RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 CHMP4CQ96CF2 233 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 AIFM3Q96NN9 605 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 SHANK3Q9BYB0 1731 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 NWD2Q9ULI1 1742 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 TOGARAM1Q9Y4F4 1720 aa13.09□□□□□ -0.31
RPAIN-212ENST00000573126 TRDNQ13061 729 aa13.08□□□□□ -0.32
RPAIN-212ENST00000573126 CHAF1AQ13111 956 aaPredicted RBP13.08□□□□□ -0.32
RPAIN-212ENST00000573126 ARID5BQ14865 1188 aa13.08□□□□□ -0.32
RPAIN-212ENST00000573126 ADALQ6DHV7 355 aa13.08□□□□□ -0.32
RPAIN-212ENST00000573126 VGLL2Q8N8G2 317 aa13.08□□□□□ -0.32
RPAIN-212ENST00000573126 MAP7D2Q96T17 732 aa13.08□□□□□ -0.32
RPAIN-212ENST00000573126 SNAP23O00161 211 aa13.08□□□□□ -0.32
RPAIN-212ENST00000573126 MYSM1Q5VVJ2 828 aa13.08□□□□□ -0.32
RPAIN-212ENST00000573126 CCDC102BQ68D86 513 aa13.08□□□□□ -0.32
RPAIN-212ENST00000573126 DHX40Q8IX18 779 aaKnown RBP13.08□□□□□ -0.32
RPAIN-212ENST00000573126 ANO10Q9NW15 660 aa13.08□□□□□ -0.32
RPAIN-212ENST00000573126 CDHR2Q9BYE9 1310 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 ZNF532Q9HCE3 1301 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 RIOK3O14730 519 aaKnown RBP13.07□□□□□ -0.32
RPAIN-212ENST00000573126 PDE8BO95263 885 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 CYP19A1P11511 503 aaPredicted RBP13.07□□□□□ -0.32
RPAIN-212ENST00000573126 GTF2F1P35269 517 aaKnown RBP eCLIP13.07□□□□□ -0.32
RPAIN-212ENST00000573126 CYB5R4Q7L1T6 521 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 ZNF710Q8N1W2 664 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 AOPEPQ8N6M6 819 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 SENP2Q9HC62 589 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 WWC3Q9ULE0 1092 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 XIRP1Q702N8 1843 aaKnown RBP13.07□□□□□ -0.32
RPAIN-212ENST00000573126 B4E1Z4 1266 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 SPTLC2O15270 562 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 MICU3Q86XE3 530 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 CEP57L1Q8IYX8 460 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 INCENPQ9NQS7 918 aa13.07□□□□□ -0.32
RPAIN-212ENST00000573126 ANGEL1Q9UNK9 670 aaKnown RBP13.07□□□□□ -0.32
RPAIN-212ENST00000573126 ABCC12Q96J65 1359 aa13.06□□□□□ -0.32
RPAIN-212ENST00000573126 KIF23Q02241 960 aaPredicted RBP13.06□□□□□ -0.32
RPAIN-212ENST00000573126 SYNE3Q6ZMZ3 975 aa13.06□□□□□ -0.32
RPAIN-212ENST00000573126 FILIP1Q7Z7B0 1213 aa13.06□□□□□ -0.32
RPAIN-212ENST00000573126 KCNG4Q8TDN1 519 aa13.06□□□□□ -0.32
RPAIN-212ENST00000573126 POLR3EQ9NVU0 708 aa13.06□□□□□ -0.32
RPAIN-212ENST00000573126 PDE6AP16499 860 aa13.06□□□□□ -0.32
RPAIN-212ENST00000573126 SARM1Q6SZW1 724 aa13.06□□□□□ -0.32
RPAIN-212ENST00000573126 PHKBQ93100 1093 aa13.06□□□□□ -0.32
RPAIN-212ENST00000573126 UBN2Q6ZU65 1347 aa13.06□□□□□ -0.32
RPAIN-212ENST00000573126 A0A0G2JS52 829 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 A0A1W2PQ27 194 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 A0A1W2PQ64 194 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 A0A1W2PQD8 194 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 BIN1O00499 593 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 MARCKSP29966 332 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-212ENST00000573126 METAP2P50579 478 aaKnown RBP eCLIP13.05□□□□□ -0.32
RPAIN-212ENST00000573126 TTF1Q15361 905 aaPredicted RBP13.05□□□□□ -0.32
RPAIN-212ENST00000573126 DPCR1Q3MIW9 517 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 BRAPQ7Z569 592 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 MYL10Q9BUA6 226 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 YEATS4O95619 227 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 CDC27P30260 824 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 DZIP3Q86Y13 1208 aaKnown RBP13.05□□□□□ -0.32
RPAIN-212ENST00000573126 AIDAQ96BJ3 306 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 MRFAP1L1Q96HT8 127 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 BCL2L12Q9HB09 334 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 NEDD4P46934 1319 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 MYH15Q9Y2K3 1946 aa13.05□□□□□ -0.32
RPAIN-212ENST00000573126 PDE8AO60658 829 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 CDC25BP30305 580 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 ZRSR1Q15695 479 aaKnown RBP13.04□□□□□ -0.32
RPAIN-212ENST00000573126 ANO1Q5XXA6 986 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 APOA5Q6Q788 366 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 MTERF4Q7Z6M4 381 aaKnown RBP13.04□□□□□ -0.32
RPAIN-212ENST00000573126 LRRC8AQ8IWT6 810 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 ALG1Q9BT22 464 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 KIAA1468Q9P260 1216 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 UBE2Q2LH0YL09 131 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 SH2B2O14492 632 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-212ENST00000573126 UBE3CQ15386 1083 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 ZMYM6O95789 1325 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 ZNF202O95125 648 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 PUM3Q15397 648 aaKnown RBP13.04□□□□□ -0.32
RPAIN-212ENST00000573126 NFXL1Q6ZNB6 911 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 VPS37DQ86XT2 251 aa13.04□□□□□ -0.32
RPAIN-212ENST00000573126 ZNF512BQ96KM6 892 aaPredicted RBP13.04□□□□□ -0.32
RPAIN-212ENST00000573126 NAT10Q9H0A0 1025 aaKnown RBP13.04□□□□□ -0.32
RPAIN-212ENST00000573126 BCL9O00512 1426 aa13.03□□□□□ -0.32
RPAIN-212ENST00000573126 TCRBV5S4A2TA0A5A2 114 aa13.03□□□□□ -0.32
RPAIN-212ENST00000573126 WDHD1O75717 1129 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-212ENST00000573126 TNNT1P13805 278 aa13.03□□□□□ -0.32
RPAIN-212ENST00000573126 PFKFB1P16118 471 aa13.03□□□□□ -0.32
RPAIN-212ENST00000573126 AXDND1Q5T1B0 1012 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-212ENST00000573126 STRBPQ96SI9 672 aaKnown RBP13.03□□□□□ -0.32
RPAIN-212ENST00000573126 MROH7-TTC4A0A0A0MT08 1334 aa13.03□□□□□ -0.32
RPAIN-212ENST00000573126 WDR19Q8NEZ3 1342 aa13.03□□□□□ -0.32
RPAIN-212ENST00000573126 USP27XA6NNY8 438 aa13.03□□□□□ -0.32
RPAIN-212ENST00000573126 SLC3A2P08195 630 aaKnown RBP13.03□□□□□ -0.32
RPAIN-212ENST00000573126 ARID4AP29374 1257 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-212ENST00000573126 CTDSPL2Q05D32 466 aa13.03□□□□□ -0.32
RPAIN-212ENST00000573126 GNL2Q13823 731 aaKnown RBP13.03□□□□□ -0.32
RPAIN-212ENST00000573126 RASGRF1Q13972 1273 aa13.03□□□□□ -0.32
RPAIN-212ENST00000573126 TPD52L1Q16890 204 aaPredicted RBP13.03□□□□□ -0.32
RPAIN-212ENST00000573126 ISM2Q6H9L7 571 aa13.03□□□□□ -0.32
RPAIN-212ENST00000573126 STK11IPQ8N1F8 1099 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms