RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 DZIP1LQ8IYY4 767 aaKnown RBP37.72■■■■□ 3.63
CTDNEP1-206ENST00000571409 GNAI2P04899 355 aa37.71■■■■□ 3.63
CTDNEP1-206ENST00000571409 SPDYE2Q495Y8 402 aa37.71■■■■□ 3.63
CTDNEP1-206ENST00000571409 TDRD3Q9H7E2 651 aaKnown RBP37.71■■■■□ 3.63
CTDNEP1-206ENST00000571409 ZNF70Q9UC06 446 aaPredicted RBP37.71■■■■□ 3.63
CTDNEP1-206ENST00000571409 SSC5DA1L4H1 1573 aa37.69■■■■□ 3.62
CTDNEP1-206ENST00000571409 ANGEL1Q9UNK9 670 aaKnown RBP37.69■■■■□ 3.62
CTDNEP1-206ENST00000571409 FZD1Q9UP38 647 aa37.69■■■■□ 3.62
CTDNEP1-206ENST00000571409 CAPN15O75808 1086 aa37.68■■■■□ 3.62
CTDNEP1-206ENST00000571409 HDLBPQ00341 1268 aaKnown RBP37.68■■■■□ 3.62
CTDNEP1-206ENST00000571409 CSRNP1Q96S65 589 aa37.68■■■■□ 3.62
CTDNEP1-206ENST00000571409 TNFAIP1Q13829 316 aa37.67■■■■□ 3.62
CTDNEP1-206ENST00000571409 RASA3Q14644 834 aa37.67■■■■□ 3.62
CTDNEP1-206ENST00000571409 TEKT1Q969V4 418 aa37.67■■■■□ 3.62
CTDNEP1-206ENST00000571409 SUGT1Q9Y2Z0 365 aa37.67■■■■□ 3.62
CTDNEP1-206ENST00000571409 WDR66Q8TBY9 1149 aa37.66■■■■□ 3.62
CTDNEP1-206ENST00000571409 GNL3LQ9NVN8 582 aaKnown RBP37.66■■■■□ 3.62
CTDNEP1-206ENST00000571409 AKAP11Q9UKA4 1901 aa37.65■■■■□ 3.62
CTDNEP1-206ENST00000571409 SUPT20HL1Q3ZLR7 823 aa37.65■■■■□ 3.62
CTDNEP1-206ENST00000571409 NBPF12Q5TAG4 269 aaPredicted RBP37.65■■■■□ 3.62
CTDNEP1-206ENST00000571409 MAST3O60307 1309 aa37.64■■■■□ 3.62
CTDNEP1-206ENST00000571409 LDLRAD1Q5T700 205 aa37.64■■■■□ 3.62
CTDNEP1-206ENST00000571409 FTSJ3Q8IY81 847 aaKnown RBP37.64■■■■□ 3.62
CTDNEP1-206ENST00000571409 REM2Q8IYK8 340 aaPredicted RBP37.64■■■■□ 3.62
CTDNEP1-206ENST00000571409 SAGE1Q9NXZ1 904 aa37.64■■■■□ 3.62
CTDNEP1-206ENST00000571409 PPP1R12BO60237 982 aaPredicted RBP37.63■■■■□ 3.61
CTDNEP1-206ENST00000571409 PHKA1P46020 1223 aa37.63■■■■□ 3.61
CTDNEP1-206ENST00000571409 MRIQ9BWK5 157 aa37.63■■■■□ 3.61
CTDNEP1-206ENST00000571409 RNF186Q9NXI6 227 aa37.63■■■■□ 3.61
CTDNEP1-206ENST00000571409 PNMA6EA0A0J9YXQ4 647 aa37.62■■■■□ 3.61
CTDNEP1-206ENST00000571409 TCP10L2B9ZVM9 353 aa37.62■■■■□ 3.61
CTDNEP1-206ENST00000571409 ADORA1P30542 326 aa37.62■■■■□ 3.61
CTDNEP1-206ENST00000571409 TFCP2Q12800 502 aa37.62■■■■□ 3.61
CTDNEP1-206ENST00000571409 MAP3K11Q16584 847 aa37.62■■■■□ 3.61
CTDNEP1-206ENST00000571409 TRPA1O75762 1119 aa37.61■■■■□ 3.61
CTDNEP1-206ENST00000571409 ZDHHC15Q96MV8 337 aa37.61■■■■□ 3.61
CTDNEP1-206ENST00000571409 TIMM10P62072 90 aa37.6■■■■□ 3.61
CTDNEP1-206ENST00000571409 MKRN3Q13064 507 aaKnown RBP37.6■■■■□ 3.61
CTDNEP1-206ENST00000571409 TNNI2P48788 182 aa37.59■■■■□ 3.61
CTDNEP1-206ENST00000571409 DENND2AQ9ULE3 1009 aa37.59■■■■□ 3.61
CTDNEP1-206ENST00000571409 AKAP2Q9Y2D5 859 aa37.59■■■■□ 3.61
CTDNEP1-206ENST00000571409 SEMA3EO15041 775 aa37.58■■■■□ 3.61
CTDNEP1-206ENST00000571409 CCDC102BQ68D86 513 aa37.58■■■■□ 3.61
CTDNEP1-206ENST00000571409 ITPRIPQ8IWB1 547 aa37.58■■■■□ 3.61
CTDNEP1-206ENST00000571409 CASP8AP2Q9UKL3 1982 aa37.57■■■■□ 3.61
CTDNEP1-206ENST00000571409 A0A1B0GUL7 405 aa37.57■■■■□ 3.6
CTDNEP1-206ENST00000571409 RLBP1P12271 317 aa37.57■■■■□ 3.6
CTDNEP1-206ENST00000571409 HHIPL2Q6UWX4 724 aa37.57■■■■□ 3.6
CTDNEP1-206ENST00000571409 ZBTB4Q9P1Z0 1013 aaPredicted RBP37.57■■■■□ 3.6
CTDNEP1-206ENST00000571409 CACNB3P54284 484 aa37.56■■■■□ 3.6
CTDNEP1-206ENST00000571409 APOBEC3HQ6NTF7 200 aaKnown RBP37.56■■■■□ 3.6
CTDNEP1-206ENST00000571409 TEPSINQ96N21 525 aa37.56■■■■□ 3.6
CTDNEP1-206ENST00000571409 TMEM39BQ9GZU3 492 aa37.56■■■■□ 3.6
CTDNEP1-206ENST00000571409 USP2O75604 605 aaPredicted RBP37.55■■■■□ 3.6
CTDNEP1-206ENST00000571409 PRDX5P30044 214 aa37.55■■■■□ 3.6
CTDNEP1-206ENST00000571409 IREB2P48200 963 aaKnown RBP37.55■■■■□ 3.6
CTDNEP1-206ENST00000571409 SLC10A4Q96EP9 437 aa37.55■■■■□ 3.6
CTDNEP1-206ENST00000571409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP37.55■■■■□ 3.6
CTDNEP1-206ENST00000571409 G3BP1Q13283 466 aaKnown RBP eCLIP37.54■■■■□ 3.6
CTDNEP1-206ENST00000571409 SPRYD7Q5W111 196 aa37.54■■■■□ 3.6
CTDNEP1-206ENST00000571409 CDAN1Q8IWY9 1227 aa37.54■■■■□ 3.6
CTDNEP1-206ENST00000571409 XAGE2Q96GT9 111 aa37.54■■■■□ 3.6
CTDNEP1-206ENST00000571409 CLMNQ96JQ2 1002 aa37.54■■■■□ 3.6
CTDNEP1-206ENST00000571409 TMOD2Q9NZR1 351 aa37.54■■■■□ 3.6
CTDNEP1-206ENST00000571409 SALL1Q9NSC2 1324 aa37.54■■■■□ 3.6
CTDNEP1-206ENST00000571409 LDHBP07195 334 aaKnown RBP37.53■■■■□ 3.6
CTDNEP1-206ENST00000571409 C1orf115Q9H7X2 142 aa37.53■■■■□ 3.6
CTDNEP1-206ENST00000571409 UNCXA6NJT0 531 aa37.52■■■■□ 3.6
CTDNEP1-206ENST00000571409 ZBTB22O15209 634 aa37.52■■■■□ 3.6
CTDNEP1-206ENST00000571409 NEUROD6Q96NK8 337 aa37.52■■■■□ 3.6
CTDNEP1-206ENST00000571409 TM4SF4P48230 202 aa37.51■■■■□ 3.6
CTDNEP1-206ENST00000571409 RASGRF1Q13972 1273 aa37.51■■■■□ 3.6
CTDNEP1-206ENST00000571409 MVPQ14764 893 aaKnown RBP37.51■■■■□ 3.6
CTDNEP1-206ENST00000571409 DIXDC1Q155Q3 683 aa37.51■■■■□ 3.6
CTDNEP1-206ENST00000571409 OTOFQ9HC10 1997 aa37.5■■■■□ 3.59
CTDNEP1-206ENST00000571409 ZBTB7BO15156 539 aaPredicted RBP37.5■■■■□ 3.59
CTDNEP1-206ENST00000571409 SREBF2Q12772 1141 aa37.5■■■■□ 3.59
CTDNEP1-206ENST00000571409 POLA2Q14181 598 aa37.5■■■■□ 3.59
CTDNEP1-206ENST00000571409 DAGLAQ9Y4D2 1042 aa37.5■■■■□ 3.59
CTDNEP1-206ENST00000571409 ATP8B2P98198 1209 aa37.49■■■■□ 3.59
CTDNEP1-206ENST00000571409 ANKRD13AQ8IZ07 590 aa37.49■■■■□ 3.59
CTDNEP1-206ENST00000571409 FKBP1CQ5VVH2 108 aa37.48■■■■□ 3.59
CTDNEP1-206ENST00000571409 FAM83AQ86UY5 434 aa37.48■■■■□ 3.59
CTDNEP1-206ENST00000571409 ZGPATQ8N5A5 531 aaKnown RBP37.48■■■■□ 3.59
CTDNEP1-206ENST00000571409 SSH3Q8TE77 659 aa37.48■■■■□ 3.59
CTDNEP1-206ENST00000571409 PDS5AQ29RF7 1337 aaKnown RBP37.47■■■■□ 3.59
CTDNEP1-206ENST00000571409 ABHD8Q96I13 439 aa37.47■■■■□ 3.59
CTDNEP1-206ENST00000571409 WNK4Q96J92 1243 aa37.47■■■■□ 3.59
CTDNEP1-206ENST00000571409 ZBTB48P10074 688 aaPredicted RBP37.46■■■■□ 3.59
CTDNEP1-206ENST00000571409 PANK1Q8TE04 598 aa37.46■■■■□ 3.59
CTDNEP1-206ENST00000571409 GORABQ5T7V8 394 aa37.45■■■■□ 3.59
CTDNEP1-206ENST00000571409 ABCF2Q9UG63 623 aa37.44■■■■□ 3.58
CTDNEP1-206ENST00000571409 MANSC4A6NHS7 340 aaPredicted RBP37.43■■■■□ 3.58
CTDNEP1-206ENST00000571409 OS9Q13438 667 aaPredicted RBP37.43■■■■□ 3.58
CTDNEP1-206ENST00000571409 CDC42EP5Q6NZY7 148 aa37.43■■■■□ 3.58
CTDNEP1-206ENST00000571409 LAMB1P07942 1786 aa37.42■■■■□ 3.58
CTDNEP1-206ENST00000571409 TBC1D8O95759 1140 aa37.42■■■■□ 3.58
CTDNEP1-206ENST00000571409 MCOLN1Q9GZU1 580 aa37.42■■■■□ 3.58
CTDNEP1-206ENST00000571409 MYH2Q9UKX2 1941 aa37.42■■■■□ 3.58
CTDNEP1-206ENST00000571409 SURF6O75683 361 aaKnown RBP37.41■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms