RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 BCAMP50895 628 aa19.1■□□□□ 0.65
CTNS-209ENST00000574776 IFNL1Q8IU54 200 aa19.1■□□□□ 0.65
CTNS-209ENST00000574776 CFHR5Q9BXR6 569 aa19.1■□□□□ 0.65
CTNS-209ENST00000574776 TCP10L2B9ZVM9 353 aa19.09■□□□□ 0.65
CTNS-209ENST00000574776 ALDH1A1P00352 501 aa19.09■□□□□ 0.65
CTNS-209ENST00000574776 TNFAIP1Q13829 316 aa19.09■□□□□ 0.65
CTNS-209ENST00000574776 ALDH1L2Q3SY69 923 aa19.08■□□□□ 0.64
CTNS-209ENST00000574776 CDAN1Q8IWY9 1227 aa19.08■□□□□ 0.64
CTNS-209ENST00000574776 ANKRD13AQ8IZ07 590 aa19.08■□□□□ 0.64
CTNS-209ENST00000574776 TBC1D22AQ8WUA7 517 aa19.08■□□□□ 0.64
CTNS-209ENST00000574776 TEPSINQ96N21 525 aa19.08■□□□□ 0.64
CTNS-209ENST00000574776 SMC4Q9NTJ3 1288 aa19.08■□□□□ 0.64
CTNS-209ENST00000574776 IGF2BP3O00425 579 aaKnown RBP eCLIP19.07■□□□□ 0.64
CTNS-209ENST00000574776 GJA5P36382 358 aa19.07■□□□□ 0.64
CTNS-209ENST00000574776 TMEM39BQ9GZU3 492 aa19.07■□□□□ 0.64
CTNS-209ENST00000574776 EYA2O00167 538 aa19.06■□□□□ 0.64
CTNS-209ENST00000574776 IFIT1P09914 478 aaKnown RBP19.06■□□□□ 0.64
CTNS-209ENST00000574776 FGFR2P21802 821 aa19.06■□□□□ 0.64
CTNS-209ENST00000574776 RFX5P48382 616 aaPredicted RBP19.06■□□□□ 0.64
CTNS-209ENST00000574776 HDLBPQ00341 1268 aaKnown RBP19.06■□□□□ 0.64
CTNS-209ENST00000574776 TRMT2AQ8IZ69 625 aaKnown RBP19.06■□□□□ 0.64
CTNS-209ENST00000574776 ELP3Q9H9T3 547 aa19.06■□□□□ 0.64
CTNS-209ENST00000574776 TNNI2P48788 182 aa19.05■□□□□ 0.64
CTNS-209ENST00000574776 CACNB3P54284 484 aa19.05■□□□□ 0.64
CTNS-209ENST00000574776 PUM3Q15397 648 aaKnown RBP19.05■□□□□ 0.64
CTNS-209ENST00000574776 TEKT1Q969V4 418 aa19.05■□□□□ 0.64
CTNS-209ENST00000574776 NOB1Q9ULX3 412 aaKnown RBP19.05■□□□□ 0.64
CTNS-209ENST00000574776 FBXO46Q6PJ61 603 aaPredicted RBP19.04■□□□□ 0.64
CTNS-209ENST00000574776 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.04■□□□□ 0.64
CTNS-209ENST00000574776 OPTNQ96CV9 577 aa19.04■□□□□ 0.64
CTNS-209ENST00000574776 PTPN18Q99952 460 aa19.04■□□□□ 0.64
CTNS-209ENST00000574776 MRIQ9BWK5 157 aa19.04■□□□□ 0.64
CTNS-209ENST00000574776 TNRC18O15417 2968 aaPredicted RBP19.03■□□□□ 0.64
CTNS-209ENST00000574776 MAP3K9P80192 1104 aa19.03■□□□□ 0.64
CTNS-209ENST00000574776 OTUD7BQ6GQQ9 843 aa19.03■□□□□ 0.64
CTNS-209ENST00000574776 ATG9AQ7Z3C6 839 aa19.03■□□□□ 0.64
CTNS-209ENST00000574776 ZDHHC15Q96MV8 337 aa19.03■□□□□ 0.64
CTNS-209ENST00000574776 UBTFL1P0CB47 393 aaPredicted RBP19.02■□□□□ 0.64
CTNS-209ENST00000574776 SLC5A1P13866 664 aa19.02■□□□□ 0.64
CTNS-209ENST00000574776 APOBEC3HQ6NTF7 200 aaKnown RBP19.02■□□□□ 0.64
CTNS-209ENST00000574776 CNKSR2Q8WXI2 1034 aa19.02■□□□□ 0.64
CTNS-209ENST00000574776 LPIN2Q92539 896 aa19.02■□□□□ 0.64
CTNS-209ENST00000574776 SIL1Q9H173 461 aa19.02■□□□□ 0.64
CTNS-209ENST00000574776 ARAP2Q8WZ64 1704 aa19.02■□□□□ 0.63
CTNS-209ENST00000574776 KIF16BQ96L93 1317 aa19.01■□□□□ 0.63
CTNS-209ENST00000574776 TESPA1A2RU30 521 aaPredicted RBP19.01■□□□□ 0.63
CTNS-209ENST00000574776 CRHR2Q13324 411 aa19.01■□□□□ 0.63
CTNS-209ENST00000574776 SUGT1Q9Y2Z0 365 aa19.01■□□□□ 0.63
CTNS-209ENST00000574776 PDE4DIPQ5VU43 2346 aa19.01■□□□□ 0.63
CTNS-209ENST00000574776 VGLL4Q14135 290 aa19■□□□□ 0.63
CTNS-209ENST00000574776 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19■□□□□ 0.63
CTNS-209ENST00000574776 MS4A4AQ96JQ5 239 aa19■□□□□ 0.63
CTNS-209ENST00000574776 TMOD2Q9NZR1 351 aa19■□□□□ 0.63
CTNS-209ENST00000574776 TRIM17Q9Y577 477 aa19■□□□□ 0.63
CTNS-209ENST00000574776 CT47B1P0C2W7 299 aaPredicted RBP18.99■□□□□ 0.63
CTNS-209ENST00000574776 HHIPL2Q6UWX4 724 aa18.99■□□□□ 0.63
CTNS-209ENST00000574776 OTOP1Q7RTM1 612 aa18.99■□□□□ 0.63
CTNS-209ENST00000574776 WDR66Q8TBY9 1149 aa18.99■□□□□ 0.63
CTNS-209ENST00000574776 API5Q9BZZ5 524 aaKnown RBP18.99■□□□□ 0.63
CTNS-209ENST00000574776 CEP126Q9P2H0 1117 aa18.99■□□□□ 0.63
CTNS-209ENST00000574776 CSADQ9Y600 493 aa18.99■□□□□ 0.63
CTNS-209ENST00000574776 MAST3O60307 1309 aa18.99■□□□□ 0.63
CTNS-209ENST00000574776 FKBP1CQ5VVH2 108 aa18.98■□□□□ 0.63
CTNS-209ENST00000574776 FAM83AQ86UY5 434 aa18.98■□□□□ 0.63
CTNS-209ENST00000574776 CD99L2Q8TCZ2 262 aa18.98■□□□□ 0.63
CTNS-209ENST00000574776 OTUD5Q96G74 571 aa18.98■□□□□ 0.63
CTNS-209ENST00000574776 ERO1AQ96HE7 468 aa18.98■□□□□ 0.63
CTNS-209ENST00000574776 LRRFIP2Q9Y608 721 aaKnown RBP18.98■□□□□ 0.63
CTNS-209ENST00000574776 OTOFQ9HC10 1997 aa18.98■□□□□ 0.63
CTNS-209ENST00000574776 LAMB1P07942 1786 aa18.97■□□□□ 0.63
CTNS-209ENST00000574776 CCL15-CCL14A0A0B4J2E2 113 aa18.97■□□□□ 0.63
CTNS-209ENST00000574776 CIAO1O76071 339 aa18.97■□□□□ 0.63
CTNS-209ENST00000574776 GTF2A2P52657 109 aa18.97■□□□□ 0.63
CTNS-209ENST00000574776 CCL15Q16663 113 aa18.97■□□□□ 0.63
CTNS-209ENST00000574776 ATP2B3Q16720 1220 aa18.97■□□□□ 0.63
CTNS-209ENST00000574776 BRI3BPQ8WY22 251 aa18.97■□□□□ 0.63
CTNS-209ENST00000574776 ZKSCAN4Q969J2 545 aaPredicted RBP18.97■□□□□ 0.63
CTNS-209ENST00000574776 FBXO3Q9UK99 471 aa18.97■□□□□ 0.63
CTNS-209ENST00000574776 PA2G4Q9UQ80 394 aaKnown RBP18.97■□□□□ 0.63
CTNS-209ENST00000574776 SP3Q02447 781 aa18.96■□□□□ 0.63
CTNS-209ENST00000574776 GNL3LQ9NVN8 582 aaKnown RBP18.96■□□□□ 0.63
CTNS-209ENST00000574776 HDAC5Q9UQL6 1122 aa18.96■□□□□ 0.63
CTNS-209ENST00000574776 IL15P40933 162 aaPredicted RBP18.95■□□□□ 0.62
CTNS-209ENST00000574776 RARSP54136 660 aaKnown RBP18.95■□□□□ 0.62
CTNS-209ENST00000574776 DIXDC1Q155Q3 683 aa18.95■□□□□ 0.62
CTNS-209ENST00000574776 MIGA2Q7L4E1 593 aa18.95■□□□□ 0.62
CTNS-209ENST00000574776 HOOK2Q96ED9 719 aa18.95■□□□□ 0.62
CTNS-209ENST00000574776 WRNIP1Q96S55 665 aa18.95■□□□□ 0.62
CTNS-209ENST00000574776 MEIS3Q99687 375 aa18.95■□□□□ 0.62
CTNS-209ENST00000574776 SNCAIPQ9Y6H5 919 aa18.95■□□□□ 0.62
CTNS-209ENST00000574776 SPDYE5A6NIY4 337 aa18.94■□□□□ 0.62
CTNS-209ENST00000574776 CCER2I3L3R5 266 aa18.94■□□□□ 0.62
CTNS-209ENST00000574776 PRDX5P30044 214 aa18.94■□□□□ 0.62
CTNS-209ENST00000574776 PHKA1P46020 1223 aa18.94■□□□□ 0.62
CTNS-209ENST00000574776 CAP1Q01518 475 aa18.94■□□□□ 0.62
CTNS-209ENST00000574776 TAF1CQ15572 869 aaPredicted RBP18.94■□□□□ 0.62
CTNS-209ENST00000574776 CDC42EP5Q6NZY7 148 aa18.94■□□□□ 0.62
CTNS-209ENST00000574776 ERO1BQ86YB8 467 aa18.94■□□□□ 0.62
CTNS-209ENST00000574776 FAM43AQ8N2R8 423 aa18.94■□□□□ 0.62
CTNS-209ENST00000574776 FAM151AQ8WW52 585 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms