RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 VEZTQ9HBM0 779 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 ZNF70Q9UC06 446 aaPredicted RBP6.73□□□□□ -1.33
CHD3-212ENST00000570758 SERPINA10Q9UK55 444 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 FZD1Q9UP38 647 aa6.73□□□□□ -1.33
CHD3-212ENST00000570758 ECM29Q5VYK3 1845 aa6.72□□□□□ -1.33
CHD3-212ENST00000570758 MYO1BO43795 1136 aa6.72□□□□□ -1.33
CHD3-212ENST00000570758 NF2P35240 595 aa6.72□□□□□ -1.33
CHD3-212ENST00000570758 TIMM10P62072 90 aa6.72□□□□□ -1.33
CHD3-212ENST00000570758 TTLL12Q14166 644 aaPredicted RBP6.72□□□□□ -1.33
CHD3-212ENST00000570758 RASA3Q14644 834 aa6.72□□□□□ -1.33
CHD3-212ENST00000570758 LDLRAD1Q5T700 205 aa6.72□□□□□ -1.33
CHD3-212ENST00000570758 NBPF12Q5TAG4 269 aaPredicted RBP6.72□□□□□ -1.33
CHD3-212ENST00000570758 ARMC9Q7Z3E5 817 aa6.72□□□□□ -1.33
CHD3-212ENST00000570758 CDAN1Q8IWY9 1227 aa6.72□□□□□ -1.33
CHD3-212ENST00000570758 CSRNP1Q96S65 589 aa6.72□□□□□ -1.33
CHD3-212ENST00000570758 ANGEL1Q9UNK9 670 aaKnown RBP6.72□□□□□ -1.33
CHD3-212ENST00000570758 TCP10L2B9ZVM9 353 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 ZBTB7BO15156 539 aaPredicted RBP6.71□□□□□ -1.34
CHD3-212ENST00000570758 PRDX5P30044 214 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 CACNB3P54284 484 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 ATP8B2P98198 1209 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 HDLBPQ00341 1268 aaKnown RBP6.71□□□□□ -1.34
CHD3-212ENST00000570758 MKRN3Q13064 507 aaKnown RBP6.71□□□□□ -1.34
CHD3-212ENST00000570758 POLA2Q14181 598 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 CCDC102BQ68D86 513 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 APOBEC3HQ6NTF7 200 aaKnown RBP6.71□□□□□ -1.34
CHD3-212ENST00000570758 ITPRIPQ8IWB1 547 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 FTSJ3Q8IY81 847 aaKnown RBP6.71□□□□□ -1.34
CHD3-212ENST00000570758 WDR66Q8TBY9 1149 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 PANK1Q8TE04 598 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 TEKT1Q969V4 418 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 XAGE2Q96GT9 111 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 ZDHHC15Q96MV8 337 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 TEPSINQ96N21 525 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 BEGAINQ9BUH8 593 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.71□□□□□ -1.34
CHD3-212ENST00000570758 SUGT1Q9Y2Z0 365 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 PPP2R3BQ9Y5P8 575 aa6.71□□□□□ -1.34
CHD3-212ENST00000570758 A0A1B0GUL7 405 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 SEMA3EO15041 775 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 ZBTB22O15209 634 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 CA12O43570 354 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 USP2O75604 605 aaPredicted RBP6.7□□□□□ -1.34
CHD3-212ENST00000570758 G3BP1Q13283 466 aaKnown RBP eCLIP6.7□□□□□ -1.34
CHD3-212ENST00000570758 RASGRF1Q13972 1273 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 DIXDC1Q155Q3 683 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 MAP3K11Q16584 847 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 SSH3Q8TE77 659 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 CLMNQ96JQ2 1002 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 MRIQ9BWK5 157 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 TMEM39BQ9GZU3 492 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 GNL3LQ9NVN8 582 aaKnown RBP6.7□□□□□ -1.34
CHD3-212ENST00000570758 RNF186Q9NXI6 227 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 DENND2AQ9ULE3 1009 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 AKAP2Q9Y2D5 859 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 DAGLAQ9Y4D2 1042 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 MAST3O60307 1309 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 SALL1Q9NSC2 1324 aa6.7□□□□□ -1.34
CHD3-212ENST00000570758 PPP1R12BO60237 982 aaPredicted RBP6.69□□□□□ -1.34
CHD3-212ENST00000570758 TRPA1O75762 1119 aa6.69□□□□□ -1.34
CHD3-212ENST00000570758 CAPN15O75808 1086 aa6.69□□□□□ -1.34
CHD3-212ENST00000570758 LDHBP07195 334 aaKnown RBP6.69□□□□□ -1.34
CHD3-212ENST00000570758 GJA5P36382 358 aa6.69□□□□□ -1.34
CHD3-212ENST00000570758 TNFAIP1Q13829 316 aa6.69□□□□□ -1.34
CHD3-212ENST00000570758 MVPQ14764 893 aaKnown RBP6.69□□□□□ -1.34
CHD3-212ENST00000570758 SUPT20HL1Q3ZLR7 823 aa6.69□□□□□ -1.34
CHD3-212ENST00000570758 SPRYD7Q5W111 196 aa6.69□□□□□ -1.34
CHD3-212ENST00000570758 HHIPL2Q6UWX4 724 aa6.69□□□□□ -1.34
CHD3-212ENST00000570758 NEUROD6Q96NK8 337 aa6.69□□□□□ -1.34
CHD3-212ENST00000570758 SAGE1Q9NXZ1 904 aa6.69□□□□□ -1.34
CHD3-212ENST00000570758 HMG20BQ9P0W2 317 aa6.69□□□□□ -1.34
CHD3-212ENST00000570758 MYH13Q9UKX3 1938 aa6.69□□□□□ -1.34
CHD3-212ENST00000570758 SURF6O75683 361 aaKnown RBP6.68□□□□□ -1.34
CHD3-212ENST00000570758 TM4SF4P48230 202 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 TNNI2P48788 182 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 OS9Q13438 667 aaPredicted RBP6.68□□□□□ -1.34
CHD3-212ENST00000570758 TNNI3KQ59H18 835 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 FKBP1CQ5VVH2 108 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 CDC42EP5Q6NZY7 148 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 CEP85Q6P2H3 762 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 PI16Q6UXB8 463 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 ZNF384Q8TF68 577 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 SLC10A4Q96EP9 437 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 WNK4Q96J92 1243 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 DBNDD2Q9BQY9 259 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 ABCF2Q9UG63 623 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 RCAN3Q9UKA8 241 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 COG6Q9Y2V7 657 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 NOP58Q9Y2X3 529 aaKnown RBP6.68□□□□□ -1.34
CHD3-212ENST00000570758 FPGT-TNNI3KV9GXZ4 949 aa6.68□□□□□ -1.34
CHD3-212ENST00000570758 PDS5AQ29RF7 1337 aaKnown RBP6.68□□□□□ -1.34
CHD3-212ENST00000570758 PCNTO95613 3336 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 TBC1D8O95759 1140 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 ARID4AP29374 1257 aaPredicted RBP6.67□□□□□ -1.34
CHD3-212ENST00000570758 MCAMP43121 646 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 IREB2P48200 963 aaKnown RBP6.67□□□□□ -1.34
CHD3-212ENST00000570758 MAP3K9P80192 1104 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 TCP10Q12799 353 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 NFIAQ12857 509 aa6.67□□□□□ -1.34
CHD3-212ENST00000570758 GORABQ5T7V8 394 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms