RNA–Protein interactions for RNA: ENST00000569804.2

LPCAT4-208, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 657 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-208ENST00000569804 TDRD3Q9H7E2 651 aaKnown RBP13.65□□□□□ -0.22
LPCAT4-208ENST00000569804 CCL15-CCL14A0A0B4J2E2 113 aa13.64□□□□□ -0.23
LPCAT4-208ENST00000569804 SPDYE5A6NIY4 337 aa13.64□□□□□ -0.23
LPCAT4-208ENST00000569804 TNFAIP1Q13829 316 aa13.64□□□□□ -0.23
LPCAT4-208ENST00000569804 CCL15Q16663 113 aa13.64□□□□□ -0.23
LPCAT4-208ENST00000569804 SLC9C1Q4G0N8 1177 aa13.64□□□□□ -0.23
LPCAT4-208ENST00000569804 DZIP1LQ8IYY4 767 aaKnown RBP13.64□□□□□ -0.23
LPCAT4-208ENST00000569804 SNCAIPQ9Y6H5 919 aa13.64□□□□□ -0.23
LPCAT4-208ENST00000569804 IL16Q14005 1332 aa13.64□□□□□ -0.23
LPCAT4-208ENST00000569804 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
LPCAT4-208ENST00000569804 COL6A3P12111 3177 aa13.63□□□□□ -0.23
LPCAT4-208ENST00000569804 F6X3S4 739 aa13.63□□□□□ -0.23
LPCAT4-208ENST00000569804 GTF2A2P52657 109 aa13.63□□□□□ -0.23
LPCAT4-208ENST00000569804 RBM5P52756 815 aaKnown RBP eCLIP13.63□□□□□ -0.23
LPCAT4-208ENST00000569804 LMBR1LQ6UX01 489 aa13.63□□□□□ -0.23
LPCAT4-208ENST00000569804 FAM84BQ96KN1 310 aaPredicted RBP13.63□□□□□ -0.23
LPCAT4-208ENST00000569804 TMEM106CQ9BVX2 250 aa13.63□□□□□ -0.23
LPCAT4-208ENST00000569804 ZFYVE28Q9HCC9 887 aa13.63□□□□□ -0.23
LPCAT4-208ENST00000569804 TTF2Q9UNY4 1162 aaKnown RBP13.63□□□□□ -0.23
LPCAT4-208ENST00000569804 TCP10L2B9ZVM9 353 aa13.62□□□□□ -0.23
LPCAT4-208ENST00000569804 H0YGN5 161 aa13.62□□□□□ -0.23
LPCAT4-208ENST00000569804 TLR2O60603 784 aa13.62□□□□□ -0.23
LPCAT4-208ENST00000569804 CTGFP29279 349 aa13.62□□□□□ -0.23
LPCAT4-208ENST00000569804 CRKP46108 304 aa13.62□□□□□ -0.23
LPCAT4-208ENST00000569804 GYG1P46976 350 aa13.62□□□□□ -0.23
LPCAT4-208ENST00000569804 MAP3K9P80192 1104 aa13.62□□□□□ -0.23
LPCAT4-208ENST00000569804 LACTBP83111 547 aaPredicted RBP13.62□□□□□ -0.23
LPCAT4-208ENST00000569804 CCDC184Q52MB2 194 aa13.62□□□□□ -0.23
LPCAT4-208ENST00000569804 SH3TC2Q8TF17 1288 aa13.62□□□□□ -0.23
LPCAT4-208ENST00000569804 ADGRA2Q96PE1 1338 aa13.62□□□□□ -0.23
LPCAT4-208ENST00000569804 BTBD19C9JJ37 291 aa13.61□□□□□ -0.23
LPCAT4-208ENST00000569804 VAMP4O75379 141 aa13.61□□□□□ -0.23
LPCAT4-208ENST00000569804 UBE4AQ14139 1066 aa13.61□□□□□ -0.23
LPCAT4-208ENST00000569804 LDHAL6AQ6ZMR3 332 aa13.61□□□□□ -0.23
LPCAT4-208ENST00000569804 UBE2Q1Q7Z7E8 422 aa13.61□□□□□ -0.23
LPCAT4-208ENST00000569804 NBPF11Q86T75 865 aa13.61□□□□□ -0.23
LPCAT4-208ENST00000569804 KAZALD1Q96I82 304 aa13.61□□□□□ -0.23
LPCAT4-208ENST00000569804 ZCCHC17Q9NP64 241 aaKnown RBP13.61□□□□□ -0.23
LPCAT4-208ENST00000569804 CHMP3Q9Y3E7 222 aa13.61□□□□□ -0.23
LPCAT4-208ENST00000569804 RPAP1Q9BWH6 1393 aaPredicted RBP13.6□□□□□ -0.23
LPCAT4-208ENST00000569804 GRM8O00222 908 aa13.6□□□□□ -0.23
LPCAT4-208ENST00000569804 IRF6O14896 467 aa13.6□□□□□ -0.23
LPCAT4-208ENST00000569804 MGAMO43451 1857 aa13.6□□□□□ -0.23
LPCAT4-208ENST00000569804 CACNB3P54284 484 aa13.6□□□□□ -0.23
LPCAT4-208ENST00000569804 PUS3Q9BZE2 481 aaKnown RBP13.6□□□□□ -0.23
LPCAT4-208ENST00000569804 PRO3102Q9H379 93 aa13.6□□□□□ -0.23
LPCAT4-208ENST00000569804 MYH13Q9UKX3 1938 aa13.6□□□□□ -0.23
LPCAT4-208ENST00000569804 PLIN1O60240 522 aa13.59□□□□□ -0.23
LPCAT4-208ENST00000569804 MYCP01106 439 aaPredicted RBP13.59□□□□□ -0.23
LPCAT4-208ENST00000569804 HIBADHP31937 336 aaKnown RBP13.59□□□□□ -0.23
LPCAT4-208ENST00000569804 MTFR1Q15390 333 aa13.59□□□□□ -0.23
LPCAT4-208ENST00000569804 CCDC57Q2TAC2 916 aa13.59□□□□□ -0.23
LPCAT4-208ENST00000569804 SLC4A8Q2Y0W8 1093 aa13.59□□□□□ -0.23
LPCAT4-208ENST00000569804 NCBP3Q53F19 620 aaKnown RBP13.59□□□□□ -0.23
LPCAT4-208ENST00000569804 CNNM1Q9NRU3 951 aa13.59□□□□□ -0.23
LPCAT4-208ENST00000569804 CSADQ9Y600 493 aa13.59□□□□□ -0.23
LPCAT4-208ENST00000569804 CETPP11597 493 aa13.58□□□□□ -0.24
LPCAT4-208ENST00000569804 HDLBPQ00341 1268 aaKnown RBP13.58□□□□□ -0.24
LPCAT4-208ENST00000569804 ARHGEF6Q15052 776 aa13.58□□□□□ -0.24
LPCAT4-208ENST00000569804 C17orf99Q6UX52 265 aa13.58□□□□□ -0.24
LPCAT4-208ENST00000569804 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
LPCAT4-208ENST00000569804 FBXO33Q7Z6M2 555 aa13.58□□□□□ -0.24
LPCAT4-208ENST00000569804 ERO1BQ86YB8 467 aa13.58□□□□□ -0.24
LPCAT4-208ENST00000569804 VGLL2Q8N8G2 317 aa13.58□□□□□ -0.24
LPCAT4-208ENST00000569804 ZKSCAN4Q969J2 545 aaPredicted RBP13.58□□□□□ -0.24
LPCAT4-208ENST00000569804 WRNIP1Q96S55 665 aa13.58□□□□□ -0.24
LPCAT4-208ENST00000569804 RIPOR2Q9Y4F9 1068 aa13.58□□□□□ -0.24
LPCAT4-208ENST00000569804 PTPRFP10586 1907 aa13.58□□□□□ -0.24
LPCAT4-208ENST00000569804 ALPK3Q96L96 1907 aa13.57□□□□□ -0.24
LPCAT4-208ENST00000569804 GNRH1P01148 92 aa13.57□□□□□ -0.24
LPCAT4-208ENST00000569804 TNNI2P48788 182 aa13.57□□□□□ -0.24
LPCAT4-208ENST00000569804 PPIL2Q13356 520 aa13.57□□□□□ -0.24
LPCAT4-208ENST00000569804 MOGSQ13724 837 aa13.57□□□□□ -0.24
LPCAT4-208ENST00000569804 APOBEC3HQ6NTF7 200 aaKnown RBP13.57□□□□□ -0.24
LPCAT4-208ENST00000569804 FAM83AQ86UY5 434 aa13.57□□□□□ -0.24
LPCAT4-208ENST00000569804 SUCLG2Q96I99 432 aa13.57□□□□□ -0.24
LPCAT4-208ENST00000569804 TRIM47Q96LD4 638 aa13.57□□□□□ -0.24
LPCAT4-208ENST00000569804 ZDHHC15Q96MV8 337 aa13.57□□□□□ -0.24
LPCAT4-208ENST00000569804 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
LPCAT4-208ENST00000569804 A0A0C4DFX4 3053 aa13.57□□□□□ -0.24
LPCAT4-208ENST00000569804 PRMT2P55345 433 aa13.56□□□□□ -0.24
LPCAT4-208ENST00000569804 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
LPCAT4-208ENST00000569804 SNAPC2Q13487 334 aa13.56□□□□□ -0.24
LPCAT4-208ENST00000569804 TAF7LQ5H9L4 462 aa13.56□□□□□ -0.24
LPCAT4-208ENST00000569804 FKBP1CQ5VVH2 108 aa13.56□□□□□ -0.24
LPCAT4-208ENST00000569804 SPINK5Q9NQ38 1064 aaPredicted RBP13.56□□□□□ -0.24
LPCAT4-208ENST00000569804 SRRDQ9UH36 339 aa13.56□□□□□ -0.24
LPCAT4-208ENST00000569804 IQSEC3Q9UPP2 1182 aaPredicted RBP13.56□□□□□ -0.24
LPCAT4-208ENST00000569804 UTYO14607 1347 aa13.56□□□□□ -0.24
LPCAT4-208ENST00000569804 CUL9Q8IWT3 2517 aa13.56□□□□□ -0.24
LPCAT4-208ENST00000569804 OSBPP22059 807 aa13.55□□□□□ -0.24
LPCAT4-208ENST00000569804 INPP5BP32019 993 aa13.55□□□□□ -0.24
LPCAT4-208ENST00000569804 RABL6Q3YEC7 729 aaPredicted RBP13.55□□□□□ -0.24
LPCAT4-208ENST00000569804 TEKT1Q969V4 418 aa13.55□□□□□ -0.24
LPCAT4-208ENST00000569804 KCNH4Q9UQ05 1017 aa13.55□□□□□ -0.24
LPCAT4-208ENST00000569804 DOCK2Q92608 1830 aa13.55□□□□□ -0.24
LPCAT4-208ENST00000569804 ALDH1L1O75891 902 aa13.54□□□□□ -0.24
LPCAT4-208ENST00000569804 GJA8P48165 433 aa13.54□□□□□ -0.24
LPCAT4-208ENST00000569804 PPATQ06203 517 aa13.54□□□□□ -0.24
LPCAT4-208ENST00000569804 LRRC24Q50LG9 513 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms