RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 CNOT7Q9UIV1 285 aaKnown RBP10.44□□□□□ -0.74
NUP88-211ENST00000575976 GTF3C3Q9Y5Q9 886 aa10.44□□□□□ -0.74
NUP88-211ENST00000575976 ZNF646O15015 1829 aaPredicted RBP10.43□□□□□ -0.74
NUP88-211ENST00000575976 PSME4Q14997 1843 aa10.43□□□□□ -0.74
NUP88-211ENST00000575976 GOLIM4O00461 696 aa10.43□□□□□ -0.74
NUP88-211ENST00000575976 ERC2O15083 957 aa10.43□□□□□ -0.74
NUP88-211ENST00000575976 GLRX3O76003 335 aaKnown RBP10.43□□□□□ -0.74
NUP88-211ENST00000575976 MAP4K4O95819 1239 aaPredicted RBP10.43□□□□□ -0.74
NUP88-211ENST00000575976 USP17L8P0C7I0 530 aa10.43□□□□□ -0.74
NUP88-211ENST00000575976 EPS15P42566 896 aa10.43□□□□□ -0.74
NUP88-211ENST00000575976 MICALL2Q8IY33 904 aa10.43□□□□□ -0.74
NUP88-211ENST00000575976 ZGPATQ8N5A5 531 aaKnown RBP10.43□□□□□ -0.74
NUP88-211ENST00000575976 OSBPL3Q9H4L5 887 aa10.43□□□□□ -0.74
NUP88-211ENST00000575976 PIH1D3Q9NQM4 214 aaKnown RBP10.43□□□□□ -0.74
NUP88-211ENST00000575976 GPRC5DQ9NZD1 345 aa10.43□□□□□ -0.74
NUP88-211ENST00000575976 TTF2Q9UNY4 1162 aaKnown RBP10.43□□□□□ -0.74
NUP88-211ENST00000575976 H7C1D1 291 aa10.42□□□□□ -0.74
NUP88-211ENST00000575976 LDHBP07195 334 aaKnown RBP10.42□□□□□ -0.74
NUP88-211ENST00000575976 LMOD1P29536 600 aaPredicted RBP10.42□□□□□ -0.74
NUP88-211ENST00000575976 ZNF280AP59817 542 aaPredicted RBP10.42□□□□□ -0.74
NUP88-211ENST00000575976 RBM26Q5T8P6 1007 aaKnown RBP10.42□□□□□ -0.74
NUP88-211ENST00000575976 SPTY2D1Q68D10 685 aaPredicted RBP10.42□□□□□ -0.74
NUP88-211ENST00000575976 ERICH6Q7L0X2 663 aa10.42□□□□□ -0.74
NUP88-211ENST00000575976 PAG1Q9NWQ8 432 aa10.42□□□□□ -0.74
NUP88-211ENST00000575976 RAI14Q9P0K7 980 aa10.42□□□□□ -0.74
NUP88-211ENST00000575976 LRP2BPQ9P2M1 347 aa10.42□□□□□ -0.74
NUP88-211ENST00000575976 HACL1Q9UJ83 578 aa10.42□□□□□ -0.74
NUP88-211ENST00000575976 HDAC9Q9UKV0 1011 aa10.42□□□□□ -0.74
NUP88-211ENST00000575976 SUGT1Q9Y2Z0 365 aa10.42□□□□□ -0.74
NUP88-211ENST00000575976 AKAP11Q9UKA4 1901 aa10.42□□□□□ -0.74
NUP88-211ENST00000575976 AOX1Q06278 1338 aa10.41□□□□□ -0.74
NUP88-211ENST00000575976 IQCA1LA6NCM1 817 aa10.41□□□□□ -0.74
NUP88-211ENST00000575976 EGFRP00533 1210 aa10.41□□□□□ -0.74
NUP88-211ENST00000575976 EPHX2P34913 555 aa10.41□□□□□ -0.74
NUP88-211ENST00000575976 TTF1Q15361 905 aaPredicted RBP10.41□□□□□ -0.74
NUP88-211ENST00000575976 SAMD7Q7Z3H4 446 aa10.41□□□□□ -0.74
NUP88-211ENST00000575976 OGFOD1Q8N543 542 aa10.41□□□□□ -0.74
NUP88-211ENST00000575976 TAF1DQ9H5J8 278 aaPredicted RBP10.41□□□□□ -0.74
NUP88-211ENST00000575976 PCDHAC2Q9Y5I4 1007 aa10.41□□□□□ -0.74
NUP88-211ENST00000575976 MYH13Q9UKX3 1938 aa10.41□□□□□ -0.74
NUP88-211ENST00000575976 IDH1O75874 414 aaKnown RBP10.4□□□□□ -0.74
NUP88-211ENST00000575976 VEGFAP15692 232 aaPredicted RBP10.4□□□□□ -0.74
NUP88-211ENST00000575976 CRKP46108 304 aa10.4□□□□□ -0.74
NUP88-211ENST00000575976 MECOMQ03112 1051 aa10.4□□□□□ -0.74
NUP88-211ENST00000575976 DIXDC1Q155Q3 683 aa10.4□□□□□ -0.74
NUP88-211ENST00000575976 CFAP100Q494V2 611 aa10.4□□□□□ -0.74
NUP88-211ENST00000575976 TBC1D10BQ4KMP7 808 aaPredicted RBP10.4□□□□□ -0.74
NUP88-211ENST00000575976 DZIP1Q86YF9 867 aaKnown RBP10.4□□□□□ -0.74
NUP88-211ENST00000575976 TRPM4Q8TD43 1214 aa10.4□□□□□ -0.74
NUP88-211ENST00000575976 ZNF384Q8TF68 577 aa10.4□□□□□ -0.74
NUP88-211ENST00000575976 NSUN4Q96CB9 384 aaKnown RBP10.4□□□□□ -0.74
NUP88-211ENST00000575976 MYOZ2Q9NPC6 264 aa10.4□□□□□ -0.74
NUP88-211ENST00000575976 ADARB2Q9NS39 739 aaKnown RBP10.4□□□□□ -0.74
NUP88-211ENST00000575976 MAST3O60307 1309 aa10.39□□□□□ -0.75
NUP88-211ENST00000575976 RGS3P49796 1198 aa10.39□□□□□ -0.75
NUP88-211ENST00000575976 MMP14P50281 582 aa10.39□□□□□ -0.75
NUP88-211ENST00000575976 RBM5P52756 815 aaKnown RBP eCLIP10.39□□□□□ -0.75
NUP88-211ENST00000575976 HIRAP54198 1017 aaPredicted RBP10.39□□□□□ -0.75
NUP88-211ENST00000575976 HDLBPQ00341 1268 aaKnown RBP10.39□□□□□ -0.75
NUP88-211ENST00000575976 MAP3K12Q12852 859 aa10.39□□□□□ -0.75
NUP88-211ENST00000575976 KIF4BQ2VIQ3 1234 aa10.39□□□□□ -0.75
NUP88-211ENST00000575976 TTC22Q5TAA0 569 aa10.39□□□□□ -0.75
NUP88-211ENST00000575976 KBTBD3Q8NAB2 608 aa10.39□□□□□ -0.75
NUP88-211ENST00000575976 MRIQ9BWK5 157 aa10.39□□□□□ -0.75
NUP88-211ENST00000575976 PRDM10Q9NQV6 1147 aa10.39□□□□□ -0.75
NUP88-211ENST00000575976 SERPINA10Q9UK55 444 aa10.39□□□□□ -0.75
NUP88-211ENST00000575976 TRIM6-TRIM34B2RNG4 842 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 WNT10BO00744 389 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 IGSF3O75054 1194 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 CHGBP05060 677 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 GSPT1P15170 499 aaKnown RBP10.38□□□□□ -0.75
NUP88-211ENST00000575976 DLGAP5Q15398 846 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 SLFNL1Q499Z3 407 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 EAPPQ56P03 285 aaPredicted RBP10.38□□□□□ -0.75
NUP88-211ENST00000575976 NAA16Q6N069 864 aaPredicted RBP10.38□□□□□ -0.75
NUP88-211ENST00000575976 HHIPL2Q6UWX4 724 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 USP50Q70EL3 339 aaPredicted RBP10.38□□□□□ -0.75
NUP88-211ENST00000575976 MAGEB6Q8N7X4 407 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 MTMR14Q8NCE2 650 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 TEKT1Q969V4 418 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 RILPL2Q969X0 211 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 EVI5LQ96CN4 794 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 FAM163AQ96GL9 167 aaPredicted RBP10.38□□□□□ -0.75
NUP88-211ENST00000575976 ZBED3Q96IU2 234 aaPredicted RBP10.38□□□□□ -0.75
NUP88-211ENST00000575976 PRMT6Q96LA8 375 aaPredicted RBP10.38□□□□□ -0.75
NUP88-211ENST00000575976 DAGLAQ9Y4D2 1042 aa10.38□□□□□ -0.75
NUP88-211ENST00000575976 GAKO14976 1311 aa10.37□□□□□ -0.75
NUP88-211ENST00000575976 ASTN2O75129 1339 aaPredicted RBP10.37□□□□□ -0.75
NUP88-211ENST00000575976 SPDYE2BA6NHP3 402 aa10.37□□□□□ -0.75
NUP88-211ENST00000575976 LDHCP07864 332 aa10.37□□□□□ -0.75
NUP88-211ENST00000575976 POTEIP0CG38 1075 aa10.37□□□□□ -0.75
NUP88-211ENST00000575976 POTEJP0CG39 1038 aa10.37□□□□□ -0.75
NUP88-211ENST00000575976 SPDYE6P0CI01 402 aa10.37□□□□□ -0.75
NUP88-211ENST00000575976 PDE6AP16499 860 aa10.37□□□□□ -0.75
NUP88-211ENST00000575976 CYP7A1P22680 504 aa10.37□□□□□ -0.75
NUP88-211ENST00000575976 ADD2P35612 726 aa10.37□□□□□ -0.75
NUP88-211ENST00000575976 GSTO1P78417 241 aa10.37□□□□□ -0.75
NUP88-211ENST00000575976 NBPF9Q3BBW0 867 aa10.37□□□□□ -0.75
NUP88-211ENST00000575976 SLC9C2Q5TAH2 1124 aa10.37□□□□□ -0.75
NUP88-211ENST00000575976 APOBEC3HQ6NTF7 200 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms