RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 POTEFA5A3E0 1075 aa12.45□□□□□ -0.42
TRAPPC1-205ENST00000572656 TCP10L2B9ZVM9 353 aa12.45□□□□□ -0.42
TRAPPC1-205ENST00000572656 ANP32CO43423 234 aa12.45□□□□□ -0.42
TRAPPC1-205ENST00000572656 NBPF7P0C2Y1 421 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC1-205ENST00000572656 MAP3K9P80192 1104 aa12.45□□□□□ -0.42
TRAPPC1-205ENST00000572656 HDLBPQ00341 1268 aaKnown RBP12.45□□□□□ -0.42
TRAPPC1-205ENST00000572656 VPS37DQ86XT2 251 aa12.45□□□□□ -0.42
TRAPPC1-205ENST00000572656 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
TRAPPC1-205ENST00000572656 ARMC5Q96C12 935 aa12.45□□□□□ -0.42
TRAPPC1-205ENST00000572656 TMEM39BQ9GZU3 492 aa12.45□□□□□ -0.42
TRAPPC1-205ENST00000572656 PDE4DIPQ5VU43 2346 aa12.45□□□□□ -0.42
TRAPPC1-205ENST00000572656 GTF2A2P52657 109 aa12.44□□□□□ -0.42
TRAPPC1-205ENST00000572656 VGLL4Q14135 290 aa12.44□□□□□ -0.42
TRAPPC1-205ENST00000572656 GRIK5Q16478 980 aa12.44□□□□□ -0.42
TRAPPC1-205ENST00000572656 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRAPPC1-205ENST00000572656 TBC1D22AQ8WUA7 517 aa12.44□□□□□ -0.42
TRAPPC1-205ENST00000572656 CNKSR2Q8WXI2 1034 aa12.44□□□□□ -0.42
TRAPPC1-205ENST00000572656 BRI3BPQ8WY22 251 aa12.44□□□□□ -0.42
TRAPPC1-205ENST00000572656 GCC1Q96CN9 775 aa12.44□□□□□ -0.42
TRAPPC1-205ENST00000572656 CSADQ9Y600 493 aa12.44□□□□□ -0.42
TRAPPC1-205ENST00000572656 CCL15-CCL14A0A0B4J2E2 113 aa12.43□□□□□ -0.42
TRAPPC1-205ENST00000572656 CAP1Q01518 475 aa12.43□□□□□ -0.42
TRAPPC1-205ENST00000572656 CHAF1AQ13111 956 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC1-205ENST00000572656 ARHGEF6Q15052 776 aa12.43□□□□□ -0.42
TRAPPC1-205ENST00000572656 CCL15Q16663 113 aa12.43□□□□□ -0.42
TRAPPC1-205ENST00000572656 RABL6Q3YEC7 729 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC1-205ENST00000572656 LRRC24Q50LG9 513 aa12.43□□□□□ -0.42
TRAPPC1-205ENST00000572656 CAVIN4Q5BKX8 364 aa12.43□□□□□ -0.42
TRAPPC1-205ENST00000572656 MRIQ9BWK5 157 aa12.43□□□□□ -0.42
TRAPPC1-205ENST00000572656 BICC1Q9H694 974 aaKnown RBP12.43□□□□□ -0.42
TRAPPC1-205ENST00000572656 ZFYVE28Q9HCC9 887 aa12.43□□□□□ -0.42
TRAPPC1-205ENST00000572656 IQSEC3Q9UPP2 1182 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC1-205ENST00000572656 FRAT2O75474 233 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC1-205ENST00000572656 PDE8BO95263 885 aa12.42□□□□□ -0.42
TRAPPC1-205ENST00000572656 TAF1CQ15572 869 aaPredicted RBP12.42□□□□□ -0.42
TRAPPC1-205ENST00000572656 METTL24Q5JXM2 366 aa12.42□□□□□ -0.42
TRAPPC1-205ENST00000572656 ANKRD44Q8N8A2 993 aa12.42□□□□□ -0.42
TRAPPC1-205ENST00000572656 VGLL2Q8N8G2 317 aa12.42□□□□□ -0.42
TRAPPC1-205ENST00000572656 TEKT1Q969V4 418 aa12.42□□□□□ -0.42
TRAPPC1-205ENST00000572656 OTUD5Q96G74 571 aa12.42□□□□□ -0.42
TRAPPC1-205ENST00000572656 HTTP42858 3142 aa12.41□□□□□ -0.42
TRAPPC1-205ENST00000572656 SPDYE5A6NIY4 337 aa12.41□□□□□ -0.42
TRAPPC1-205ENST00000572656 CACNB3P54284 484 aa12.41□□□□□ -0.42
TRAPPC1-205ENST00000572656 FKBP1CQ5VVH2 108 aa12.41□□□□□ -0.42
TRAPPC1-205ENST00000572656 FAM83AQ86UY5 434 aa12.41□□□□□ -0.42
TRAPPC1-205ENST00000572656 FAM43AQ8N2R8 423 aa12.41□□□□□ -0.42
TRAPPC1-205ENST00000572656 HOOK2Q96ED9 719 aa12.41□□□□□ -0.42
TRAPPC1-205ENST00000572656 ZDHHC15Q96MV8 337 aa12.41□□□□□ -0.42
TRAPPC1-205ENST00000572656 SUGT1Q9Y2Z0 365 aa12.41□□□□□ -0.42
TRAPPC1-205ENST00000572656 A0A1B0GUL6 1792 aa12.41□□□□□ -0.42
TRAPPC1-205ENST00000572656 WDHD1O75717 1129 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 CETPP11597 493 aa12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 EN2P19622 333 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 BCAMP50895 628 aa12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 NBPF11Q86T75 865 aa12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 ERO1BQ86YB8 467 aa12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 FAM9BQ8IZU0 186 aa12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 ZNF333Q96JL9 665 aa12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 TMEM106CQ9BVX2 250 aa12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 ZCCHC17Q9NP64 241 aaKnown RBP12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 TMOD2Q9NZR1 351 aa12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 SNCAIPQ9Y6H5 919 aa12.4□□□□□ -0.42
TRAPPC1-205ENST00000572656 MAST3O60307 1309 aa12.39□□□□□ -0.43
TRAPPC1-205ENST00000572656 KIF16BQ96L93 1317 aa12.39□□□□□ -0.43
TRAPPC1-205ENST00000572656 ECM29Q5VYK3 1845 aa12.39□□□□□ -0.43
TRAPPC1-205ENST00000572656 TLR2O60603 784 aa12.39□□□□□ -0.43
TRAPPC1-205ENST00000572656 SLC9C1Q4G0N8 1177 aa12.39□□□□□ -0.43
TRAPPC1-205ENST00000572656 HABP4Q5JVS0 413 aaKnown RBP12.39□□□□□ -0.43
TRAPPC1-205ENST00000572656 HHIPL2Q6UWX4 724 aa12.39□□□□□ -0.43
TRAPPC1-205ENST00000572656 ZKSCAN4Q969J2 545 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC1-205ENST00000572656 WRNIP1Q96S55 665 aa12.39□□□□□ -0.43
TRAPPC1-205ENST00000572656 PTCH2Q9Y6C5 1203 aa12.39□□□□□ -0.43
TRAPPC1-205ENST00000572656 PTPRCP08575 1304 aa12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 ZNF521Q96K83 1311 aa12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 LAMB1P07942 1786 aa12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 BTBD19C9JJ37 291 aa12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 IFIT1P09914 478 aaKnown RBP12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 FGFR2P21802 821 aa12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 PPIL2Q13356 520 aa12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 SNAPC2Q13487 334 aa12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 PUM3Q15397 648 aaKnown RBP12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 DCAF15Q66K64 600 aa12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 KLHDC4Q8TBB5 520 aa12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 USP44Q9H0E7 712 aa12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 CACNA1FO60840 1977 aa12.38□□□□□ -0.43
TRAPPC1-205ENST00000572656 IRF6O14896 467 aa12.37□□□□□ -0.43
TRAPPC1-205ENST00000572656 LACTBP83111 547 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC1-205ENST00000572656 PPATQ06203 517 aa12.37□□□□□ -0.43
TRAPPC1-205ENST00000572656 KIF22Q14807 665 aa12.37□□□□□ -0.43
TRAPPC1-205ENST00000572656 WDR66Q8TBY9 1149 aa12.37□□□□□ -0.43
TRAPPC1-205ENST00000572656 RPAP1Q9BWH6 1393 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC1-205ENST00000572656 EYA2O00167 538 aa12.36□□□□□ -0.43
TRAPPC1-205ENST00000572656 GNRH1P01148 92 aa12.36□□□□□ -0.43
TRAPPC1-205ENST00000572656 SLC4A8Q2Y0W8 1093 aa12.36□□□□□ -0.43
TRAPPC1-205ENST00000572656 MIGA2Q7L4E1 593 aa12.36□□□□□ -0.43
TRAPPC1-205ENST00000572656 FAM151AQ8WW52 585 aa12.36□□□□□ -0.43
TRAPPC1-205ENST00000572656 LPIN2Q92539 896 aa12.36□□□□□ -0.43
TRAPPC1-205ENST00000572656 ZNF341Q9BYN7 854 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms