RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 GRIK5Q16478 980 aa29.73■■■□□ 2.35
LITAF-213ENST00000574701 KRT26Q7Z3Y9 468 aa29.73■■■□□ 2.35
LITAF-213ENST00000574701 TEKT1Q969V4 418 aa29.73■■■□□ 2.35
LITAF-213ENST00000574701 ZNF512BQ96KM6 892 aaPredicted RBP29.73■■■□□ 2.35
LITAF-213ENST00000574701 GLIS2Q9BZE0 524 aaPredicted RBP29.73■■■□□ 2.35
LITAF-213ENST00000574701 ABCF2Q9UG63 623 aa29.73■■■□□ 2.35
LITAF-213ENST00000574701 ASTN2O75129 1339 aaPredicted RBP29.72■■■□□ 2.35
LITAF-213ENST00000574701 APLP1P51693 650 aa29.72■■■□□ 2.35
LITAF-213ENST00000574701 SPTY2D1Q68D10 685 aaPredicted RBP29.72■■■□□ 2.35
LITAF-213ENST00000574701 ZBED3Q96IU2 234 aaPredicted RBP29.72■■■□□ 2.35
LITAF-213ENST00000574701 SPDYE2BA6NHP3 402 aa29.71■■■□□ 2.35
LITAF-213ENST00000574701 SPDYE6P0CI01 402 aa29.71■■■□□ 2.35
LITAF-213ENST00000574701 PRDX5P30044 214 aa29.71■■■□□ 2.35
LITAF-213ENST00000574701 HDAC1Q13547 482 aaPredicted RBP29.71■■■□□ 2.35
LITAF-213ENST00000574701 POLR2AP24928 1970 aaKnown RBP29.71■■■□□ 2.35
LITAF-213ENST00000574701 TRPM7Q96QT4 1865 aa29.7■■■□□ 2.35
LITAF-213ENST00000574701 PI16Q6UXB8 463 aa29.7■■■□□ 2.35
LITAF-213ENST00000574701 USP48Q86UV5 1035 aa29.7■■■□□ 2.35
LITAF-213ENST00000574701 AKAP11Q9UKA4 1901 aa29.69■■■□□ 2.34
LITAF-213ENST00000574701 ERICH6Q7L0X2 663 aa29.69■■■□□ 2.34
LITAF-213ENST00000574701 DZIP1Q86YF9 867 aaKnown RBP29.69■■■□□ 2.34
LITAF-213ENST00000574701 APOBEC3FQ8IUX4 373 aaKnown RBP29.69■■■□□ 2.34
LITAF-213ENST00000574701 ZBTB47Q9UFB7 747 aaPredicted RBP29.69■■■□□ 2.34
LITAF-213ENST00000574701 TRAF5O00463 557 aa29.68■■■□□ 2.34
LITAF-213ENST00000574701 SMARCA5O60264 1052 aaPredicted RBP29.68■■■□□ 2.34
LITAF-213ENST00000574701 MRIQ9BWK5 157 aa29.68■■■□□ 2.34
LITAF-213ENST00000574701 RWDD1Q9H446 243 aaPredicted RBP29.68■■■□□ 2.34
LITAF-213ENST00000574701 PCDHAC2Q9Y5I4 1007 aa29.68■■■□□ 2.34
LITAF-213ENST00000574701 ADM5C9JUS6 153 aa29.67■■■□□ 2.34
LITAF-213ENST00000574701 GCC1Q96CN9 775 aa29.67■■■□□ 2.34
LITAF-213ENST00000574701 PRMT6Q96LA8 375 aaPredicted RBP29.67■■■□□ 2.34
LITAF-213ENST00000574701 SNRKQ9NRH2 765 aa29.67■■■□□ 2.34
LITAF-213ENST00000574701 HHIPL2Q6UWX4 724 aa29.66■■■□□ 2.34
LITAF-213ENST00000574701 SLF2Q8IX21 1173 aa29.66■■■□□ 2.34
LITAF-213ENST00000574701 MAST2Q6P0Q8 1798 aa29.66■■■□□ 2.34
LITAF-213ENST00000574701 ZDHHC15Q96MV8 337 aa29.65■■■□□ 2.34
LITAF-213ENST00000574701 VEZTQ9HBM0 779 aa29.65■■■□□ 2.34
LITAF-213ENST00000574701 CLRN2A0PK11 232 aa29.64■■■□□ 2.34
LITAF-213ENST00000574701 TMEM88BA6NKF7 163 aa29.64■■■□□ 2.34
LITAF-213ENST00000574701 ZAP70P43403 619 aa29.64■■■□□ 2.34
LITAF-213ENST00000574701 RAI14Q9P0K7 980 aa29.64■■■□□ 2.34
LITAF-213ENST00000574701 LRP2BPQ9P2M1 347 aa29.64■■■□□ 2.34
LITAF-213ENST00000574701 MYH2Q9UKX2 1941 aa29.64■■■□□ 2.34
LITAF-213ENST00000574701 DIXDC1Q155Q3 683 aa29.63■■■□□ 2.33
LITAF-213ENST00000574701 TBC1D9Q6ZT07 1266 aa29.63■■■□□ 2.33
LITAF-213ENST00000574701 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.63■■■□□ 2.33
LITAF-213ENST00000574701 GPATCH3Q96I76 525 aa29.63■■■□□ 2.33
LITAF-213ENST00000574701 ZNF408Q9H9D4 720 aa29.63■■■□□ 2.33
LITAF-213ENST00000574701 CREBZFQ9NS37 354 aa29.63■■■□□ 2.33
LITAF-213ENST00000574701 TMOD2Q9NZR1 351 aa29.63■■■□□ 2.33
LITAF-213ENST00000574701 CELF2O95319 508 aaKnown RBP29.62■■■□□ 2.33
LITAF-213ENST00000574701 CENPBP07199 599 aaPredicted RBP29.62■■■□□ 2.33
LITAF-213ENST00000574701 GSTO1P78417 241 aa29.62■■■□□ 2.33
LITAF-213ENST00000574701 FMR1Q06787 632 aaKnown RBP eCLIP29.62■■■□□ 2.33
LITAF-213ENST00000574701 SPDYE2Q495Y8 402 aa29.62■■■□□ 2.33
LITAF-213ENST00000574701 TDRD3Q9H7E2 651 aaKnown RBP29.62■■■□□ 2.33
LITAF-213ENST00000574701 TNFAIP1Q13829 316 aa29.61■■■□□ 2.33
LITAF-213ENST00000574701 ZNF70Q9UC06 446 aaPredicted RBP29.61■■■□□ 2.33
LITAF-213ENST00000574701 DAGLAQ9Y4D2 1042 aa29.61■■■□□ 2.33
LITAF-213ENST00000574701 CYP2E1P05181 493 aaPredicted RBP29.6■■■□□ 2.33
LITAF-213ENST00000574701 MECOMQ03112 1051 aa29.6■■■□□ 2.33
LITAF-213ENST00000574701 CDCA5Q96FF9 252 aa29.6■■■□□ 2.33
LITAF-213ENST00000574701 SCAF8Q9UPN6 1271 aaKnown RBP29.6■■■□□ 2.33
LITAF-213ENST00000574701 IGSF3O75054 1194 aa29.59■■■□□ 2.33
LITAF-213ENST00000574701 ANKRD45Q5TZF3 282 aa29.59■■■□□ 2.33
LITAF-213ENST00000574701 PPP2R3BQ9Y5P8 575 aa29.59■■■□□ 2.33
LITAF-213ENST00000574701 AOX1Q06278 1338 aa29.59■■■□□ 2.33
LITAF-213ENST00000574701 MROH7-TTC4A0A0A0MT08 1334 aa29.58■■■□□ 2.33
LITAF-213ENST00000574701 LDHCP07864 332 aa29.58■■■□□ 2.33
LITAF-213ENST00000574701 TTF1Q15361 905 aaPredicted RBP29.58■■■□□ 2.33
LITAF-213ENST00000574701 APOBEC3HQ6NTF7 200 aaKnown RBP29.58■■■□□ 2.33
LITAF-213ENST00000574701 DNAJC2Q99543 621 aaKnown RBP29.58■■■□□ 2.33
LITAF-213ENST00000574701 DOCK2Q92608 1830 aa29.57■■■□□ 2.32
LITAF-213ENST00000574701 GAKO14976 1311 aa29.57■■■□□ 2.32
LITAF-213ENST00000574701 ATP5JP18859 108 aa29.57■■■□□ 2.32
LITAF-213ENST00000574701 TNNI2P48788 182 aa29.57■■■□□ 2.32
LITAF-213ENST00000574701 DLK2Q6UY11 383 aa29.57■■■□□ 2.32
LITAF-213ENST00000574701 NSUN4Q96CB9 384 aaKnown RBP29.57■■■□□ 2.32
LITAF-213ENST00000574701 ECHDC1Q9NTX5 307 aa29.57■■■□□ 2.32
LITAF-213ENST00000574701 NF2P35240 595 aa29.56■■■□□ 2.32
LITAF-213ENST00000574701 HTRA3P83110 453 aa29.56■■■□□ 2.32
LITAF-213ENST00000574701 DEFB129Q9H1M3 183 aa29.56■■■□□ 2.32
LITAF-213ENST00000574701 PIH1D3Q9NQM4 214 aaKnown RBP29.56■■■□□ 2.32
LITAF-213ENST00000574701 ABT1Q9ULW3 272 aaKnown RBP29.56■■■□□ 2.32
LITAF-213ENST00000574701 NDUFB9Q9Y6M9 179 aa29.56■■■□□ 2.32
LITAF-213ENST00000574701 MYO5AQ9Y4I1 1855 aaKnown RBP29.56■■■□□ 2.32
LITAF-213ENST00000574701 IDH1O75874 414 aaKnown RBP29.55■■■□□ 2.32
LITAF-213ENST00000574701 NAA16Q6N069 864 aaPredicted RBP29.55■■■□□ 2.32
LITAF-213ENST00000574701 BOLA2Q9H3K6 86 aa29.55■■■□□ 2.32
LITAF-213ENST00000574701 TCP10L2B9ZVM9 353 aa29.54■■■□□ 2.32
LITAF-213ENST00000574701 IGHDP01880 384 aa29.54■■■□□ 2.32
LITAF-213ENST00000574701 CST9Q5W186 159 aa29.54■■■□□ 2.32
LITAF-213ENST00000574701 SMC5Q8IY18 1101 aa29.54■■■□□ 2.32
LITAF-213ENST00000574701 FAM163AQ96GL9 167 aaPredicted RBP29.54■■■□□ 2.32
LITAF-213ENST00000574701 NOL10Q9BSC4 688 aaKnown RBP29.54■■■□□ 2.32
LITAF-213ENST00000574701 BTDP43251 543 aa29.53■■■□□ 2.32
LITAF-213ENST00000574701 MAP3K12Q12852 859 aa29.53■■■□□ 2.32
LITAF-213ENST00000574701 GBA2Q9HCG7 927 aaPredicted RBP29.53■■■□□ 2.32
LITAF-213ENST00000574701 GOLIM4O00461 696 aa29.52■■■□□ 2.32
LITAF-213ENST00000574701 RASA3Q14644 834 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms