RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 RBM6P78332 1123 aaKnown RBP4.36□□□□□ -1.71
CNOT1-221ENST00000569924 COL9A2Q14055 689 aaPredicted RBP4.36□□□□□ -1.71
CNOT1-221ENST00000569924 RC3H1Q5TC82 1133 aaKnown RBP4.36□□□□□ -1.71
CNOT1-221ENST00000569924 ZNF438Q7Z4V0 828 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 RELL1Q8IUW5 271 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 C7orf43Q8WVR3 580 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 TRIM55Q9BYV6 548 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 EFR3BQ9Y2G0 817 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 SUGT1Q9Y2Z0 365 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 PNPLA6Q8IY17 1366 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 PTCH1Q13635 1447 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 C1orf167Q5SNV9 1468 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 NEXMIFQ5QGS0 1516 aa4.36□□□□□ -1.71
CNOT1-221ENST00000569924 NALCNQ8IZF0 1738 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 SIAH2O43255 324 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 PHACTR2O75167 634 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 GADD45BO75293 160 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-221ENST00000569924 EIF4A3P38919 411 aaKnown RBP4.35□□□□□ -1.71
CNOT1-221ENST00000569924 MMRN1Q13201 1228 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 IER5Q5VY09 327 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 GALNT12Q8IXK2 581 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 KDF1Q8NAX2 398 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-221ENST00000569924 EAF1Q96JC9 268 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-221ENST00000569924 TMEM74Q96NL1 305 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 DEPDC7Q96QD5 511 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 ZSCAN10Q96SZ4 725 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-221ENST00000569924 NT5C1AQ9BXI3 368 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 SLKQ9H2G2 1235 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-221ENST00000569924 NPHS2Q9NP85 383 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 GINM1Q9NU53 330 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 PPP4R2Q9NY27 417 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 SNTG2Q9NY99 539 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 MRVI1Q9Y6F6 885 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 RGS12O14924 1447 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 CLTCL1P53675 1640 aa4.35□□□□□ -1.71
CNOT1-221ENST00000569924 FAM221BA6H8Z2 402 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 MINDY4BA8MYZ0 360 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 NR3C2P08235 984 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 GTF2E1P29083 439 aaPredicted RBP4.34□□□□□ -1.71
CNOT1-221ENST00000569924 GBP2P32456 591 aaPredicted RBP4.34□□□□□ -1.71
CNOT1-221ENST00000569924 TXLNAP40222 546 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 PTGIRP43119 386 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 RPIAP49247 311 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 CHMP4BP1P59074 171 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 CBLBQ13191 982 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 RASA3Q14644 834 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 TMEM214Q6NUQ4 689 aaKnown RBP4.34□□□□□ -1.71
CNOT1-221ENST00000569924 RPUSD2Q8IZ73 545 aaKnown RBP4.34□□□□□ -1.71
CNOT1-221ENST00000569924 ANKLE1Q8NAG6 615 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 RHBDD1Q8TEB9 315 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 ZNF296Q8WUU4 475 aaPredicted RBP4.34□□□□□ -1.71
CNOT1-221ENST00000569924 KCTD12Q96CX2 325 aaKnown RBP4.34□□□□□ -1.71
CNOT1-221ENST00000569924 NLRP3Q96P20 1036 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 SUV39H2Q9H5I1 410 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 ELP3Q9H9T3 547 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 TTF2Q9UNY4 1162 aaKnown RBP4.34□□□□□ -1.71
CNOT1-221ENST00000569924 R3HCC1Q9Y3T6 440 aaKnown RBP4.34□□□□□ -1.71
CNOT1-221ENST00000569924 TLL2Q9Y6L7 1015 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 SOS2Q07890 1332 aaPredicted RBP4.34□□□□□ -1.71
CNOT1-221ENST00000569924 RPGRIP1LQ68CZ1 1315 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 COL22A1Q8NFW1 1626 aaPredicted RBP4.34□□□□□ -1.71
CNOT1-221ENST00000569924 KIF1BO60333 1816 aa4.34□□□□□ -1.71
CNOT1-221ENST00000569924 HFM1A2PYH4 1435 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 ROBO2Q9HCK4 1378 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 RNF223E7ERA6 249 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 MEN1O00255 615 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 CDC45O75419 566 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 CD2BP2O95400 341 aaKnown RBP4.33□□□□□ -1.72
CNOT1-221ENST00000569924 POLR3DP05423 398 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-221ENST00000569924 RLBP1P12271 317 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 INPP5BP32019 993 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 IDH3AP50213 366 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 ARSDP51689 593 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 MAP3K10Q02779 954 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 GRM2Q14416 872 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 CCDC85BQ15834 202 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-221ENST00000569924 PLEKHG6Q3KR16 790 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 ARSHQ5FYA8 562 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 PLA2G2CQ5R387 149 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 CMTR1Q8N1G2 835 aaKnown RBP4.33□□□□□ -1.72
CNOT1-221ENST00000569924 C3orf58Q8NDZ4 430 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 RHPN1Q8TCX5 695 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 ANKRD24Q8TF21 1146 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 CPLX3Q8WVH0 158 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 HNRNPLLQ8WVV9 542 aaKnown RBP4.33□□□□□ -1.72
CNOT1-221ENST00000569924 DDX17Q92841 729 aaKnown RBP4.33□□□□□ -1.72
CNOT1-221ENST00000569924 PMEPA1Q969W9 287 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 SUSD3Q96L08 255 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 CCDC113Q9H0I3 377 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 IRF2BPLQ9H1B7 796 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 KCNQ5Q9NR82 932 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 FANCLQ9NW38 375 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 DDX56Q9NY93 547 aaKnown RBP4.33□□□□□ -1.72
CNOT1-221ENST00000569924 CHPF2Q9P2E5 772 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 ANKIB1Q9P2G1 1089 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 PRKAG3Q9UGI9 489 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 TRPC5Q9UL62 973 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-221ENST00000569924 RTCBQ9Y3I0 505 aaKnown RBP4.33□□□□□ -1.72
CNOT1-221ENST00000569924 RIPOR2Q9Y4F9 1068 aa4.33□□□□□ -1.72
CNOT1-221ENST00000569924 GPC6Q9Y625 555 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms