RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 ARHGEF6Q15052 776 aa17.04■□□□□ 0.32
RPAIN-209ENST00000571558 B4GALNT3Q6L9W6 998 aa17.04■□□□□ 0.32
RPAIN-209ENST00000571558 FBXW7Q969H0 707 aa17.04■□□□□ 0.32
RPAIN-209ENST00000571558 MXD3Q9BW11 206 aa17.04■□□□□ 0.32
RPAIN-209ENST00000571558 RBBP6Q7Z6E9 1792 aaKnown RBP17.04■□□□□ 0.32
RPAIN-209ENST00000571558 PNMA6EA0A0J9YXQ4 647 aa17.04■□□□□ 0.32
RPAIN-209ENST00000571558 FXR1P51114 621 aaKnown RBP eCLIP17.04■□□□□ 0.32
RPAIN-209ENST00000571558 DLGAP5Q15398 846 aa17.04■□□□□ 0.32
RPAIN-209ENST00000571558 KIAA0825Q8IV33 1275 aa17.04■□□□□ 0.32
RPAIN-209ENST00000571558 SSH3Q8TE77 659 aa17.04■□□□□ 0.32
RPAIN-209ENST00000571558 WNK4Q96J92 1243 aa17.04■□□□□ 0.32
RPAIN-209ENST00000571558 CCDC136Q96JN2 1154 aa17.04■□□□□ 0.32
RPAIN-209ENST00000571558 EFCC1Q9HA90 598 aa17.04■□□□□ 0.32
RPAIN-209ENST00000571558 WTIPA6NIX2 430 aaPredicted RBP17.03■□□□□ 0.32
RPAIN-209ENST00000571558 IGF2BP3O00425 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
RPAIN-209ENST00000571558 CSF1RP07333 972 aa17.03■□□□□ 0.32
RPAIN-209ENST00000571558 IGHMBP2P38935 993 aaKnown RBP17.03■□□□□ 0.32
RPAIN-209ENST00000571558 TMEM106CQ9BVX2 250 aa17.03■□□□□ 0.32
RPAIN-209ENST00000571558 GREM2Q9H772 168 aa17.03■□□□□ 0.32
RPAIN-209ENST00000571558 ZNF804BA4D1E1 1349 aa17.02■□□□□ 0.32
RPAIN-209ENST00000571558 CENPFP49454 3210 aa17.02■□□□□ 0.31
RPAIN-209ENST00000571558 TESPA1A2RU30 521 aaPredicted RBP17.02■□□□□ 0.31
RPAIN-209ENST00000571558 MYO1BO43795 1136 aa17.02■□□□□ 0.31
RPAIN-209ENST00000571558 SP3Q02447 781 aa17.02■□□□□ 0.31
RPAIN-209ENST00000571558 POLA2Q14181 598 aa17.02■□□□□ 0.31
RPAIN-209ENST00000571558 TXNRD3Q86VQ6 643 aa17.02■□□□□ 0.31
RPAIN-209ENST00000571558 LAMB1P07942 1786 aa17.01■□□□□ 0.31
RPAIN-209ENST00000571558 IREB2P48200 963 aaKnown RBP17.01■□□□□ 0.31
RPAIN-209ENST00000571558 GTF2IP78347 998 aa17.01■□□□□ 0.31
RPAIN-209ENST00000571558 LMBR1LQ6UX01 489 aa17.01■□□□□ 0.31
RPAIN-209ENST00000571558 NBPF11Q86T75 865 aa17.01■□□□□ 0.31
RPAIN-209ENST00000571558 RWDD1Q9H446 243 aaPredicted RBP17.01■□□□□ 0.31
RPAIN-209ENST00000571558 ZNF646O15015 1829 aaPredicted RBP17.01■□□□□ 0.31
RPAIN-209ENST00000571558 SRGAP3O43295 1099 aa17■□□□□ 0.31
RPAIN-209ENST00000571558 CRHR2Q13324 411 aa17■□□□□ 0.31
RPAIN-209ENST00000571558 ANKRD13AQ8IZ07 590 aa17■□□□□ 0.31
RPAIN-209ENST00000571558 KIAA0100Q14667 2235 aaKnown RBP17■□□□□ 0.31
RPAIN-209ENST00000571558 EN2P19622 333 aaPredicted RBP16.99■□□□□ 0.31
RPAIN-209ENST00000571558 RFX5P48382 616 aaPredicted RBP16.99■□□□□ 0.31
RPAIN-209ENST00000571558 FKBP1AP62942 108 aaKnown RBP16.99■□□□□ 0.31
RPAIN-209ENST00000571558 CD99L2Q8TCZ2 262 aa16.99■□□□□ 0.31
RPAIN-209ENST00000571558 CLMNQ96JQ2 1002 aa16.99■□□□□ 0.31
RPAIN-209ENST00000571558 MPHOSPH8Q99549 860 aa16.99■□□□□ 0.31
RPAIN-209ENST00000571558 CD209Q9NNX6 404 aa16.99■□□□□ 0.31
RPAIN-209ENST00000571558 HMMRO75330 724 aa16.98■□□□□ 0.31
RPAIN-209ENST00000571558 C15orf52Q6ZUT6 534 aaKnown RBP16.98■□□□□ 0.31
RPAIN-209ENST00000571558 CENPQQ7L2Z9 268 aaPredicted RBP16.98■□□□□ 0.31
RPAIN-209ENST00000571558 ZNF333Q96JL9 665 aa16.98■□□□□ 0.31
RPAIN-209ENST00000571558 KCNJ4P48050 445 aa16.97■□□□□ 0.31
RPAIN-209ENST00000571558 SMC5Q8IY18 1101 aa16.97■□□□□ 0.31
RPAIN-209ENST00000571558 DCTPP1Q9H773 170 aa16.97■□□□□ 0.31
RPAIN-209ENST00000571558 SPDYE2BA6NHP3 402 aa16.96■□□□□ 0.31
RPAIN-209ENST00000571558 USP2O75604 605 aaPredicted RBP16.96■□□□□ 0.31
RPAIN-209ENST00000571558 SPDYE6P0CI01 402 aa16.96■□□□□ 0.31
RPAIN-209ENST00000571558 FZD1Q9UP38 647 aa16.96■□□□□ 0.31
RPAIN-209ENST00000571558 SSC5DA1L4H1 1573 aa16.96■□□□□ 0.31
RPAIN-209ENST00000571558 MYH3P11055 1940 aa16.96■□□□□ 0.31
RPAIN-209ENST00000571558 BRCA2P51587 3418 aa16.96■□□□□ 0.31
RPAIN-209ENST00000571558 ITGA6P23229 1130 aa16.96■□□□□ 0.3
RPAIN-209ENST00000571558 TNFAIP1Q13829 316 aa16.96■□□□□ 0.3
RPAIN-209ENST00000571558 SLC9C1Q4G0N8 1177 aa16.96■□□□□ 0.3
RPAIN-209ENST00000571558 PTPN18Q99952 460 aa16.96■□□□□ 0.3
RPAIN-209ENST00000571558 COLQQ9Y215 455 aaPredicted RBP16.96■□□□□ 0.3
RPAIN-209ENST00000571558 NOP58Q9Y2X3 529 aaKnown RBP16.96■□□□□ 0.3
RPAIN-209ENST00000571558 NBPF12Q5TAG4 269 aaPredicted RBP16.95■□□□□ 0.3
RPAIN-209ENST00000571558 CERS5Q8N5B7 392 aa16.95■□□□□ 0.3
RPAIN-209ENST00000571558 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
RPAIN-209ENST00000571558 WDHD1O75717 1129 aaPredicted RBP16.94■□□□□ 0.3
RPAIN-209ENST00000571558 IL1R1P14778 569 aa16.94■□□□□ 0.3
RPAIN-209ENST00000571558 KLRK1P26718 216 aa16.94■□□□□ 0.3
RPAIN-209ENST00000571558 GJA5P36382 358 aa16.94■□□□□ 0.3
RPAIN-209ENST00000571558 CHRNDQ07001 517 aa16.94■□□□□ 0.3
RPAIN-209ENST00000571558 CFAP100Q494V2 611 aa16.94■□□□□ 0.3
RPAIN-209ENST00000571558 KLHDC4Q8TBB5 520 aa16.94■□□□□ 0.3
RPAIN-209ENST00000571558 MS4A4AQ96JQ5 239 aa16.94■□□□□ 0.3
RPAIN-209ENST00000571558 PRMT6Q96LA8 375 aaPredicted RBP16.94■□□□□ 0.3
RPAIN-209ENST00000571558 ZFYVE28Q9HCC9 887 aa16.94■□□□□ 0.3
RPAIN-209ENST00000571558 PA2G4Q9UQ80 394 aaKnown RBP16.94■□□□□ 0.3
RPAIN-209ENST00000571558 GNRH1P01148 92 aa16.93■□□□□ 0.3
RPAIN-209ENST00000571558 RASA3Q14644 834 aa16.93■□□□□ 0.3
RPAIN-209ENST00000571558 CCDC57Q2TAC2 916 aa16.93■□□□□ 0.3
RPAIN-209ENST00000571558 ZNF804AQ7Z570 1209 aa16.93■□□□□ 0.3
RPAIN-209ENST00000571558 CHMP3Q9Y3E7 222 aa16.93■□□□□ 0.3
RPAIN-209ENST00000571558 CLRN2A0PK11 232 aa16.92■□□□□ 0.3
RPAIN-209ENST00000571558 GTF2A2P52657 109 aa16.92■□□□□ 0.3
RPAIN-209ENST00000571558 IFIT5Q13325 482 aaKnown RBP16.92■□□□□ 0.3
RPAIN-209ENST00000571558 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
RPAIN-209ENST00000571558 OPTNQ96CV9 577 aa16.92■□□□□ 0.3
RPAIN-209ENST00000571558 VEZTQ9HBM0 779 aa16.92■□□□□ 0.3
RPAIN-209ENST00000571558 ZCCHC17Q9NP64 241 aaKnown RBP16.92■□□□□ 0.3
RPAIN-209ENST00000571558 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.92■□□□□ 0.3
RPAIN-209ENST00000571558 EXOC6BQ9Y2D4 811 aa16.92■□□□□ 0.3
RPAIN-209ENST00000571558 IRS2Q9Y4H2 1338 aa16.92■□□□□ 0.3
RPAIN-209ENST00000571558 ECM29Q5VYK3 1845 aa16.91■□□□□ 0.3
RPAIN-209ENST00000571558 SURF6O75683 361 aaKnown RBP16.91■□□□□ 0.3
RPAIN-209ENST00000571558 PRMT2P55345 433 aa16.91■□□□□ 0.3
RPAIN-209ENST00000571558 ZNF594Q96JF6 807 aaPredicted RBP16.91■□□□□ 0.3
RPAIN-209ENST00000571558 CEP290O15078 2479 aa16.9■□□□□ 0.3
RPAIN-209ENST00000571558 ANKRD18BA2A2Z9 1011 aa16.9■□□□□ 0.3
RPAIN-209ENST00000571558 NUCB1Q02818 461 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms