RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 KIF16BQ96L93 1317 aa17.92■□□□□ 0.46
TVP23A-208ENST00000573857 HTTP42858 3142 aa17.92■□□□□ 0.46
TVP23A-208ENST00000573857 MANSC4A6NHS7 340 aaPredicted RBP17.91■□□□□ 0.46
TVP23A-208ENST00000573857 USP2O75604 605 aaPredicted RBP17.91■□□□□ 0.46
TVP23A-208ENST00000573857 CT47B1P0C2W7 299 aaPredicted RBP17.91■□□□□ 0.46
TVP23A-208ENST00000573857 FGFR2P21802 821 aa17.91■□□□□ 0.46
TVP23A-208ENST00000573857 BCAMP50895 628 aa17.91■□□□□ 0.46
TVP23A-208ENST00000573857 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.91■□□□□ 0.46
TVP23A-208ENST00000573857 EYA2O00167 538 aa17.9■□□□□ 0.46
TVP23A-208ENST00000573857 ALDH1A1P00352 501 aa17.9■□□□□ 0.46
TVP23A-208ENST00000573857 INHBEP58166 350 aa17.9■□□□□ 0.46
TVP23A-208ENST00000573857 HDLBPQ00341 1268 aaKnown RBP17.9■□□□□ 0.46
TVP23A-208ENST00000573857 PKN2Q16513 984 aaKnown RBP17.9■□□□□ 0.46
TVP23A-208ENST00000573857 R3HDMLQ9H3Y0 253 aa17.9■□□□□ 0.46
TVP23A-208ENST00000573857 TCP10L2B9ZVM9 353 aa17.89■□□□□ 0.45
TVP23A-208ENST00000573857 IFIT1P09914 478 aaKnown RBP17.89■□□□□ 0.45
TVP23A-208ENST00000573857 UBTFL1P0CB47 393 aaPredicted RBP17.89■□□□□ 0.45
TVP23A-208ENST00000573857 IFNL1Q8IU54 200 aa17.89■□□□□ 0.45
TVP23A-208ENST00000573857 CDAN1Q8IWY9 1227 aa17.89■□□□□ 0.45
TVP23A-208ENST00000573857 ANKRD13AQ8IZ07 590 aa17.89■□□□□ 0.45
TVP23A-208ENST00000573857 TEPSINQ96N21 525 aa17.89■□□□□ 0.45
TVP23A-208ENST00000573857 NOB1Q9ULX3 412 aaKnown RBP17.89■□□□□ 0.45
TVP23A-208ENST00000573857 TNRC18O15417 2968 aaPredicted RBP17.89■□□□□ 0.45
TVP23A-208ENST00000573857 CCER2I3L3R5 266 aa17.88■□□□□ 0.45
TVP23A-208ENST00000573857 GJA5P36382 358 aa17.88■□□□□ 0.45
TVP23A-208ENST00000573857 DIEXFQ68CQ4 756 aaKnown RBP17.88■□□□□ 0.45
TVP23A-208ENST00000573857 TEKT1Q969V4 418 aa17.88■□□□□ 0.45
TVP23A-208ENST00000573857 TMEM39BQ9GZU3 492 aa17.88■□□□□ 0.45
TVP23A-208ENST00000573857 HPS5Q9UPZ3 1129 aa17.88■□□□□ 0.45
TVP23A-208ENST00000573857 SUGT1Q9Y2Z0 365 aa17.88■□□□□ 0.45
TVP23A-208ENST00000573857 IGF2BP3O00425 579 aaKnown RBP eCLIP17.87■□□□□ 0.45
TVP23A-208ENST00000573857 FKTNO75072 461 aa17.87■□□□□ 0.45
TVP23A-208ENST00000573857 SLC5A1P13866 664 aa17.87■□□□□ 0.45
TVP23A-208ENST00000573857 TNNI2P48788 182 aa17.87■□□□□ 0.45
TVP23A-208ENST00000573857 SOX10P56693 466 aa17.87■□□□□ 0.45
TVP23A-208ENST00000573857 ATG9AQ7Z3C6 839 aa17.87■□□□□ 0.45
TVP23A-208ENST00000573857 LPIN2Q92539 896 aa17.87■□□□□ 0.45
TVP23A-208ENST00000573857 ZDHHC15Q96MV8 337 aa17.87■□□□□ 0.45
TVP23A-208ENST00000573857 MRIQ9BWK5 157 aa17.87■□□□□ 0.45
TVP23A-208ENST00000573857 API5Q9BZZ5 524 aaKnown RBP17.87■□□□□ 0.45
TVP23A-208ENST00000573857 CENPFP49454 3210 aa17.86■□□□□ 0.45
TVP23A-208ENST00000573857 MAST3O60307 1309 aa17.86■□□□□ 0.45
TVP23A-208ENST00000573857 CIAO1O76071 339 aa17.85■□□□□ 0.45
TVP23A-208ENST00000573857 LAMB1P07942 1786 aa17.85■□□□□ 0.45
TVP23A-208ENST00000573857 CACNB3P54284 484 aa17.85■□□□□ 0.45
TVP23A-208ENST00000573857 SIL1Q9H173 461 aa17.85■□□□□ 0.45
TVP23A-208ENST00000573857 ELP3Q9H9T3 547 aa17.85■□□□□ 0.45
TVP23A-208ENST00000573857 FBXO3Q9UK99 471 aa17.85■□□□□ 0.45
TVP23A-208ENST00000573857 RARSP54136 660 aaKnown RBP17.84■□□□□ 0.45
TVP23A-208ENST00000573857 APOBEC3HQ6NTF7 200 aaKnown RBP17.84■□□□□ 0.45
TVP23A-208ENST00000573857 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.84■□□□□ 0.45
TVP23A-208ENST00000573857 WDR66Q8TBY9 1149 aa17.84■□□□□ 0.45
TVP23A-208ENST00000573857 OPTNQ96CV9 577 aa17.84■□□□□ 0.45
TVP23A-208ENST00000573857 LRRFIP2Q9Y608 721 aaKnown RBP17.84■□□□□ 0.45
TVP23A-208ENST00000573857 OTOFQ9HC10 1997 aa17.84■□□□□ 0.45
TVP23A-208ENST00000573857 TESPA1A2RU30 521 aaPredicted RBP17.83■□□□□ 0.44
TVP23A-208ENST00000573857 VGLL4Q14135 290 aa17.83■□□□□ 0.44
TVP23A-208ENST00000573857 ATP2B3Q16720 1220 aa17.83■□□□□ 0.44
TVP23A-208ENST00000573857 FKBP1CQ5VVH2 108 aa17.83■□□□□ 0.44
TVP23A-208ENST00000573857 OTUD7BQ6GQQ9 843 aa17.83■□□□□ 0.44
TVP23A-208ENST00000573857 FBXO46Q6PJ61 603 aaPredicted RBP17.83■□□□□ 0.44
TVP23A-208ENST00000573857 HHIPL2Q6UWX4 724 aa17.83■□□□□ 0.44
TVP23A-208ENST00000573857 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.83■□□□□ 0.44
TVP23A-208ENST00000573857 TMOD2Q9NZR1 351 aa17.83■□□□□ 0.44
TVP23A-208ENST00000573857 CEP126Q9P2H0 1117 aa17.83■□□□□ 0.44
TVP23A-208ENST00000573857 HDAC5Q9UQL6 1122 aa17.83■□□□□ 0.44
TVP23A-208ENST00000573857 MAP3K9P80192 1104 aa17.82■□□□□ 0.44
TVP23A-208ENST00000573857 FAM83AQ86UY5 434 aa17.82■□□□□ 0.44
TVP23A-208ENST00000573857 CNKSR2Q8WXI2 1034 aa17.82■□□□□ 0.44
TVP23A-208ENST00000573857 MS4A4AQ96JQ5 239 aa17.82■□□□□ 0.44
TVP23A-208ENST00000573857 MEIS3Q99687 375 aa17.82■□□□□ 0.44
TVP23A-208ENST00000573857 PTPN18Q99952 460 aa17.82■□□□□ 0.44
TVP23A-208ENST00000573857 CSADQ9Y600 493 aa17.82■□□□□ 0.44
TVP23A-208ENST00000573857 IL15P40933 162 aaPredicted RBP17.81■□□□□ 0.44
TVP23A-208ENST00000573857 CRHR2Q13324 411 aa17.81■□□□□ 0.44
TVP23A-208ENST00000573857 PA2G4Q9UQ80 394 aaKnown RBP17.81■□□□□ 0.44
TVP23A-208ENST00000573857 MKI67P46013 3256 aaKnown RBP17.81■□□□□ 0.44
TVP23A-208ENST00000573857 BRI3BPQ8WY22 251 aa17.8■□□□□ 0.44
TVP23A-208ENST00000573857 ARHGAP45Q92619 1136 aa17.8■□□□□ 0.44
TVP23A-208ENST00000573857 GNL3LQ9NVN8 582 aaKnown RBP17.8■□□□□ 0.44
TVP23A-208ENST00000573857 RPAP1Q9BWH6 1393 aaPredicted RBP17.79■□□□□ 0.44
TVP23A-208ENST00000573857 BRCA2P51587 3418 aa17.79■□□□□ 0.44
TVP23A-208ENST00000573857 PRDX5P30044 214 aa17.79■□□□□ 0.44
TVP23A-208ENST00000573857 INTS3Q68E01 1043 aaKnown RBP17.79■□□□□ 0.44
TVP23A-208ENST00000573857 HOOK2Q96ED9 719 aa17.79■□□□□ 0.44
TVP23A-208ENST00000573857 OTUD5Q96G74 571 aa17.79■□□□□ 0.44
TVP23A-208ENST00000573857 COPRSQ9NQ92 184 aa17.79■□□□□ 0.44
TVP23A-208ENST00000573857 DAGLAQ9Y4D2 1042 aa17.79■□□□□ 0.44
TVP23A-208ENST00000573857 SALL1Q9NSC2 1324 aa17.78■□□□□ 0.44
TVP23A-208ENST00000573857 SPDYE5A6NIY4 337 aa17.78■□□□□ 0.44
TVP23A-208ENST00000573857 SEMA3EO15041 775 aa17.78■□□□□ 0.44
TVP23A-208ENST00000573857 PHKA1P46020 1223 aa17.78■□□□□ 0.44
TVP23A-208ENST00000573857 GTF2A2P52657 109 aa17.78■□□□□ 0.44
TVP23A-208ENST00000573857 DIXDC1Q155Q3 683 aa17.78■□□□□ 0.44
TVP23A-208ENST00000573857 OTOP1Q7RTM1 612 aa17.78■□□□□ 0.44
TVP23A-208ENST00000573857 ERO1AQ96HE7 468 aa17.78■□□□□ 0.44
TVP23A-208ENST00000573857 WRNIP1Q96S55 665 aa17.78■□□□□ 0.44
TVP23A-208ENST00000573857 TRIM17Q9Y577 477 aa17.78■□□□□ 0.44
TVP23A-208ENST00000573857 SNCAIPQ9Y6H5 919 aa17.78■□□□□ 0.44
TVP23A-208ENST00000573857 PDE4DIPQ5VU43 2346 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms