RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 C2orf69Q8N8R5 385 aa16.71■□□□□ 0.27
CIITA-210ENST00000575513 TEKT1Q969V4 418 aa16.71■□□□□ 0.27
CIITA-210ENST00000575513 CDCA5Q96FF9 252 aa16.71■□□□□ 0.27
CIITA-210ENST00000575513 ZNF512BQ96KM6 892 aaPredicted RBP16.71■□□□□ 0.27
CIITA-210ENST00000575513 PPP2R3BQ9Y5P8 575 aa16.71■□□□□ 0.27
CIITA-210ENST00000575513 RAB11FIP3O75154 756 aa16.7■□□□□ 0.26
CIITA-210ENST00000575513 CCDC158Q5M9N0 1113 aa16.7■□□□□ 0.26
CIITA-210ENST00000575513 SPTY2D1Q68D10 685 aaPredicted RBP16.7■□□□□ 0.26
CIITA-210ENST00000575513 ZDHHC15Q96MV8 337 aa16.7■□□□□ 0.26
CIITA-210ENST00000575513 GBA2Q9HCG7 927 aaPredicted RBP16.7■□□□□ 0.26
CIITA-210ENST00000575513 COL1A1P02452 1464 aaPredicted RBP16.69■□□□□ 0.26
CIITA-210ENST00000575513 IGSF3O75054 1194 aa16.69■□□□□ 0.26
CIITA-210ENST00000575513 LDHBP07195 334 aaKnown RBP16.69■□□□□ 0.26
CIITA-210ENST00000575513 TNFAIP1Q13829 316 aa16.69■□□□□ 0.26
CIITA-210ENST00000575513 SPDYE2Q495Y8 402 aa16.69■□□□□ 0.26
CIITA-210ENST00000575513 DLK2Q6UY11 383 aa16.69■□□□□ 0.26
CIITA-210ENST00000575513 DEFB129Q9H1M3 183 aa16.69■□□□□ 0.26
CIITA-210ENST00000575513 ZNF408Q9H9D4 720 aa16.69■□□□□ 0.26
CIITA-210ENST00000575513 MKRN1Q9UHC7 482 aaKnown RBP16.69■□□□□ 0.26
CIITA-210ENST00000575513 EXOC6BQ9Y2D4 811 aa16.69■□□□□ 0.26
CIITA-210ENST00000575513 PCDHAC2Q9Y5I4 1007 aa16.69■□□□□ 0.26
CIITA-210ENST00000575513 ECE1P42892 770 aa16.68■□□□□ 0.26
CIITA-210ENST00000575513 VEGFBP49765 207 aa16.68■□□□□ 0.26
CIITA-210ENST00000575513 SPATA5Q8NB90 893 aa16.68■□□□□ 0.26
CIITA-210ENST00000575513 RHPN1Q8TCX5 695 aa16.68■□□□□ 0.26
CIITA-210ENST00000575513 EAF2Q96CJ1 260 aaPredicted RBP16.68■□□□□ 0.26
CIITA-210ENST00000575513 KIF1BPQ96EK5 621 aa16.68■□□□□ 0.26
CIITA-210ENST00000575513 HMG20BQ9P0W2 317 aa16.68■□□□□ 0.26
CIITA-210ENST00000575513 ARAP2Q8WZ64 1704 aa16.67■□□□□ 0.26
CIITA-210ENST00000575513 TRPM7Q96QT4 1865 aa16.67■□□□□ 0.26
CIITA-210ENST00000575513 NF2P35240 595 aa16.67■□□□□ 0.26
CIITA-210ENST00000575513 AAMPQ13685 434 aa16.67■□□□□ 0.26
CIITA-210ENST00000575513 FKBP1CQ5VVH2 108 aa16.67■□□□□ 0.26
CIITA-210ENST00000575513 APOBEC3HQ6NTF7 200 aaKnown RBP16.67■□□□□ 0.26
CIITA-210ENST00000575513 SLF2Q8IX21 1173 aa16.67■□□□□ 0.26
CIITA-210ENST00000575513 DBNDD2Q9BQY9 259 aa16.67■□□□□ 0.26
CIITA-210ENST00000575513 ZNF70Q9UC06 446 aaPredicted RBP16.67■□□□□ 0.26
CIITA-210ENST00000575513 POLR2AP24928 1970 aaKnown RBP16.67■□□□□ 0.26
CIITA-210ENST00000575513 CLRN2A0PK11 232 aa16.66■□□□□ 0.26
CIITA-210ENST00000575513 PRDX5P30044 214 aa16.66■□□□□ 0.26
CIITA-210ENST00000575513 HUNKP57058 714 aa16.66■□□□□ 0.26
CIITA-210ENST00000575513 TTC39AQ5SRH9 613 aa16.66■□□□□ 0.26
CIITA-210ENST00000575513 FAM163AQ96GL9 167 aaPredicted RBP16.66■□□□□ 0.26
CIITA-210ENST00000575513 TDRD3Q9H7E2 651 aaKnown RBP16.66■□□□□ 0.26
CIITA-210ENST00000575513 DBNLQ9UJU6 430 aaKnown RBP16.66■□□□□ 0.26
CIITA-210ENST00000575513 WDR33Q9C0J8 1336 aaKnown RBP16.66■□□□□ 0.26
CIITA-210ENST00000575513 MCAMP43121 646 aa16.65■□□□□ 0.26
CIITA-210ENST00000575513 TNNI2P48788 182 aa16.65■□□□□ 0.26
CIITA-210ENST00000575513 SUPT20HL1Q3ZLR7 823 aa16.65■□□□□ 0.26
CIITA-210ENST00000575513 CLASRPQ8N2M8 674 aaKnown RBP16.65■□□□□ 0.26
CIITA-210ENST00000575513 VEZTQ9HBM0 779 aa16.65■□□□□ 0.26
CIITA-210ENST00000575513 MAP2K2P36507 400 aa16.64■□□□□ 0.25
CIITA-210ENST00000575513 RASA3Q14644 834 aa16.64■□□□□ 0.25
CIITA-210ENST00000575513 ERICH6Q7L0X2 663 aa16.64■□□□□ 0.25
CIITA-210ENST00000575513 CCDC102AQ96A19 550 aa16.64■□□□□ 0.25
CIITA-210ENST00000575513 CAPNS2Q96L46 248 aa16.64■□□□□ 0.25
CIITA-210ENST00000575513 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
CIITA-210ENST00000575513 TMOD2Q9NZR1 351 aa16.64■□□□□ 0.25
CIITA-210ENST00000575513 ABCF2Q9UG63 623 aa16.64■□□□□ 0.25
CIITA-210ENST00000575513 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
CIITA-210ENST00000575513 DAGLAQ9Y4D2 1042 aa16.64■□□□□ 0.25
CIITA-210ENST00000575513 AOX1Q06278 1338 aa16.64■□□□□ 0.25
CIITA-210ENST00000575513 UNCXA6NJT0 531 aa16.63■□□□□ 0.25
CIITA-210ENST00000575513 PRAMEF18Q5VWM3 479 aa16.63■□□□□ 0.25
CIITA-210ENST00000575513 RGMBQ6NW40 437 aa16.63■□□□□ 0.25
CIITA-210ENST00000575513 FAM83AQ86UY5 434 aa16.63■□□□□ 0.25
CIITA-210ENST00000575513 AACSQ86V21 672 aa16.63■□□□□ 0.25
CIITA-210ENST00000575513 DCTPP1Q9H773 170 aa16.63■□□□□ 0.25
CIITA-210ENST00000575513 GAKO14976 1311 aa16.63■□□□□ 0.25
CIITA-210ENST00000575513 LDHCP07864 332 aa16.62■□□□□ 0.25
CIITA-210ENST00000575513 GSTO1P78417 241 aa16.62■□□□□ 0.25
CIITA-210ENST00000575513 DIXDC1Q155Q3 683 aa16.62■□□□□ 0.25
CIITA-210ENST00000575513 MAP3K11Q16584 847 aa16.62■□□□□ 0.25
CIITA-210ENST00000575513 CYP4F22Q6NT55 531 aa16.62■□□□□ 0.25
CIITA-210ENST00000575513 ARMC9Q7Z3E5 817 aa16.62■□□□□ 0.25
CIITA-210ENST00000575513 DZIP1Q86YF9 867 aaKnown RBP16.62■□□□□ 0.25
CIITA-210ENST00000575513 PCNTO95613 3336 aa16.62■□□□□ 0.25
CIITA-210ENST00000575513 PPP1R12BO60237 982 aaPredicted RBP16.61■□□□□ 0.25
CIITA-210ENST00000575513 MAP4K4O95819 1239 aaPredicted RBP16.61■□□□□ 0.25
CIITA-210ENST00000575513 IFIT2P09913 472 aaKnown RBP16.61■□□□□ 0.25
CIITA-210ENST00000575513 MAP2K1Q02750 393 aaPredicted RBP16.61■□□□□ 0.25
CIITA-210ENST00000575513 MECOMQ03112 1051 aa16.61■□□□□ 0.25
CIITA-210ENST00000575513 TMED8Q6PL24 325 aaPredicted RBP16.61■□□□□ 0.25
CIITA-210ENST00000575513 PI16Q6UXB8 463 aa16.61■□□□□ 0.25
CIITA-210ENST00000575513 PAXIP1Q6ZW49 1069 aaPredicted RBP16.61■□□□□ 0.25
CIITA-210ENST00000575513 NSUN4Q96CB9 384 aaKnown RBP16.61■□□□□ 0.25
CIITA-210ENST00000575513 LRRCC1Q9C099 1032 aa16.61■□□□□ 0.25
CIITA-210ENST00000575513 IL1RAPL2Q9NP60 686 aa16.61■□□□□ 0.25
CIITA-210ENST00000575513 TLR7Q9NYK1 1049 aaKnown RBP16.61■□□□□ 0.25
CIITA-210ENST00000575513 TCP10L2B9ZVM9 353 aa16.6■□□□□ 0.25
CIITA-210ENST00000575513 CYP2E1P05181 493 aaPredicted RBP16.6■□□□□ 0.25
CIITA-210ENST00000575513 NOGQ13253 232 aa16.6■□□□□ 0.25
CIITA-210ENST00000575513 LDLRAD1Q5T700 205 aa16.6■□□□□ 0.25
CIITA-210ENST00000575513 CDC42EP5Q6NZY7 148 aa16.6■□□□□ 0.25
CIITA-210ENST00000575513 TBC1D9Q6ZT07 1266 aa16.6■□□□□ 0.25
CIITA-210ENST00000575513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.6■□□□□ 0.25
CIITA-210ENST00000575513 HOOK2Q96ED9 719 aa16.6■□□□□ 0.25
CIITA-210ENST00000575513 TEPSINQ96N21 525 aa16.6■□□□□ 0.25
CIITA-210ENST00000575513 CRBNQ96SW2 442 aa16.6■□□□□ 0.25
CIITA-210ENST00000575513 LRP2BPQ9P2M1 347 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms