ6NTF7 200 aaKnown RBP14.8□□□□□ -0.04
CDH8-202ENST00000577228 ERO1BQ86YB8 467 aa14.8□□□□□ -0.04
CDH8-202ENST00000577228 USP44Q9H0E7 712 aa14.8□□□□□ -0.04
CDH8-202ENST00000577228 RPAP1Q9BWH6 1393 aaPredicted RBP14.8□□□□□ -0.04
CDH8-202ENST00000577228 SLC5A1P13866 664 aa14.79□□□□□ -0.04
CDH8-202ENST00000577228 EN2P19622 333 aaPredicted RBP14.79□□□□□ -0.04
CDH8-202ENST00000577228 FGFR2P21802 821 aa14.79□□□□□ -0.04
CDH8-202ENST00000577228 SNAPC2Q13487 334 aa14.79□□□□□ -0.04
CDH8-202ENST00000577228 SLC9C1Q4G0N8 1177 aa14.79□□□□□ -0.04
CDH8-202ENST00000577228 DCAF15Q66K64 600 aa14.79□□□□□ -0.04
CDH8-202ENST00000577228 HHIPL2Q6UWX4 724 aa14.79□□□□□ -0.04
CDH8-202ENST00000577228 SSH1Q8WYL5 1049 aa14.79□□□□□ -0.04
CDH8-202ENST00000577228 ZKSCAN4Q969J2 545 aaPredicted RBP14.79□□□□□ -0.04
CDH8-202ENST00000577228 ZNF333Q96JL9 665 aa14.79□□□□□ -0.04
CDH8-202ENST00000577228 TMEM106CQ9BVX2 250 aa14.79□□□□□ -0.04
CDH8-202ENST00000577228 PTCH2Q9Y6C5 1203 aa14.79□□□□□ -0.04
CDH8-202ENST00000577228 HTTP42858 3142 aa14.79□□□□□ -0.04
CDH8-202ENST00000577228 BTBD19C9JJ37 291 aa14.78□□□□□ -0.04
CDH8-202ENST00000577228 E9PSI1 815 aa14.78□□□□□ -0.04
CDH8-202ENST00000577228 EYA2O00167 538 aa14.78□□□□□ -0.04
CDH8-202ENST00000577228 ZEB1P37275 1124 aaPredicted RBP14.78□□□□□ -0.04
CDH8-202ENST00000577228 PPIL2Q13356 520 aa14.78□□□□□ -0.04
CDH8-202ENST00000577228 NBPF11Q86T75 865 aa14.78□□□□□ -0.04
CDH8-202ENST00000577228 WDR66Q8TBY9 1149 aa14.78□□□□□ -0.04
CDH8-202ENST00000577228 ZNF341Q9BYN7 854 aa14.78□□□□□ -0.04
CDH8-202ENST00000577228 ZCCHC17Q9NP64 241 aaKnown RBP14.78□□□□□ -0.04
CDH8-202ENST00000577228 IRF6O14896 467 aa14.77□□□□□ -0.05
CDH8-202ENST00000577228 TLR2O60603 784 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms