RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 GPSM2P81274 684 aa12.55□□□□□ -0.4
NCBP3-203ENST00000574379 FOXO4P98177 505 aa12.55□□□□□ -0.4
NCBP3-203ENST00000574379 AGBL3Q8NEM8 1001 aa12.55□□□□□ -0.4
NCBP3-203ENST00000574379 FBXW7Q969H0 707 aa12.55□□□□□ -0.4
NCBP3-203ENST00000574379 FAM161BQ96MY7 647 aa12.55□□□□□ -0.4
NCBP3-203ENST00000574379 GREM2Q9H772 168 aa12.55□□□□□ -0.4
NCBP3-203ENST00000574379 C9orf78Q9NZ63 289 aaPredicted RBP12.55□□□□□ -0.4
NCBP3-203ENST00000574379 BIN2Q9UBW5 565 aaPredicted RBP12.55□□□□□ -0.4
NCBP3-203ENST00000574379 TMEM265A0A087WTH1 108 aa12.54□□□□□ -0.4
NCBP3-203ENST00000574379 FARP2O94887 1054 aaPredicted RBP12.54□□□□□ -0.4
NCBP3-203ENST00000574379 NBPF7P0C2Y1 421 aaPredicted RBP12.54□□□□□ -0.4
NCBP3-203ENST00000574379 BCAMP50895 628 aa12.54□□□□□ -0.4
NCBP3-203ENST00000574379 EPHA10Q5JZY3 1008 aa12.54□□□□□ -0.4
NCBP3-203ENST00000574379 KAZALD1Q96I82 304 aa12.54□□□□□ -0.4
NCBP3-203ENST00000574379 CLMNQ96JQ2 1002 aa12.54□□□□□ -0.4
NCBP3-203ENST00000574379 IRS2Q9Y4H2 1338 aa12.54□□□□□ -0.4
NCBP3-203ENST00000574379 SCN9AQ15858 1988 aa12.54□□□□□ -0.4
NCBP3-203ENST00000574379 ZNF646O15015 1829 aaPredicted RBP12.53□□□□□ -0.4
NCBP3-203ENST00000574379 CCT4P50991 539 aaKnown RBP12.53□□□□□ -0.4
NCBP3-203ENST00000574379 TAF1CQ15572 869 aaPredicted RBP12.53□□□□□ -0.4
NCBP3-203ENST00000574379 LDLRAD1Q5T700 205 aa12.53□□□□□ -0.4
NCBP3-203ENST00000574379 ANKRD18AQ8IVF6 992 aa12.53□□□□□ -0.4
NCBP3-203ENST00000574379 SUCLG2Q96I99 432 aa12.53□□□□□ -0.4
NCBP3-203ENST00000574379 CDC5LQ99459 802 aaKnown RBP12.53□□□□□ -0.4
NCBP3-203ENST00000574379 USP44Q9H0E7 712 aa12.53□□□□□ -0.4
NCBP3-203ENST00000574379 RNF208Q9H0X6 261 aa12.53□□□□□ -0.4
NCBP3-203ENST00000574379 ZFYVE28Q9HCC9 887 aa12.53□□□□□ -0.4
NCBP3-203ENST00000574379 IPO8O15397 1037 aaKnown RBP12.52□□□□□ -0.41
NCBP3-203ENST00000574379 SASH1O94885 1247 aa12.52□□□□□ -0.41
NCBP3-203ENST00000574379 PRKAR2AP13861 404 aaKnown RBP12.52□□□□□ -0.41
NCBP3-203ENST00000574379 TRIM27P14373 513 aa12.52□□□□□ -0.41
NCBP3-203ENST00000574379 ITGA6P23229 1130 aa12.52□□□□□ -0.41
NCBP3-203ENST00000574379 ATF7IPQ6VMQ6 1270 aa12.52□□□□□ -0.41
NCBP3-203ENST00000574379 OGFOD1Q8N543 542 aa12.52□□□□□ -0.41
NCBP3-203ENST00000574379 ARHGAP39Q9C0H5 1083 aa12.52□□□□□ -0.41
NCBP3-203ENST00000574379 TNNQ9UQP3 1299 aa12.52□□□□□ -0.41
NCBP3-203ENST00000574379 SPTBN5Q9NRC6 3674 aaKnown RBP12.52□□□□□ -0.41
NCBP3-203ENST00000574379 PPP1R12BO60237 982 aaPredicted RBP12.51□□□□□ -0.41
NCBP3-203ENST00000574379 UFL1O94874 794 aa12.51□□□□□ -0.41
NCBP3-203ENST00000574379 GJA8P48165 433 aa12.51□□□□□ -0.41
NCBP3-203ENST00000574379 LMBR1LQ6UX01 489 aa12.51□□□□□ -0.41
NCBP3-203ENST00000574379 TBC1D16Q8TBP0 767 aa12.51□□□□□ -0.41
NCBP3-203ENST00000574379 FRAT1Q92837 279 aaPredicted RBP12.51□□□□□ -0.41
NCBP3-203ENST00000574379 ANKIB1Q9P2G1 1089 aa12.51□□□□□ -0.41
NCBP3-203ENST00000574379 ZMYND8Q9ULU4 1186 aaPredicted RBP12.51□□□□□ -0.41
NCBP3-203ENST00000574379 WDHD1O75717 1129 aaPredicted RBP12.5□□□□□ -0.41
NCBP3-203ENST00000574379 CCL5P13501 91 aa12.5□□□□□ -0.41
NCBP3-203ENST00000574379 RABL6Q3YEC7 729 aaPredicted RBP12.5□□□□□ -0.41
NCBP3-203ENST00000574379 ZKSCAN2Q63HK3 967 aa12.5□□□□□ -0.41
NCBP3-203ENST00000574379 APOBEC3FQ8IUX4 373 aaKnown RBP12.5□□□□□ -0.41
NCBP3-203ENST00000574379 C7orf61Q8IZ16 206 aa12.5□□□□□ -0.41
NCBP3-203ENST00000574379 ANKRD44Q8N8A2 993 aa12.5□□□□□ -0.41
NCBP3-203ENST00000574379 RAET1EQ8TD07 263 aa12.5□□□□□ -0.41
NCBP3-203ENST00000574379 SYMPKQ92797 1274 aaKnown RBP12.5□□□□□ -0.41
NCBP3-203ENST00000574379 PTPN18Q99952 460 aa12.5□□□□□ -0.41
NCBP3-203ENST00000574379 BSDC1Q9NW68 430 aaPredicted RBP12.5□□□□□ -0.41
NCBP3-203ENST00000574379 PODXL2Q9NZ53 605 aa12.5□□□□□ -0.41
NCBP3-203ENST00000574379 ANKRD18BA2A2Z9 1011 aa12.49□□□□□ -0.41
NCBP3-203ENST00000574379 WNT10BO00744 389 aa12.49□□□□□ -0.41
NCBP3-203ENST00000574379 IGHMBP2P38935 993 aaKnown RBP12.49□□□□□ -0.41
NCBP3-203ENST00000574379 IFIT5Q13325 482 aaKnown RBP12.49□□□□□ -0.41
NCBP3-203ENST00000574379 LRIT3Q3SXY7 679 aa12.49□□□□□ -0.41
NCBP3-203ENST00000574379 BICC1Q9H694 974 aaKnown RBP12.49□□□□□ -0.41
NCBP3-203ENST00000574379 CHMP3Q9Y3E7 222 aa12.49□□□□□ -0.41
NCBP3-203ENST00000574379 MYH13Q9UKX3 1938 aa12.49□□□□□ -0.41
NCBP3-203ENST00000574379 XDHP47989 1333 aa12.48□□□□□ -0.41
NCBP3-203ENST00000574379 USP17L3A6NCW0 530 aa12.48□□□□□ -0.41
NCBP3-203ENST00000574379 USP17L4A6NCW7 530 aa12.48□□□□□ -0.41
NCBP3-203ENST00000574379 GJB1P08034 283 aa12.48□□□□□ -0.41
NCBP3-203ENST00000574379 SYN1P17600 705 aa12.48□□□□□ -0.41
NCBP3-203ENST00000574379 USP17L1Q7RTZ2 530 aa12.48□□□□□ -0.41
NCBP3-203ENST00000574379 TDHQ8IZJ6 230 aa12.48□□□□□ -0.41
NCBP3-203ENST00000574379 U2AF1L4Q8WU68 220 aaKnown RBP12.48□□□□□ -0.41
NCBP3-203ENST00000574379 CLUAP1Q96AJ1 413 aa12.48□□□□□ -0.41
NCBP3-203ENST00000574379 MEIS3Q99687 375 aa12.48□□□□□ -0.41
NCBP3-203ENST00000574379 MINPP1Q9UNW1 487 aa12.48□□□□□ -0.41
NCBP3-203ENST00000574379 ZSWIM8A7E2V4 1837 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 TFRCP02786 760 aaKnown RBP12.47□□□□□ -0.41
NCBP3-203ENST00000574379 UBTFL1P0CB47 393 aaPredicted RBP12.47□□□□□ -0.41
NCBP3-203ENST00000574379 GRK4P32298 578 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 BMP8BP34820 402 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 UBXN2AP68543 259 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 CCDC57Q2TAC2 916 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 UBE2Q1Q7Z7E8 422 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 TMEM57Q8N5G2 664 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 ZNF594Q96JF6 807 aaPredicted RBP12.47□□□□□ -0.41
NCBP3-203ENST00000574379 GUCD1Q96NT3 240 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 GDF15Q99988 308 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 MXD3Q9BW11 206 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 UBE2OQ9C0C9 1292 aaKnown RBP12.47□□□□□ -0.41
NCBP3-203ENST00000574379 ELP3Q9H9T3 547 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 GGA1Q9UJY5 639 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 RCAN3Q9UKA8 241 aa12.47□□□□□ -0.41
NCBP3-203ENST00000574379 CCL15-CCL14A0A0B4J2E2 113 aa12.46□□□□□ -0.41
NCBP3-203ENST00000574379 RLBP1P12271 317 aa12.46□□□□□ -0.41
NCBP3-203ENST00000574379 GJA5P36382 358 aa12.46□□□□□ -0.41
NCBP3-203ENST00000574379 IREB2P48200 963 aaKnown RBP12.46□□□□□ -0.41
NCBP3-203ENST00000574379 LACTBP83111 547 aaPredicted RBP12.46□□□□□ -0.41
NCBP3-203ENST00000574379 CCL15Q16663 113 aa12.46□□□□□ -0.41
NCBP3-203ENST00000574379 OPTNQ96CV9 577 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms