RNA–Protein interactions for RNA: ENST00000572694.1

ATP2A3-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-212ENST00000572694 ZNF296Q8WUU4 475 aaPredicted RBP21.36■■□□□ 1.01
ATP2A3-212ENST00000572694 TDRD3Q9H7E2 651 aaKnown RBP21.36■■□□□ 1.01
ATP2A3-212ENST00000572694 FBXO3Q9UK99 471 aa21.36■■□□□ 1.01
ATP2A3-212ENST00000572694 FZD1Q9UP38 647 aa21.36■■□□□ 1.01
ATP2A3-212ENST00000572694 SUGT1Q9Y2Z0 365 aa21.36■■□□□ 1.01
ATP2A3-212ENST00000572694 GPR25O00155 361 aa21.35■■□□□ 1.01
ATP2A3-212ENST00000572694 FRAT2O75474 233 aaPredicted RBP21.35■■□□□ 1.01
ATP2A3-212ENST00000572694 IFIT1P09914 478 aaKnown RBP21.35■■□□□ 1.01
ATP2A3-212ENST00000572694 PUM3Q15397 648 aaKnown RBP21.35■■□□□ 1.01
ATP2A3-212ENST00000572694 HDAC5Q9UQL6 1122 aa21.35■■□□□ 1.01
ATP2A3-212ENST00000572694 BCAMP50895 628 aa21.34■■□□□ 1.01
ATP2A3-212ENST00000572694 ANKRD13AQ8IZ07 590 aa21.34■■□□□ 1.01
ATP2A3-212ENST00000572694 WNK4Q96J92 1243 aa21.34■■□□□ 1.01
ATP2A3-212ENST00000572694 CLMNQ96JQ2 1002 aa21.34■■□□□ 1.01
ATP2A3-212ENST00000572694 TEPSINQ96N21 525 aa21.34■■□□□ 1.01
ATP2A3-212ENST00000572694 ARAP2Q8WZ64 1704 aa21.34■■□□□ 1.01
ATP2A3-212ENST00000572694 GRIK5Q16478 980 aa21.33■■□□□ 1.01
ATP2A3-212ENST00000572694 LPIN2Q92539 896 aa21.33■■□□□ 1.01
ATP2A3-212ENST00000572694 API5Q9BZZ5 524 aaKnown RBP21.33■■□□□ 1.01
ATP2A3-212ENST00000572694 NOB1Q9ULX3 412 aaKnown RBP21.33■■□□□ 1.01
ATP2A3-212ENST00000572694 IQSEC3Q9UPP2 1182 aaPredicted RBP21.33■■□□□ 1.01
ATP2A3-212ENST00000572694 LAMB1P07942 1786 aa21.33■■□□□ 1
ATP2A3-212ENST00000572694 UBTFL1P0CB47 393 aaPredicted RBP21.32■■□□□ 1
ATP2A3-212ENST00000572694 TNNI2P48788 182 aa21.32■■□□□ 1
ATP2A3-212ENST00000572694 ATG9AQ7Z3C6 839 aa21.32■■□□□ 1
ATP2A3-212ENST00000572694 IFNL1Q8IU54 200 aa21.32■■□□□ 1
ATP2A3-212ENST00000572694 CIAO1O76071 339 aa21.31■■□□□ 1
ATP2A3-212ENST00000572694 CHAF1AQ13111 956 aaPredicted RBP21.31■■□□□ 1
ATP2A3-212ENST00000572694 ARHGAP45Q92619 1136 aa21.31■■□□□ 1
ATP2A3-212ENST00000572694 TEKT1Q969V4 418 aa21.31■■□□□ 1
ATP2A3-212ENST00000572694 ZDHHC15Q96MV8 337 aa21.31■■□□□ 1
ATP2A3-212ENST00000572694 MAST3O60307 1309 aa21.3■■□□□ 1
ATP2A3-212ENST00000572694 TESPA1A2RU30 521 aaPredicted RBP21.3■■□□□ 1
ATP2A3-212ENST00000572694 FKTNO75072 461 aa21.3■■□□□ 1
ATP2A3-212ENST00000572694 SLC5A1P13866 664 aa21.3■■□□□ 1
ATP2A3-212ENST00000572694 FKBP1CQ5VVH2 108 aa21.3■■□□□ 1
ATP2A3-212ENST00000572694 HHIPL2Q6UWX4 724 aa21.3■■□□□ 1
ATP2A3-212ENST00000572694 R3HDMLQ9H3Y0 253 aa21.3■■□□□ 1
ATP2A3-212ENST00000572694 TCP10L2B9ZVM9 353 aa21.29■■□□□ 1
ATP2A3-212ENST00000572694 ZBTB22O15209 634 aa21.29■■□□□ 1
ATP2A3-212ENST00000572694 OTUD7BQ6GQQ9 843 aa21.29■■□□□ 1
ATP2A3-212ENST00000572694 WDR66Q8TBY9 1149 aa21.29■■□□□ 1
ATP2A3-212ENST00000572694 RARSP54136 660 aaKnown RBP21.28■■□□□ 1
ATP2A3-212ENST00000572694 FAM83AQ86UY5 434 aa21.28■■□□□ 1
ATP2A3-212ENST00000572694 TMEM39BQ9GZU3 492 aa21.28■■□□□ 1
ATP2A3-212ENST00000572694 CEP126Q9P2H0 1117 aa21.28■■□□□ 1
ATP2A3-212ENST00000572694 IGF2BP3O00425 579 aaKnown RBP eCLIP21.27■■□□□ 1
ATP2A3-212ENST00000572694 GJA5P36382 358 aa21.27■■□□□ 1
ATP2A3-212ENST00000572694 MAP3K9P80192 1104 aa21.27■■□□□ 1
ATP2A3-212ENST00000572694 APOBEC3HQ6NTF7 200 aaKnown RBP21.27■■□□□ 1
ATP2A3-212ENST00000572694 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.27■■□□□ 1
ATP2A3-212ENST00000572694 HPS5Q9UPZ3 1129 aa21.27■■□□□ 1
ATP2A3-212ENST00000572694 IL15P40933 162 aaPredicted RBP21.26■□□□□ 0.99
ATP2A3-212ENST00000572694 INTS3Q68E01 1043 aaKnown RBP21.26■□□□□ 0.99
ATP2A3-212ENST00000572694 FBXO46Q6PJ61 603 aaPredicted RBP21.26■□□□□ 0.99
ATP2A3-212ENST00000572694 COPRSQ9NQ92 184 aa21.26■□□□□ 0.99
ATP2A3-212ENST00000572694 CDAN1Q8IWY9 1227 aa21.25■□□□□ 0.99
ATP2A3-212ENST00000572694 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.25■□□□□ 0.99
ATP2A3-212ENST00000572694 HOOK2Q96ED9 719 aa21.25■□□□□ 0.99
ATP2A3-212ENST00000572694 MS4A4AQ96JQ5 239 aa21.25■□□□□ 0.99
ATP2A3-212ENST00000572694 TMOD2Q9NZR1 351 aa21.25■□□□□ 0.99
ATP2A3-212ENST00000572694 ATP2B3Q16720 1220 aa21.24■□□□□ 0.99
ATP2A3-212ENST00000572694 OPTNQ96CV9 577 aa21.24■□□□□ 0.99
ATP2A3-212ENST00000572694 PTPN18Q99952 460 aa21.24■□□□□ 0.99
ATP2A3-212ENST00000572694 ELP3Q9H9T3 547 aa21.24■□□□□ 0.99
ATP2A3-212ENST00000572694 GNL3LQ9NVN8 582 aaKnown RBP21.24■□□□□ 0.99
ATP2A3-212ENST00000572694 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.24■□□□□ 0.99
ATP2A3-212ENST00000572694 LRRFIP2Q9Y608 721 aaKnown RBP21.24■□□□□ 0.99
ATP2A3-212ENST00000572694 SEMA3EO15041 775 aa21.23■□□□□ 0.99
ATP2A3-212ENST00000572694 SIL1Q9H173 461 aa21.23■□□□□ 0.99
ATP2A3-212ENST00000572694 MYH13Q9UKX3 1938 aa21.23■□□□□ 0.99
ATP2A3-212ENST00000572694 SALL1Q9NSC2 1324 aa21.23■□□□□ 0.99
ATP2A3-212ENST00000572694 OTOFQ9HC10 1997 aa21.23■□□□□ 0.99
ATP2A3-212ENST00000572694 GNAI3P08754 354 aa21.22■□□□□ 0.99
ATP2A3-212ENST00000572694 CACNB3P54284 484 aa21.22■□□□□ 0.99
ATP2A3-212ENST00000572694 VGLL4Q14135 290 aa21.22■□□□□ 0.99
ATP2A3-212ENST00000572694 MEIS3Q99687 375 aa21.22■□□□□ 0.99
ATP2A3-212ENST00000572694 CSADQ9Y600 493 aa21.22■□□□□ 0.99
ATP2A3-212ENST00000572694 IPO8O15397 1037 aaKnown RBP21.21■□□□□ 0.99
ATP2A3-212ENST00000572694 GTF2A2P52657 109 aa21.21■□□□□ 0.99
ATP2A3-212ENST00000572694 MTX1Q13505 466 aa21.21■□□□□ 0.99
ATP2A3-212ENST00000572694 DENND2AQ9ULE3 1009 aa21.21■□□□□ 0.99
ATP2A3-212ENST00000572694 SOX10P56693 466 aa21.2■□□□□ 0.98
ATP2A3-212ENST00000572694 CRHR2Q13324 411 aa21.2■□□□□ 0.98
ATP2A3-212ENST00000572694 FAM151AQ8WW52 585 aa21.2■□□□□ 0.98
ATP2A3-212ENST00000572694 PA2G4Q9UQ80 394 aaKnown RBP21.2■□□□□ 0.98
ATP2A3-212ENST00000572694 RPAP1Q9BWH6 1393 aaPredicted RBP21.2■□□□□ 0.98
ATP2A3-212ENST00000572694 SPDYE5A6NIY4 337 aa21.19■□□□□ 0.98
ATP2A3-212ENST00000572694 DCAF15Q66K64 600 aa21.19■□□□□ 0.98
ATP2A3-212ENST00000572694 ERO1AQ96HE7 468 aa21.19■□□□□ 0.98
ATP2A3-212ENST00000572694 DAGLAQ9Y4D2 1042 aa21.19■□□□□ 0.98
ATP2A3-212ENST00000572694 LDHBP07195 334 aaKnown RBP21.18■□□□□ 0.98
ATP2A3-212ENST00000572694 ERO1BQ86YB8 467 aa21.18■□□□□ 0.98
ATP2A3-212ENST00000572694 BRI3BPQ8WY22 251 aa21.18■□□□□ 0.98
ATP2A3-212ENST00000572694 PRDX5P30044 214 aa21.17■□□□□ 0.98
ATP2A3-212ENST00000572694 PHKA1P46020 1223 aa21.17■□□□□ 0.98
ATP2A3-212ENST00000572694 SP3Q02447 781 aa21.17■□□□□ 0.98
ATP2A3-212ENST00000572694 CCDC102BQ68D86 513 aa21.17■□□□□ 0.98
ATP2A3-212ENST00000572694 CDC42EP5Q6NZY7 148 aa21.17■□□□□ 0.98
ATP2A3-212ENST00000572694 OTOP1Q7RTM1 612 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms