RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 SERPINA10Q9UK55 444 aa12.66□□□□□ -0.38
GTF3C1-213ENST00000571886 DDX19BQ9UMR2 479 aa12.66□□□□□ -0.38
GTF3C1-213ENST00000571886 UBE2Q2LH0YL09 131 aa12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 PDE3AQ14432 1141 aa12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 TNNI3KQ59H18 835 aa12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 PI16Q6UXB8 463 aa12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 APOBEC3FQ8IUX4 373 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 WDR66Q8TBY9 1149 aa12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 DBNDD2Q9BQY9 259 aa12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 DEFB129Q9H1M3 183 aa12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 VEZTQ9HBM0 779 aa12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 DENND2AQ9ULE3 1009 aa12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 EXOC6BQ9Y2D4 811 aa12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 FPGT-TNNI3KV9GXZ4 949 aa12.65□□□□□ -0.38
GTF3C1-213ENST00000571886 FAM155AB1AL88 458 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-213ENST00000571886 CACNB3P54284 484 aa12.64□□□□□ -0.39
GTF3C1-213ENST00000571886 HDLBPQ00341 1268 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-213ENST00000571886 OS9Q13438 667 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-213ENST00000571886 PRKG1Q13976 671 aa12.64□□□□□ -0.39
GTF3C1-213ENST00000571886 DIXDC1Q155Q3 683 aa12.64□□□□□ -0.39
GTF3C1-213ENST00000571886 APOBEC3HQ6NTF7 200 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-213ENST00000571886 CDAN1Q8IWY9 1227 aa12.64□□□□□ -0.39
GTF3C1-213ENST00000571886 HHIPL1Q96JK4 782 aa12.64□□□□□ -0.39
GTF3C1-213ENST00000571886 MRIQ9BWK5 157 aa12.64□□□□□ -0.39
GTF3C1-213ENST00000571886 GNL3LQ9NVN8 582 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-213ENST00000571886 HMG20BQ9P0W2 317 aa12.64□□□□□ -0.39
GTF3C1-213ENST00000571886 AKAP11Q9UKA4 1901 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 MYH2Q9UKX2 1941 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 TCP10L2B9ZVM9 353 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 SEMA3EO15041 775 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 ZBTB22O15209 634 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 FOXN1O15353 648 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 ECE1P42892 770 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 RASA3Q14644 834 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 NBPF12Q5TAG4 269 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 RGMBQ6NW40 437 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 TBC1D9Q6ZT07 1266 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 TEKT1Q969V4 418 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 EAF2Q96CJ1 260 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 ZDHHC15Q96MV8 337 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 CCDC8Q9H0W5 538 aaPredicted RBP12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 GPR108Q9NPR9 543 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 WBP1LQ9NX94 342 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 TLR7Q9NYK1 1049 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 SUGT1Q9Y2Z0 365 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 SSC5DA1L4H1 1573 aa12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 MYO5AQ9Y4I1 1855 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-213ENST00000571886 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 PAPPA2Q9BXP8 1791 aa12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 MYO1BO43795 1136 aa12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 LDHBP07195 334 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 ARID4AP29374 1257 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 MCAMP43121 646 aa12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 HHIPL2Q6UWX4 724 aa12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 RPAP2Q8IXW5 612 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 ZNF384Q8TF68 577 aa12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 TEPSINQ96N21 525 aa12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 DBNLQ9UJU6 430 aaKnown RBP12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 DAGLAQ9Y4D2 1042 aa12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 THSD7BQ9C0I4 1608 aa12.62□□□□□ -0.39
GTF3C1-213ENST00000571886 APBB1O00213 710 aa12.61□□□□□ -0.39
GTF3C1-213ENST00000571886 ZNF157P51786 506 aaPredicted RBP12.61□□□□□ -0.39
GTF3C1-213ENST00000571886 GORABQ5T7V8 394 aa12.61□□□□□ -0.39
GTF3C1-213ENST00000571886 TMEM39BQ9GZU3 492 aa12.61□□□□□ -0.39
GTF3C1-213ENST00000571886 IL1RAPL2Q9NP60 686 aa12.61□□□□□ -0.39
GTF3C1-213ENST00000571886 SNRKQ9NRH2 765 aa12.61□□□□□ -0.39
GTF3C1-213ENST00000571886 ABCF2Q9UG63 623 aa12.61□□□□□ -0.39
GTF3C1-213ENST00000571886 USP2O75604 605 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-213ENST00000571886 MAP2K2P36507 400 aa12.6□□□□□ -0.39
GTF3C1-213ENST00000571886 RRP1P56182 461 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-213ENST00000571886 TTLL12Q14166 644 aaPredicted RBP12.6□□□□□ -0.39
GTF3C1-213ENST00000571886 CDC42EP5Q6NZY7 148 aa12.6□□□□□ -0.39
GTF3C1-213ENST00000571886 RASAL3Q86YV0 1011 aa12.6□□□□□ -0.39
GTF3C1-213ENST00000571886 SPATA5Q8NB90 893 aa12.6□□□□□ -0.39
GTF3C1-213ENST00000571886 RHPN1Q8TCX5 695 aa12.6□□□□□ -0.39
GTF3C1-213ENST00000571886 ANGEL1Q9UNK9 670 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-213ENST00000571886 MAST3O60307 1309 aa12.6□□□□□ -0.39
GTF3C1-213ENST00000571886 PDS5AQ29RF7 1337 aaKnown RBP12.6□□□□□ -0.39
GTF3C1-213ENST00000571886 SLC10A3P09131 477 aa12.59□□□□□ -0.39
GTF3C1-213ENST00000571886 NF2P35240 595 aa12.59□□□□□ -0.39
GTF3C1-213ENST00000571886 FKBP1BP68106 108 aa12.59□□□□□ -0.39
GTF3C1-213ENST00000571886 KIF23Q02241 960 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-213ENST00000571886 TTC39AQ5SRH9 613 aa12.59□□□□□ -0.39
GTF3C1-213ENST00000571886 LDLRAD1Q5T700 205 aa12.59□□□□□ -0.39
GTF3C1-213ENST00000571886 COL13A1Q5TAT6 717 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-213ENST00000571886 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-213ENST00000571886 PPP2R3BQ9Y5P8 575 aa12.59□□□□□ -0.39
GTF3C1-213ENST00000571886 NDUFB9Q9Y6M9 179 aa12.59□□□□□ -0.39
GTF3C1-213ENST00000571886 CYP2E1P05181 493 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 UQCRFS1P1P0C7P4 283 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 ZAP70P43403 619 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 MECOMQ03112 1051 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 NFIAQ12857 509 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 MKRN3Q13064 507 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 MAP3K11Q16584 847 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 CCDC158Q5M9N0 1113 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 ERICH6Q7L0X2 663 aa12.58□□□□□ -0.4
GTF3C1-213ENST00000571886 ARMC9Q7Z3E5 817 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms