RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 MBIPQ9NS73 344 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 RGS17Q9UGC6 210 aaPredicted RBP7.8□□□□□ -1.16
SMG1-217ENST00000569764 CSADQ9Y600 493 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 RGPD5Q99666 1765 aa7.8□□□□□ -1.16
SMG1-217ENST00000569764 USP54Q70EL1 1684 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 XIRP1Q702N8 1843 aaKnown RBP7.79□□□□□ -1.16
SMG1-217ENST00000569764 KIAA2012Q0VF49 1180 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 KCTD2Q14681 263 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 FAM161AQ3B820 660 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 NT5DC4Q86YG4 428 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 MIS18AQ9NYP9 233 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 GGA1Q9UJY5 639 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 FOSP01100 380 aaPredicted RBP7.79□□□□□ -1.16
SMG1-217ENST00000569764 TRIM27P14373 513 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 E2F4Q16254 413 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 PROM2Q8N271 834 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 SLC5A4Q9NY91 659 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 RECKO95980 971 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 ATP2B4P23634 1241 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 DNAJC10Q8IXB1 793 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 RAVER1Q8IY67 606 aaKnown RBP7.79□□□□□ -1.16
SMG1-217ENST00000569764 FLCNQ8NFG4 579 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 C22orf23Q9BZE7 217 aa7.79□□□□□ -1.16
SMG1-217ENST00000569764 B4DLN1 442 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 ERVV-1B6SEH8 477 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 IPO5O00410 1097 aaKnown RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 MRPL12P52815 198 aaKnown RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 ZNF287Q9HBT7 754 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 SNRKQ9NRH2 765 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 CWC25Q9NXE8 425 aaPredicted RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 STRCQ7RTU9 1775 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 NFAT5O94916 1531 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 CAPN2P17655 700 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 RPS12P25398 132 aaKnown RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 GSTO1P78417 241 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 ZCCHC8Q6NZY4 707 aaKnown RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 JAZF1Q86VZ6 243 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 DRC7Q8IY82 874 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 MRGBPQ9NV56 204 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 NOB1Q9ULX3 412 aaKnown RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 TBC1D2BQ9UPU7 963 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 COL14A1Q05707 1796 aaKnown RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 VAMP4O75379 141 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 MYL6BP14649 208 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 C1QTNF12Q5T7M4 302 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 RNF187Q5TA31 235 aaPredicted RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 USPL1Q5W0Q7 1092 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 ZNF790Q6PG37 636 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 LDHDQ86WU2 507 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 NBPF15Q8N660 670 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 PRPF38AQ8NAV1 312 aaKnown RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 SCYL1Q96KG9 808 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 POLR3EQ9NVU0 708 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 USP25Q9UHP3 1055 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 EVLQ9UI08 416 aaPredicted RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 TRPM3Q9HCF6 1732 aaPredicted RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 PPP1R12AO14974 1030 aaPredicted RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 SLC3A2P08195 630 aaKnown RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 MLLT3P42568 568 aaPredicted RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 IFIT5Q13325 482 aaKnown RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 MTHFSDQ2M296 383 aaKnown RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 UHMK1Q8TAS1 419 aaKnown RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 TMC2Q8TDI7 906 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 STAG1Q8WVM7 1258 aa7.78□□□□□ -1.16
SMG1-217ENST00000569764 NSFL1CQ9UNZ2 370 aaKnown RBP7.78□□□□□ -1.16
SMG1-217ENST00000569764 ZSCAN29Q8IWY8 852 aaPredicted RBP7.77□□□□□ -1.17
SMG1-217ENST00000569764 TBC1D22AQ8WUA7 517 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 ZNF512BQ96KM6 892 aaPredicted RBP7.77□□□□□ -1.17
SMG1-217ENST00000569764 NCAPD2Q15021 1401 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 USP34Q70CQ2 3546 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 CCDC175P0C221 793 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 G3BP1Q13283 466 aaKnown RBP eCLIP7.77□□□□□ -1.17
SMG1-217ENST00000569764 PDE3AQ14432 1141 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 DNAJC21Q5F1R6 531 aaKnown RBP7.77□□□□□ -1.17
SMG1-217ENST00000569764 CDC37L1Q7L3B6 337 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 BSDC1Q9NW68 430 aaPredicted RBP7.77□□□□□ -1.17
SMG1-217ENST00000569764 SCNN1AP37088 669 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 IREB2P48200 963 aaKnown RBP7.77□□□□□ -1.17
SMG1-217ENST00000569764 CCDC174Q6PII3 467 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 ZNF710Q8N1W2 664 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 PCDH12Q9NPG4 1184 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 ANO2Q9NQ90 1003 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 AKAP2Q9Y2D5 859 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 NR2E3Q9Y5X4 410 aa7.77□□□□□ -1.17
SMG1-217ENST00000569764 ECEL1O95672 775 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 JADE2Q9NQC1 790 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 SYNPO2Q9UMS6 1093 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 CEP83Q9Y592 693 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 IL16Q14005 1332 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 CBFA2T2O43439 604 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 GNAI3P08754 354 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 PAX7P23759 505 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 DEFB115Q30KQ5 88 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 SMAP1Q8IYB5 467 aaPredicted RBP7.76□□□□□ -1.17
SMG1-217ENST00000569764 PIGBQ92521 554 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 ANKRD33BA6NCL7 494 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 PLCG2P16885 1265 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 NOGQ13253 232 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 SMYD5Q6GMV2 418 aa7.76□□□□□ -1.17
SMG1-217ENST00000569764 ALKBH2Q6NS38 261 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms