RNA–Protein interactions for RNA: ENST00000570195.5

CMC2-223, Transcript of C-X9-C motif containing 2, human

TSL 3 BASIC

Gene CMC2, Length 871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-223	ENST00000570195	MS4A4A	Q96JQ5	239 aa		13.97	□□□□□ -0.17
CMC2-223	ENST00000570195	LAMB1	P07942	1786 aa		13.96	□□□□□ -0.17
CMC2-223	ENST00000570195	TAF1C	Q15572	869 aa	Predicted RBP	13.96	□□□□□ -0.17
CMC2-223	ENST00000570195	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.96	□□□□□ -0.17
CMC2-223	ENST00000570195	DZIP1L	Q8IYY4	767 aa	Known RBP	13.96	□□□□□ -0.17
CMC2-223	ENST00000570195	TEPSIN	Q96N21	525 aa		13.96	□□□□□ -0.17
CMC2-223	ENST00000570195	TMEM39B	Q9GZU3	492 aa		13.96	□□□□□ -0.17
CMC2-223	ENST00000570195	SERPINA10	Q9UK55	444 aa		13.96	□□□□□ -0.17
CMC2-223	ENST00000570195	OTOF	Q9HC10	1997 aa		13.96	□□□□□ -0.18
CMC2-223	ENST00000570195	BRCA2	P51587	3418 aa		13.95	□□□□□ -0.18
CMC2-223	ENST00000570195	CCL15-CCL14	A0A0B4J2E2	113 aa		13.95	□□□□□ -0.18
CMC2-223	ENST00000570195	GRM8	O00222	908 aa		13.95	□□□□□ -0.18
CMC2-223	ENST00000570195	HIBADH	P31937	336 aa	Known RBP	13.95	□□□□□ -0.18
CMC2-223	ENST00000570195	VGLL4	Q14135	290 aa		13.95	□□□□□ -0.18
CMC2-223	ENST00000570195	CCL15	Q16663	113 aa		13.95	□□□□□ -0.18
CMC2-223	ENST00000570195	FAM84B	Q96KN1	310 aa	Predicted RBP	13.95	□□□□□ -0.18
CMC2-223	ENST00000570195	TMEM106C	Q9BVX2	250 aa		13.95	□□□□□ -0.18
CMC2-223	ENST00000570195	PUS3	Q9BZE2	481 aa	Known RBP	13.95	□□□□□ -0.18
CMC2-223	ENST00000570195	PTCH2	Q9Y6C5	1203 aa		13.95	□□□□□ -0.18
CMC2-223	ENST00000570195	MYC	P01106	439 aa	Predicted RBP	13.94	□□□□□ -0.18
CMC2-223	ENST00000570195	CRK	P46108	304 aa		13.94	□□□□□ -0.18
CMC2-223	ENST00000570195	MAP3K9	P80192	1104 aa		13.94	□□□□□ -0.18
CMC2-223	ENST00000570195	UBE4A	Q14139	1066 aa		13.94	□□□□□ -0.18
CMC2-223	ENST00000570195	GRIK5	Q16478	980 aa		13.94	□□□□□ -0.18
CMC2-223	ENST00000570195	FAM43A	Q8N2R8	423 aa		13.94	□□□□□ -0.18
CMC2-223	ENST00000570195	OTUD5	Q96G74	571 aa		13.94	□□□□□ -0.18
CMC2-223	ENST00000570195	ZNF333	Q96JL9	665 aa		13.94	□□□□□ -0.18
CMC2-223	ENST00000570195	ZFYVE28	Q9HCC9	887 aa		13.94	□□□□□ -0.18
CMC2-223	ENST00000570195	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.94	□□□□□ -0.18
CMC2-223	ENST00000570195	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.94	□□□□□ -0.18
CMC2-223	ENST00000570195	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.94	□□□□□ -0.18
CMC2-223	ENST00000570195	TNNI2	P48788	182 aa		13.93	□□□□□ -0.18
CMC2-223	ENST00000570195	GTF2A2	P52657	109 aa		13.93	□□□□□ -0.18
CMC2-223	ENST00000570195	CACNB3	P54284	484 aa		13.93	□□□□□ -0.18
CMC2-223	ENST00000570195	SLC9C1	Q4G0N8	1177 aa		13.93	□□□□□ -0.18
CMC2-223	ENST00000570195	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
CMC2-223	ENST00000570195	CSAD	Q9Y600	493 aa		13.93	□□□□□ -0.18
CMC2-223	ENST00000570195	CHAF1A	Q13111	956 aa	Predicted RBP	13.92	□□□□□ -0.18
CMC2-223	ENST00000570195	ARHGEF6	Q15052	776 aa		13.92	□□□□□ -0.18
CMC2-223	ENST00000570195	SLC4A8	Q2Y0W8	1093 aa		13.92	□□□□□ -0.18
CMC2-223	ENST00000570195	SLC4A10	Q6U841	1118 aa		13.92	□□□□□ -0.18
CMC2-223	ENST00000570195	SUCLG2	Q96I99	432 aa		13.92	□□□□□ -0.18
CMC2-223	ENST00000570195	CACNA1F	O60840	1977 aa		13.92	□□□□□ -0.18
CMC2-223	ENST00000570195	ECM2	O94769	699 aa	Predicted RBP	13.91	□□□□□ -0.18
CMC2-223	ENST00000570195	NBPF11	Q86T75	865 aa		13.91	□□□□□ -0.18
CMC2-223	ENST00000570195	VPS37D	Q86XT2	251 aa		13.91	□□□□□ -0.18
CMC2-223	ENST00000570195	WDR63	Q8IWG1	891 aa		13.91	□□□□□ -0.18
CMC2-223	ENST00000570195	ARHGAP39	Q9C0H5	1083 aa		13.91	□□□□□ -0.18
CMC2-223	ENST00000570195	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.91	□□□□□ -0.18
CMC2-223	ENST00000570195	SPDYE5	A6NIY4	337 aa		13.9	□□□□□ -0.18
CMC2-223	ENST00000570195	FRAT2	O75474	233 aa	Predicted RBP	13.9	□□□□□ -0.18
CMC2-223	ENST00000570195	ALDH1L1	O75891	902 aa		13.9	□□□□□ -0.18
CMC2-223	ENST00000570195	FXR1	P51114	621 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
CMC2-223	ENST00000570195	FBXO33	Q7Z6M2	555 aa		13.9	□□□□□ -0.18
CMC2-223	ENST00000570195	SH3TC2	Q8TF17	1288 aa		13.9	□□□□□ -0.18
CMC2-223	ENST00000570195	KAZALD1	Q96I82	304 aa		13.9	□□□□□ -0.18
CMC2-223	ENST00000570195	SRCIN1	Q9C0H9	1055 aa		13.9	□□□□□ -0.18
CMC2-223	ENST00000570195	COLQ	Q9Y215	455 aa	Predicted RBP	13.9	□□□□□ -0.18
CMC2-223	ENST00000570195	RIPOR2	Q9Y4F9	1068 aa		13.9	□□□□□ -0.18
CMC2-223	ENST00000570195	SNCAIP	Q9Y6H5	919 aa		13.9	□□□□□ -0.18
CMC2-223	ENST00000570195	BTBD19	C9JJ37	291 aa		13.89	□□□□□ -0.19
CMC2-223	ENST00000570195	WDHD1	O75717	1129 aa	Predicted RBP	13.89	□□□□□ -0.19
CMC2-223	ENST00000570195	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.89	□□□□□ -0.19
CMC2-223	ENST00000570195	LRRC24	Q50LG9	513 aa		13.89	□□□□□ -0.19
CMC2-223	ENST00000570195	ZKSCAN4	Q969J2	545 aa	Predicted RBP	13.89	□□□□□ -0.19
CMC2-223	ENST00000570195	WRNIP1	Q96S55	665 aa		13.89	□□□□□ -0.19
CMC2-223	ENST00000570195	MRS2	Q9HD23	443 aa		13.89	□□□□□ -0.19
CMC2-223	ENST00000570195	ARAP2	Q8WZ64	1704 aa		13.89	□□□□□ -0.19
CMC2-223	ENST00000570195	MROH5	Q6ZUA9	1318 aa		13.89	□□□□□ -0.19
CMC2-223	ENST00000570195	ZSWIM8	A7E2V4	1837 aa		13.88	□□□□□ -0.19
CMC2-223	ENST00000570195	IRF6	O14896	467 aa		13.88	□□□□□ -0.19
CMC2-223	ENST00000570195	TLR2	O60603	784 aa		13.88	□□□□□ -0.19
CMC2-223	ENST00000570195	CETP	P11597	493 aa		13.88	□□□□□ -0.19
CMC2-223	ENST00000570195	KIF22	Q14807	665 aa		13.88	□□□□□ -0.19
CMC2-223	ENST00000570195	METTL24	Q5JXM2	366 aa		13.88	□□□□□ -0.19
CMC2-223	ENST00000570195	ERO1B	Q86YB8	467 aa		13.88	□□□□□ -0.19
CMC2-223	ENST00000570195	TBC1D22A	Q8WUA7	517 aa		13.88	□□□□□ -0.19
CMC2-223	ENST00000570195	TEKT1	Q969V4	418 aa		13.88	□□□□□ -0.19
CMC2-223	ENST00000570195	TMOD2	Q9NZR1	351 aa		13.88	□□□□□ -0.19
CMC2-223	ENST00000570195	LACTB	P83111	547 aa	Predicted RBP	13.87	□□□□□ -0.19
CMC2-223	ENST00000570195	HDLBP	Q00341	1268 aa	Known RBP	13.87	□□□□□ -0.19
CMC2-223	ENST00000570195	SNAPC2	Q13487	334 aa		13.87	□□□□□ -0.19
CMC2-223	ENST00000570195	CAVIN4	Q5BKX8	364 aa		13.87	□□□□□ -0.19
CMC2-223	ENST00000570195	BICC1	Q9H694	974 aa	Known RBP	13.87	□□□□□ -0.19
CMC2-223	ENST00000570195	BCAM	P50895	628 aa		13.86	□□□□□ -0.19
CMC2-223	ENST00000570195	PPIL2	Q13356	520 aa		13.86	□□□□□ -0.19
CMC2-223	ENST00000570195	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.86	□□□□□ -0.19
CMC2-223	ENST00000570195	MIGA2	Q7L4E1	593 aa		13.86	□□□□□ -0.19
CMC2-223	ENST00000570195	KLHDC4	Q8TBB5	520 aa		13.86	□□□□□ -0.19
CMC2-223	ENST00000570195	ZDHHC15	Q96MV8	337 aa		13.86	□□□□□ -0.19
CMC2-223	ENST00000570195	CPA4	Q9UI42	421 aa		13.86	□□□□□ -0.19
CMC2-223	ENST00000570195	CEP290	O15078	2479 aa		13.85	□□□□□ -0.19
CMC2-223	ENST00000570195		H0YGN5	161 aa		13.85	□□□□□ -0.19
CMC2-223	ENST00000570195	PDE8B	O95263	885 aa		13.85	□□□□□ -0.19
CMC2-223	ENST00000570195	INPP5B	P32019	993 aa		13.85	□□□□□ -0.19
CMC2-223	ENST00000570195	FAM83A	Q86UY5	434 aa		13.85	□□□□□ -0.19
CMC2-223	ENST00000570195	ANKRD44	Q8N8A2	993 aa		13.85	□□□□□ -0.19
CMC2-223	ENST00000570195	VGLL2	Q8N8G2	317 aa		13.85	□□□□□ -0.19
CMC2-223	ENST00000570195	ZCCHC17	Q9NP64	241 aa	Known RBP	13.85	□□□□□ -0.19
CMC2-223	ENST00000570195	CTGF	P29279	349 aa		13.84	□□□□□ -0.19

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